New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3857518 =74 (0.990)8 (0.110) 7/248 NT 10.8% coding (52/231 nt) PP_3407 hypothetical protein
?NC_002947 3857549 = 60 (0.820)coding (83/231 nt) PP_3407 hypothetical protein

CAGCGATCGGCTTCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGCCCTTCAGCAGGGCC  >  NC_002947/3857370‑3857665
                                                                                                                                                    |                                                                                                                                                    
taccgttgcgggggcagcaccggcattgtccggccctgctgaagggcctgggacgcaccggtttcccgtttcaccccctgaggggcacctgaacgcgagtcataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGa                                                                                                                                                     >  1:1351417‑M1/149‑150 (MQ=255)
    gATCGGCTTCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCt                                                                                                                                                 >  1:1751410/1‑150 (MQ=255)
    gATCGGCTTCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGGTACTGCACTTCTACCTATTGGAAGAAGGCTGCGTGGCTGAGCCt                                                                                                                                                 >  2:576002/1‑150 (MQ=255)
           ttCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGc                                                                                                                                                   <  2:793112/141‑1 (MQ=255)
           ttCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGc                                                                                                                                                   >  1:793112/1‑141 (MQ=255)
                ccAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTAcc                                                                                                                                         >  1:90328/1‑146 (MQ=255)
                ccAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTAcc                                                                                                                                         <  2:90328/146‑1 (MQ=255)
                 cAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACctgctg                                                                                                                                    >  1:931289/1‑150 (MQ=255)
                    aaaCTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCCGGCCTGAGCTTGTCGTACCTGCTGTTc                                                                                                                                <  1:913791/150‑1 (MQ=255)
                    aaaCTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTc                                                                                                                                <  2:1508689/150‑1 (MQ=255)
                      aCTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGa                                                                                                                              <  1:777292/150‑1 (MQ=255)
                       cTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGAc                                                                                                                             <  1:993350/150‑1 (MQ=255)
                       cTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCCACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGAc                                                                                                                             <  1:1365257/150‑1 (MQ=255)
                        tGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACa                                                                                                                            <  1:1703032/150‑1 (MQ=255)
                        tGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCATGGGCCTGTCGTACCTGCTGTTCGACa                                                                                                                            <  1:1202718/150‑1 (MQ=255)
                           gggCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGcc                                                                                                                         <  1:622327/150‑1 (MQ=255)
                           gggCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGcc                                                                                                                         <  1:1670888/150‑1 (MQ=255)
                            tccggccctgctgaagggcctgggacgcaccggtttcccgtttcaccccctgaggggcacctgaacgcgaggcataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGAGCCTGTCGTACCTGCTGTTCGACAGcc                                                                                                                         >  2:468408‑M1/121‑149 (MQ=255)
                            tccggccctgctgaagggcctgggacgcaccggtttcccgtttcaccccctgaggggcacctgaacgcgaggcataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGAGCCTGTCGTACCTGCTGTTCGACAGcc                                                                                                                         <  1:468408‑M1/29‑1 (MQ=255)
                            ggCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCt                                                                                                                        >  1:1625807/1‑150 (MQ=255)
                              ccGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCg                                                                                                                      >  2:12431/1‑150 (MQ=255)
                               cGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGc                                                                                                                     >  1:913758/1‑150 (MQ=255)
                                   gcgcAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGc                                                                                                                 >  2:1430579/1‑150 (MQ=255)
                                    cgcAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCt                                                                                                                <  2:116118/150‑1 (MQ=255)
                                    cgcAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCGGTCGTACCTGCTGTTCGACAGCCTCGCACGCt                                                                                                                <  1:1314603/150‑1 (MQ=255)
                                     gcAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGc                                                                                                                                                   >  2:1857447/1‑115 (MQ=255)
                                     gcAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGc                                                                                                                                                   <  1:1857447/115‑1 (MQ=255)
                                      ctgaagggcctgggacgcaccggtttcccgtttcaccccctgaggggcacctgaacgcgaggcataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGa                                                                                                                                                     >  1:175231‑M1/111‑112 (MQ=255)
                                      ctgaagggcctgggacgcaccggtttcccgtttcaccccctgaggggcacctgaacgcgaggcataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGa                                                                                                                                                     <  2:175231‑M1/2‑1 (MQ=255)
                                      cAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGt                                                                                                              <  2:652405/150‑1 (MQ=255)
                                        ggATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAGGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTAt                                                                                                            >  1:1275624/1‑150 (MQ=255)
                                            gAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACa                                                                                                        <  1:1430579/150‑1 (MQ=255)
                                                 ggTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGCAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCGGTATGACATTGAc                                                                                                   >  2:1032020/1‑150 (MQ=255)
                                                 ggTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGAc                                                                                                   >  1:44860/1‑150 (MQ=255)
                                                  gTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACg                                                                                                  <  2:609389/150‑1 (MQ=255)
                                                     cgcTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCa                                                                                               >  1:1776890/1‑150 (MQ=255)
                                                        tACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCaa                                                                                              <  2:1350298/148‑1 (MQ=255)
                                                        tACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCaa                                                                                              >  1:1350298/1‑148 (MQ=255)
                                                                  aTGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTa                                                                                                                                           >  1:410775/1‑94 (MQ=255)
                                                                  aTGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTa                                                                                                                                           <  2:410775/94‑1 (MQ=255)
                                                                       gACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCtctc                                                                             >  1:1207999/1‑150 (MQ=255)
                                                                       gACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCtctc                                                                             >  1:1264705/1‑150 (MQ=255)
                                                                       gACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTCCTGTTCGACAGCCTCGCACGCTGTATCACATTGACTGAAAGCCCGCCCCATGCtctc                                                                             >  2:344448/1‑150 (MQ=255)
                                                                        aCAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTc                                                                                                                                <  1:1193644/98‑1 (MQ=255)
                                                                        aCAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTc                                                                                                                                >  2:1193644/1‑98 (MQ=255)
                                                                            gCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCACCCCATGCTCTCCTTAt                                                                        <  2:77869/150‑1 (MQ=255)
                                                                             cTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATg                                                                       >  1:1007754/1‑150 (MQ=255)
                                                                                 cggcATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTc                                                                   <  2:1007754/150‑1 (MQ=255)
                                                                                        cGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCa                                                            <  1:866741/150‑1 (MQ=255)
                                                                                         gCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTGTGGCATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAg                                                           <  2:739195/150‑1 (MQ=255)
                                                                                         gCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAg                                                           <  1:1417812/150‑1 (MQ=255)
                                                                                          cccGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAgg                                                          >  1:32676/1‑150 (MQ=255)
                                                                                          cccGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAgg                                                          >  1:1695577/1‑150 (MQ=255)
                                                                                           ccGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGCAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGt                                                         <  2:1176102/150‑1 (MQ=255)
                                                                                                ggTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGcccc                                                    >  2:580250/1‑150 (MQ=255)
                                                                                                 gTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCt                                                   >  2:131596/1‑150 (MQ=255)
                                                                                                 gTGATCGCCCGGTTTCTGCACTTCTGCCTGCTAGAAGAAGACTTCATTCCTGAGCCTGTCGTACCTGCTGGCCGACAGCCTCGAACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCt                                                   >  1:1077844/1‑150 (MQ=255)
                                                                                                    aTCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGACGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAg                                                <  2:1335398/150‑1 (MQ=255)
                                                                                                     tagcaccgTTGCTGCGCTTATGCCTGATGGAAGAAGACTTCAGGTCTGCGCATTTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTTAgg                                               <  2:447814/143‑1 (MQ=255)
                                                                                                     tCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAgg                                               >  1:61197/1‑150 (MQ=255)
                                                                                                     tCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAgg                                               <  1:1797103/150‑1 (MQ=255)
                                                                                                     ataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGAGCCTGTCGTACCTGCTGTTCGACAGCCTc                                                                                                                       >  2:1410699‑M1/48‑78 (MQ=255)
                                                                                                     ataaggagagcatggggcgggcttggcgtcaatgtcatacagcgtgcGAGCCTGTCGTACCTGCTGTTCGACAGCCTc                                                                                                                       <  1:1410699‑M1/31‑1 (MQ=255)
                                                                                                          cGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTg                                          >  2:1803393/1‑150 (MQ=255)
                                                                                                          cGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTg                                          >  1:464082/1‑150 (MQ=255)
                                                                                                                cTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACgg                                    <  1:580250/150‑1 (MQ=255)
                                                                                                                cTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACgg                                    <  1:1032020/150‑1 (MQ=255)
                                                                                                                 tGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACggg                                   >  2:577731/1‑150 (MQ=255)
                                                                                                                 tGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACggg                                   <  1:1527958/150‑1 (MQ=255)
                                                                                                                 tGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACggg                                   <  2:1776890/150‑1 (MQ=255)
                                                                                                                 tGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACggg                                   <  2:913758/150‑1 (MQ=255)
                                                                                                                      ttCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAAcc                              >  1:1420989/1‑150 (MQ=255)
                                                                                                                         tgcctgcTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           <  2:61197/150‑1 (MQ=255)
                                                                                                                         tgcctgcTGGAAGAAGACTTCAGGCCTGAGCCTGTAGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGGAACGGGAAACCGGt                           >  1:238593/1‑150 (MQ=255)
                                                                                                                            ctgctgGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGt                                                         >  1:359693/1‑117 (MQ=255)
                                                                                                                            ctgctgGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGt                                                         <  2:359693/117‑1 (MQ=255)
                                                                                                                             ggcgtcaatgtcatacagcgtgcGAGGCTGTCGAACAGCAGGTACGACAGGCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           <  1:746488‑M1/123‑1 (MQ=255)
                                                                                                                             ggcgtcaatgtcatacagcgtgcGAGGCTGTCGAACAGCAGGTACGACAGGCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           >  2:746488‑M1/24‑146 (MQ=255)
                                                                                                                                tgGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTccc                    >  1:1449970/1‑150 (MQ=255)
                                                                                                                                 ggAAGAAGACTTCAGGGCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCa                   <  2:95046/150‑1 (MQ=255)
                                                                                                                                 ggAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCAAACCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCa                   >  1:1060707/1‑150 (MQ=255)
                                                                                                                                  gaagaaGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAg                  >  2:646765/1‑150 (MQ=255)
                                                                                                                                   aagaagACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAgg                 <  2:1449970/150‑1 (MQ=255)
                                                                                                                                     gaagaCTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           >  2:64146/1‑138 (MQ=255)
                                                                                                                                     gaagaCTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           <  1:64146/138‑1 (MQ=255)
                                                                                                                                     gaagaCTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGcc               >  2:1101957/1‑150 (MQ=255)
                                                                                                                                          tacagcgtgcGAGGCTGTCGAACAGCAGGTACGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           >  2:172632‑M1/11‑133 (MQ=255)
                                                                                                                                          tacagcgtgcGAGGCTGTCGAACAGCAGGTACGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGt                           <  1:172632‑M1/123‑1 (MQ=255)
                                                                                                                                          cTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGTTTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGCCCTCca          <  1:1040276/150‑1 (MQ=255)
                                                                                                                                               ggCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGCCCTTCAGCAgg     <  2:44860/150‑1 (MQ=255)
                                                                                                                                                  cTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGCCCTTCAGCAGGGcc  >  1:900062/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CAGCGATCGGCTTCTACCAGAAACTGGGGGCCGAGGCGCAGGATGAGTGGGTGCGCTACCGGCTGGATGGCGACAAGCTGGCGGCATTCGCCCGCGGGTGATCGCCCGGTTTCTGCACTTCTGCCTGCTGGAAGAAGACTTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGTGCGTCCCAGGCCCTTCAGCAGGGCC  >  NC_002947/3857370‑3857665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.