New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5870317 =	60 (0.800)	3 (0.050)	3/196	NT	7.0%	intergenic (+22/+112)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	5870410 =	33 (0.570)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator

CCAGCCAGAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGC  >  NC_002947/5870168‑5870465                                                                                                                                                      |                                                                                                                                                     ccagccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCgg                                                                                                                                                      <  2:1847312/150‑1 (MQ=255) acagccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCgg                                                                                                                                                      >  2:1637238/2‑150 (MQ=255)  gccaaggaactgctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccgg                                                                                                                                                     <  1:356574‑M1/2‑1 (MQ=255)   agccagAATTACGGGACCCGGGCGAGCACAGTGATGATTGTGGATGATCAGGGGCAACGAAGGATGGTGGAGCAAAGGTTCAGATAAAATTGCAACCTTATGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGAAGTTGTCTGTTCGGGc                                                                                                                                                    >  1:432607/1‑150 (MQ=255)     aaggaactgctggccgaggccttgagccatgacaacccgcnggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCct                                                                                                                                                  <  1:1559188‑M1/5‑1 (MQ=255)     aaggaactgctggccgaggccttgagccatgacaacccgcaggttatccacagcgcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCct                                                                                                                                                  <  2:234087‑M1/5‑1 (MQ=255)      cagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCgg                                                                                                                                                      >  2:1817469/1‑145 (MQ=255)      cagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCgg                                                                                                                                                      <  1:1817469/145‑1 (MQ=255)           ttccGGGACCCGGACGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAGGGCTGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTcgc                                                                                                                                            >  2:1506627/4‑150 (MQ=255)            tgctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTcgcg                                                                                                                                           <  2:843774‑M1/12‑1 (MQ=255)            tgctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgacaatacccctgaagaaccttcggtttgcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTcgcg                                                                                                                                           <  1:706127‑M1/12‑1 (MQ=255)             gctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccctggctcggcgcggatcatttggcggggttctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCgg                                                                                                                                          >  1:234087‑M1/138‑150 (MQ=255)             aCGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGAACAATCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCgg                                                                                                                                          <  1:1554623/150‑1 (MQ=255)                 gACCCGGGCGAGCACAGTGCTGATTGTGGATTATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTTGCGGGTGa                                                                                                                                      >  2:1045974/1‑150 (MQ=255)                   cccGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAc                                                                                                                                    <  2:513276/150‑1 (MQ=255)                       ggCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGc                                                                                                                                <  2:1583064/150‑1 (MQ=255)                       gccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGc                                                                                                                                >  1:738791‑M1/128‑150 (MQ=255)                         cttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgttccGGCCTCTTCGCGGGTGAACCCGCTc                                                                                                                              >  1:386527‑M1/126‑150 (MQ=255)                         cGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTc                                                                                                                              <  2:304664/150‑1 (MQ=255)                          ttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTTCACccgcgaa                                                                                                                             >  2:1588550‑M1/125‑147 (MQ=255)                            gCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTa                                                                                                                           >  2:1001575/1‑150 (MQ=255)                              acaGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACa                                                                                                                         >  1:1461068/1‑150 (MQ=255)                                aGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAAc                                                                                                                       <  1:1414638/150‑1 (MQ=255)                                 gTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCgg                                                                                                                                          <  2:844398/130‑1 (MQ=255)                                 gTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCgg                                                                                                                                          >  1:844398/1‑130 (MQ=255)                                      gATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTg                                                                                                                 >  1:491147/1‑150 (MQ=255)                                      aacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCgg                                                                                                                                          >  2:1071108‑M1/113‑125 (MQ=255)                                      aacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCgg                                                                                                                                          <  1:1071108‑M1/13‑1 (MQ=255)                                       aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg                                                                                                                <  2:432607/150‑1 (MQ=255)                                       aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg                                                                                                                <  1:923982/150‑1 (MQ=255)                                          gtgGATGATGAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTc                                                                                                             <  2:1237666/150‑1 (MQ=255)                                          gtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTGTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGGCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTc                                                                                                             <  2:233077/150‑1 (MQ=255)                                             gatgatCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCGCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCaa                                                                                                          >  2:297307/1‑150 (MQ=255)                                                        gCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTc                                                                                                                              <  2:1073978/119‑1 (MQ=255)                                                        gCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTc                                                                                                                              >  1:1073978/1‑119 (MQ=255)                                                        gCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTAGGGCCTATTCGCTGGTTAACTTTCTTCTTCAATTGTTTGGGTCCAACCCCAGAtgtg                                                                                               >  2:1754446/1‑150 (MQ=255)                                                         cAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGGCATGGGTACAACCACAGAagtgt                                                                                              <  2:1461068/150‑1 (MQ=39)                                                         cAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgt                                                                                              <  2:1532320/150‑1 (MQ=255)                                                          aaaNGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgtg                                                                                             >  2:1199612/1‑150 (MQ=255)                                                                     gTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAgg                                                                                  >  2:706127/1‑150 (MQ=255)                                                                          gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCgg                                                                                                                                          >  2:1768708/1‑89 (MQ=255)                                                                          gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCgg                                                                                                                                          <  1:1768708/89‑1 (MQ=255)                                                                          gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCgg                                                                             <  1:261071/150‑1 (MQ=255)                                                                          gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCgg                                                                             <  2:1878005/150‑1 (MQ=255)                                                                          ctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCgg                                                                             >  1:11727‑M1/77‑150 (MQ=255)                                                                            gcggTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTCTTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTCAACCCGCTCCTACAACGGCCTCGGTCCAACCCCAGATGTGTGTACGTGGTAGGCGCGGGt                                                                           >  2:356574/4‑150 (MQ=38)                                                                             cAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCgg                                                                             <  2:851356/147‑1 (MQ=255)                                                                             cAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCgg                                                                             >  1:851356/1‑147 (MQ=255)                                                                                tttCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCAc                                                                       <  2:491147/150‑1 (MQ=255)                                                                                tttCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCAc                                                                       <  1:1754446/150‑1 (MQ=255)                                                                                       ccTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCa                                                                                                     <  2:456896/113‑1 (MQ=255)                                                                                       ccTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCa                                                                                                     >  1:456896/1‑113 (MQ=255)                                                                                         ttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCggg                                                                            >  2:700442‑M1/62‑136 (MQ=255)                                                                                         ttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCggg                                                                            <  1:700442‑M1/75‑1 (MQ=255)                                                                                             ggCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGcc                                                          <  1:1637238/150‑1 (MQ=255)                                                                                              gCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                         <  1:1284837/150‑1 (MQ=255)                                                                                               cGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACAAGCTCTTACAAAGGCATGCTTCCTTCCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                        <  1:1179449/150‑1 (MQ=255)                                                                                                     tttGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACaaa                                                  >  2:210162/1‑150 (MQ=255)                                                                                                          gggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCa                                             <  1:210162/150‑1 (MQ=255)                                                                                                               aTTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGc                                                                                                                    <  2:1141314/74‑1 (MQ=255)                                                                                                               aTTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGc                                                                                                                    >  1:1141314/1‑74 (MQ=255)                                                                                                                 tGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCt                                      >  2:745923/1‑150 (MQ=255)                                                                                                                      tgttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGATCCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTCGGCGGTCCTGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAg                                 <  1:1078202/150‑1 (MQ=38)                                                                                                                       gttgGTCTGAGTATTTGATGTTGTCTTTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCAAACCCCAGATGTGTGTACGTGGTAGGAGCGGCGTCACCCGCGAAGAGGCCGGCACAAACAGCATCACACTCACAgg                                >  1:729523/1‑150 (MQ=38)                                                                                                                        ttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgt                                                                                              >  1:1080138/1‑87 (MQ=255)                                                                                                                        ttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgt                                                                                              <  2:1080138/87‑1 (MQ=255)                                                                                                                           gTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGttt                            >  1:728007/1‑150 (MQ=255)                                                                                                                             cTGGGTATTTGACGTTGTCTGTCCGGGCCTCTTCGCGGGTGACCCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTtta                          <  2:831521/150‑1 (MQ=38)                                                                                                                             cTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTtta                          <  1:1545429/150‑1 (MQ=255)                                                                                                                              tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttat                         <  1:1045974/150‑1 (MQ=255)                                                                                                                              tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAt                                                                                                  >  2:713092/1‑77 (MQ=255)                                                                                                                              tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAt                                                                                                  <  1:713092/77‑1 (MQ=255)                                                                                                                              tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttat                         >  2:1571265/1‑150 (MQ=255)                                                                                                                                  tATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGc                     >  1:1886774/1‑150 (MQ=255)                                                                                                                                    tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGGCTGGGTCCAACCCCAGATCTGTATGCCCGGCAATAAGGTGTTCACCCGCGAAAAGGCCGGCACAAACAGCATCCCCCTCACAGGGTGTTATTAGccc                   >  2:825953/1‑150 (MQ=25)                                                                                                                                    tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgt                                                                                                >  1:318723/1‑73 (MQ=255)                                                                                                                                    tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgt                                                                                                <  2:318723/73‑1 (MQ=255)                                                                                                                                    tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGccc                   >  2:650062/1‑150 (MQ=255)                                                                                                                                      tGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTACGGAGTTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCa                 >  1:603855/1‑150 (MQ=38)                                                                                                                                                 gTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAg                                                                                   <  1:131404/73‑1 (MQ=255)                                                                                                                                                 gTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAg                                                                                   >  2:131404/1‑73 (MQ=255)                                                                                                                                                  ttCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAatcatc     >  1:1689207/1‑150 (MQ=255)                                                                                                                                                     gggCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTa                                                                                    >  1:1847960/1‑68 (MQ=255)                                                                                                                                                     gggCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTa                                                                                    <  2:1847960/68‑1 (MQ=255)                                                                                                                                                     gggCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCcgc  <  1:1199612/150‑1 (MQ=255)                                                                                                                                                      GGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGc                                                                               >  1:1329127‑M1/1‑72 (MQ=255)                                                                                                                                                      GGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGc                                                                               <  2:1329127‑M1/72‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CCAGCCAGAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGC  >  NC_002947/5870168‑5870465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.