New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1899260 =	66 (0.880)	9 (0.140)	5/224	NT	13.7%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	55 (0.840)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase

TCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT  >  NC_002947/1899171‑1899468                                                                                                                                                      |                                                                                                                                                     tCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGCGGGAGCGGGCa                                                                                                                                                      >  1:607937/1‑150 (MQ=255)  cATGCTTGAAATTGCCCCAGCAACGTGTTTATGAGCATAAGGTTCCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCAt                                                                                                                                                     <  1:381/150‑1 (MQ=38)      cTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGccc                                                                                                                                                 >  2:1388371/1‑150 (MQ=255)                ccccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                                                                                       <  2:607937/150‑1 (MQ=255)                  ccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     >  1:54610/1‑150 (MQ=255)                  ccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     >  1:412493/1‑150 (MQ=255)                  ccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     >  1:1226937/1‑150 (MQ=255)                  ccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     <  1:235519/150‑1 (MQ=255)                  ccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     >  2:235519/1‑150 (MQ=255)                   cAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCgg                                                                                                                                    >  1:1081495/1‑150 (MQ=255)                   cAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCCGTGGGAGCGGGCATGCCCGCGAAAGGGCCgg                                                                                                                                    >  2:23816/1‑150 (MQ=255)                       aaaGCGCCTGGGATCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGtata                                                                                                                                <  1:447243/150‑1 (MQ=255)                       aaaGCGCCTGGGATCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGtata                                                                                                                                >  2:447243/1‑150 (MQ=255)                            gcCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATAACTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                           <  1:1620120/150‑1 (MQ=255)                              cTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGcc                                                                                                                         >  1:1163818/1‑150 (MQ=255)                              cTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGcc                                                                                                                         >  1:1269116/1‑150 (MQ=255)                                 ggAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAt                                                                                                                      <  1:734352/150‑1 (MQ=255)                                 ggAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAt                                                                                                                      <  2:26070/150‑1 (MQ=255)                                    gCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCGGTGATTTTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATaaa                                                                                                                   <  1:328912/150‑1 (MQ=255)                                    gCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATaaa                                                                                                                   <  2:1269116/150‑1 (MQ=255)                                    gCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATaaa                                                                                                                   <  1:1273667/150‑1 (MQ=255)                                         aGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                              >  1:1778619/1‑150 (MQ=255)                                         aGGTTGCCACCGCATGGTGCGTAACCTGTGCACACCAGATCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                              <  1:1039779/150‑1 (MQ=39)                                               ccACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     >  2:209660/1‑121 (MQ=255)                                               ccACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                     <  1:209660/121‑1 (MQ=255)                                                cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                       >  2:786791/1‑150 (MQ=255)                                                cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                       >  2:56548/1‑150 (MQ=255)                                                 aCCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAcc                                                                                                      >  1:1160407/1‑150 (MQ=255)                                                     cATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCAt                                                                                                  >  1:545982/1‑150 (MQ=255)                                                               aaCCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCACTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGt                                                                                        >  2:914166/1‑150 (MQ=255)                                                                  cggtgCAGGCCTCTTCGCGGGCCCGCCCGCTCGCACAGGTACGGCGCCGCCCTCAGGCCATGAGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCTTCCCGGGCTGTCaa                                                                                     <  2:576331/148‑1 (MQ=37)                                                                        aGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGa                                                                               >  1:1520610/1‑150 (MQ=255)                                                                        aGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGACCTTGCGATATCCCTGTGGGAGCGGACATGCCCGCGAAAGGGCCGGTATAGCGGGCCCATAAATTGCTGATCTACCTCATACCGGGCTGTCAACGTCgc                                                                               >  1:573267/1‑149 (MQ=255)                                                                          gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACa                                                                             >  1:478086/1‑150 (MQ=255)                                                                            ctctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGc                                                                           >  2:3342/1‑150 (MQ=255)                                                                            ctctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGc                                                                           >  1:547332/1‑150 (MQ=255)                                                                               ttCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGccc                                                                                                                                                 >  2:937041/1‑77 (MQ=255)                                                                               ttCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGccc                                                                                                                                                 <  1:937041/77‑1 (MQ=255)                                                                                tCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCGACGTTGACAGcccgg                                                                       <  2:1226937/150‑3 (MQ=255)                                                                                  gcgGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTcac                                                                     <  1:1855436/150‑1 (MQ=255)                                                                                        aCGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTc                                                               >  1:8927/1‑150 (MQ=255)                                                                                          GCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGcc                                                                                                                         >  2:1744680‑M1/1‑90 (MQ=255)                                                                                          GCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGcc                                                                                                                         <  1:1744680‑M1/90‑1 (MQ=255)                                                                                            ccgctcccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGa                                                           >  1:655508‑M2/59‑150 (MQ=255)                                                                                              gctcccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACa                                                         >  1:764606‑M2/57‑150 (MQ=255)                                                                                                  ccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGccc                                                                                                                        >  2:995686‑M2/53‑83 (MQ=255)                                                                                                  ccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGccc                                                                                                                        <  1:995686‑M2/31‑1 (MQ=255)                                                                                                   cacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGgc                                                    <  2:655508‑M2/99‑1 (MQ=255)                                                                                                   CACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGgc                                                    >  1:786791‑M1/1‑150 (MQ=255)                                                                                                   CACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGgc                                                    <  1:1810299‑M1/150‑1 (MQ=255)                                                                                                    ACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTc                                                                       >  2:185704‑M1/1‑130 (MQ=255)                                                                                                    ACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTc                                                                       <  1:185704‑M1/130‑1 (MQ=255)                                                                                                      aggtggtGCGCCGCGCTCTGGCTTGGCGCTATCCGAGTGGGGGCGGGCATGCGCGCGAAAGGGCCGGTATAGCTGGCACATAACTTGCTGATCTACCTCATCCAGGGCTGTCAACGTCGACAGCTCTCACCACTTCACGACAAAGGCGcc                                                 <  2:7924/144‑1 (MQ=255)                                                                                                            tGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTg                                           >  1:1713318/1‑150 (MQ=255)                                                                                                              cgccgcCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGcc                                         <  1:1388371/150‑1 (MQ=255)                                                                                                              cgccgcCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGcc                                         <  2:54610/150‑1 (MQ=255)                                                                                                                ccgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGcccc                                       >  1:293761/1‑150 (MQ=255)                                                                                                                 cgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                           >  2:306040/1‑65 (MQ=255)                                                                                                                 cgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                           <  1:306040/65‑1 (MQ=255)                                                                                                                 cgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCg                                      <  2:1081495/150‑1 (MQ=255)                                                                                                                 cgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCg                                      >  2:297593/1‑150 (MQ=255)                                                                                                                 aaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTc                                                                                                    <  2:1925985‑M2/51‑1 (MQ=255)                                                                                                                 aaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTc                                                                                                    >  1:1925985‑M2/38‑88 (MQ=255)                                                                                                                 aaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCggg                                                                                            >  2:561067‑M2/38‑96 (MQ=255)                                                                                                                 aaggcctgagggcggcgcagtacctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCggg                                                                                            <  1:561067‑M2/59‑1 (MQ=255)                                                                                                                   cccTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCt                                    >  2:1381050/1‑150 (MQ=255)                                                                                                                        aGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCAt                               <  1:914166/150‑1 (MQ=255)                                                                                                                          gCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATaaa                                                                                                                   <  2:741580/64‑1 (MQ=255)                                                                                                                          gCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATaaa                                                                                                                   >  1:741580/1‑64 (MQ=255)                                                                                                                          gCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCa                             <  2:8927/150‑1 (MQ=255)                                                                                                                            cTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGc                           >  1:1897299/1‑150 (MQ=255)                                                                                                                             ttGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCa                          >  1:1884270/1‑150 (MQ=255)                                                                                                                                   tatCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGAc                                                                              >  1:59865/1‑92 (MQ=255)                                                                                                                                   tatCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGAc                                                                              <  2:59865/92‑1 (MQ=255)                                                                                                                                     tCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCgggg                  >  1:1866866/1‑150 (MQ=255)                                                                                                                                       cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCa                >  2:309496‑M2/16‑150 (MQ=255)                                                                                                                                       cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCa                >  2:13245‑M2/16‑150 (MQ=255)                                                                                                                                       cctgtcggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATGGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTACCCCGCTTGCATCACCATGCCGGGGCa                >  2:13013‑M2/16‑150 (MQ=255)                                                                                                                                        ctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAg               >  1:1161222‑M2/15‑150 (MQ=255)                                                                                                                                         tgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGCTCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGc              >  1:1781290‑M2/14‑150 (MQ=255)                                                                                                                                         tgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGc              >  2:901208‑M2/14‑150 (MQ=255)                                                                                                                                           ctttcgcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACaa                                                        >  2:446156‑M2/12‑106 (MQ=255)                                                                                                                                           ctttcgcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACaa                                                        <  1:446156‑M2/95‑1 (MQ=255)                                                                                                                                           ctttcgcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCg            >  2:1498057‑M2/12‑150 (MQ=255)                                                                                                                                            gggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCgg           <  2:478086‑M2/140‑1 (MQ=255)                                                                                                                                             ggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCTCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACTTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgc          <  1:601069‑M2/141‑1 (MQ=255)                                                                                                                                              gagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgcg         >  2:547479‑M2/9‑150 (MQ=255)                                                                                                                                              gagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgcg         >  2:305118‑M2/9‑150 (MQ=255)                                                                                                                                                gcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGcc       <  2:231971‑M2/144‑1 (MQ=255)                                                                                                                                                     cATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCCCGACAAAGGCGCCGTGTTGCCCCGCTTGCATCGGCATGCCGGGGCAGCCGGCGCCttttt  <  2:1163818‑M2/149‑1 (MQ=255)                                                                                                                                                     cATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCttttt  <  2:1778619‑M2/149‑1 (MQ=255)                                                                                                                                                      aTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAg                                                      <  1:191753/97‑1 (MQ=255)                                                                                                                                                      aTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAg                                                      >  2:191753/1‑97 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT  >  NC_002947/1899171‑1899468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.