New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 519644080 (1.070)5 (0.070) 5/234 NT 6.1% coding (123/690 nt) ybgJ allophanate hydrolase subunit 1
?NC_002947 = 5196465 81 (1.180)coding (98/690 nt) ybgJ allophanate hydrolase subunit 1

TGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGA  >  NC_002947/5196320‑5196612
                                                                                                                                                 |                                                                                                                                                   
tgtgTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCCTCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggc                                                                                                                                                 <  1:1367731‑M2/150‑5 (MQ=255)
  tgtCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTTGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcga                                                                                                                                               >  2:991715‑M2/1‑144 (MQ=255)
  tgtCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcga                                                                                                                                               >  2:353367‑M2/1‑144 (MQ=255)
      aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcat                                                                                                                                           >  1:490759‑M2/1‑140 (MQ=255)
      aGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcat                                                                                                                                           >  1:490508‑M2/1‑140 (MQ=255)
       ggCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATc                                                                                                                                          <  2:1596260/150‑1 (MQ=255)
       ggCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATc                                                                                                                                          <  2:1566389/150‑1 (MQ=255)
          tGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCAt                                                                                                                                       >  2:499737/1‑150 (MQ=255)
            cAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCACATGCTCGCCGAACGTCGCGTTCGAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                                                     <  2:1657068/150‑1 (MQ=255)
            cAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                                                     <  2:821072/150‑1 (MQ=255)
             aaGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGc                                                                                                                                    >  1:999212/1‑150 (MQ=255)
                  gTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGtt                                                                                                                               <  1:507884/150‑1 (MQ=255)
                     cAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                            <  2:1426145/150‑1 (MQ=255)
                     cAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                            >  2:1308489/1‑150 (MQ=255)
                     cAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                            <  1:1513588/150‑1 (MQ=255)
                     cAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTCCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGAc                                                                                                                            <  2:999212/150‑1 (MQ=255)
                      aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                                                     <  1:1351015/140‑1 (MQ=255)
                      aGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATgg                                                                                                                                     >  2:1351015/1‑140 (MQ=255)
                          ccTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCAt                                                                                                                       <  1:725652/150‑1 (MQ=255)
                           cTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATc                                                                                                                      <  1:1023592/150‑1 (MQ=255)
                            tGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCg                                                                                                                     >  1:1610099/1‑150 (MQ=255)
                              aGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGAt                                                                                                                   <  2:745139/150‑1 (MQ=255)
                               gCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATa                                                                                                                  >  1:1801778/1‑150 (MQ=255)
                               gCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATa                                                                                                                  <  2:44454/150‑1 (MQ=255)
                                cGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCCCCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCCTCCATGGCATGTTGTCCTCATCGATAc                                                                                                                 >  1:266568/1‑150 (MQ=255)
                                 gATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACg                                                                                                                <  1:738576/150‑1 (MQ=255)
                                  aTTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                                               >  1:1291113/1‑150 (MQ=255)
                                  aTTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACATGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACgg                                                                                                               <  2:566446/150‑1 (MQ=255)
                                      gcgcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATc                                                                                                                      >  2:1905979/1‑139 (MQ=255)
                                      gcgcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATc                                                                                                                      <  1:1905979/139‑1 (MQ=255)
                                        gcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGtt                                                                                                                               >  2:1378513/1‑128 (MQ=255)
                                        gcCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGtt                                                                                                                               <  1:1378513/128‑1 (MQ=255)
                                          ccTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAg                                                                                                       >  2:1812851/1‑150 (MQ=255)
                                           cTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAgg                                                                                                      >  2:1066714/1‑150 (MQ=255)
                                            tGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGc                                                                                                     <  2:317100/150‑1 (MQ=255)
                                                    ccTGGCGCGAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCGCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATc                                                                                             <  2:767592/150‑1 (MQ=255)
                                                     cTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCa                                                                                            <  2:142909/150‑1 (MQ=255)
                                                               ggCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGAt                                                                                  >  1:1727692/1‑150 (MQ=255)
                                                                   gACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCg                                                                              <  1:1308489/150‑1 (MQ=255)
                                                                    aCTGCACCATCAGCGTAGTATAAGACGGCACCGGGTCTCACGAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGa                                                                             <  1:1453319/150‑1 (MQ=255)
                                                                    aCTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCGTTGAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGa                                                                             <  1:1453393/150‑1 (MQ=255)
                                                                      tGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGAcc                                                                           >  2:120634/1‑150 (MQ=255)
                                                                          ccATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACtt                                                                       <  1:1758783/150‑1 (MQ=255)
                                                                           cATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                                                 <  2:183975/139‑1 (MQ=255)
                                                                           cATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATg                                                                                 >  1:183975/1‑139 (MQ=255)
                                                                           cATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGAcacgaga                                                                      <  2:1081679/150‑7 (MQ=255)
                                                                               aGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCAt                                                                                                                       >  2:749082/1‑97 (MQ=255)
                                                                               aGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCAt                                                                                                                       <  1:749082/97‑1 (MQ=255)
                                                                               aGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGAtt                                                                  <  1:1445700/150‑1 (MQ=255)
                                                                                 cGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCGAGACAAGGCCGGCGGCGAGCGCGCAGGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcg                                                                >  1:232179/1‑150 (MQ=255)
                                                                                  gtagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                               <  1:1880385/150‑1 (MQ=255)
                                                                                  gtagtaTAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTcgc                                                               <  2:1291113/150‑1 (MQ=255)
                                                                                     gtaTAAGACGGCACCAGGCCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCGTGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGc                                                            <  1:333265/150‑1 (MQ=255)
                                                                                       ataAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                                                >  2:472702/1‑128 (MQ=255)
                                                                                       ataAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATgg                                                                                <  1:472702/128‑1 (MQ=255)
                                                                                       ataAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCtt                                                          <  1:1812851/150‑1 (MQ=255)
                                                                                       ataAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCtt                                                          <  2:1610099/150‑1 (MQ=255)
                                                                                           gACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGaa                                                                                                          >  2:82923/1‑98 (MQ=255)
                                                                                           gACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGaa                                                                                                          <  1:82923/98‑1 (MQ=255)
                                                                                            aCGGCACCAGGTCCAGCACATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTtcatca                                                     <  2:624267/150‑1 (MQ=255)
                                                                                              ggCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATcaca                                                   >  1:335107/1‑150 (MQ=255)
                                                                                                cACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACAcc                                                 >  1:754662/1‑150 (MQ=255)
                                                                                                 aCCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcatctgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggccagggcgcgaatcgctcaggcgctgg                                                <  1:1089370‑M2/150‑102 (MQ=255)
                                                                                                 aCCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCt                                                >  2:711591/1‑150 (MQ=255)
                                                                                                  ccAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTc                                               >  2:537905/1‑150 (MQ=255)
                                                                                                   cAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTcc                                              >  2:703895/1‑150 (MQ=255)
                                                                                                      gTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGc                                           >  1:1379302/1‑150 (MQ=255)
                                                                                                      gTCCAGCAAATGCTCGCCGAACGACGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCAGCGATACGGTTGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTACAGc                                           >  2:949544/1‑150 (MQ=255)
                                                                                                       tCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGcc                                          >  1:1523754/1‑150 (MQ=255)
                                                                                                         cAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCAGCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCATACCTCCAGcccc                                        >  2:1054183/1‑149 (MQ=255)
                                                                                                          aGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCAt                                       >  2:1466033/1‑150 (MQ=255)
                                                                                                          aGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCAt                                       >  1:993805/1‑150 (MQ=255)
                                                                                                           gCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggcca                                                                        >  2:89545‑M2/1‑39 (MQ=255)
                                                                                                           gCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgatggtgcagtctgccctggcgccaggcgaggcca                                                                        <  1:89545‑M2/116‑78 (MQ=255)
                                                                                                           gCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATc                                      >  2:1287980/1‑150 (MQ=255)
                                                                                                            cAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgat                                                                                                        <  2:1028972‑M2/83‑46 (MQ=255)
                                                                                                            cAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGcggcgagcatttgctggacctggtgccgtcttatactacgctgat                                                                                                        >  1:1028972‑M2/1‑38 (MQ=255)
                                                                                                              aaTGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAg                                   <  2:1379302/150‑1 (MQ=255)
                                                                                                               aTGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAgg                                  <  2:335107/150‑1 (MQ=255)
                                                                                                                   tCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt                              >  2:161390/1‑150 (MQ=255)
                                                                                                                   tCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt                              >  1:567007/1‑150 (MQ=255)
                                                                                                                   tCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCt                              <  1:1073524/150‑1 (MQ=255)
                                                                                                                    cGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTAATCGATATGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTg                             <  2:58259/150‑1 (MQ=255)
                                                                                                                      ccGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGc                           >  1:1924500/1‑150 (MQ=255)
                                                                                                                               gcgcTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCg                                                                                                            >  2:1491858/1‑60 (MQ=255)
                                                                                                                               gcgcTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCg                                                                                                            <  1:1491858/60‑1 (MQ=255)
                                                                                                                               gcgcTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGcc                  <  1:537905/150‑1 (MQ=255)
                                                                                                                                   tCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTg                                                                                       >  1:365437/1‑77 (MQ=255)
                                                                                                                                   tCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTg                                                                                       <  2:365437/77‑1 (MQ=255)
                                                                                                                                     aaGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGcc                                          <  2:259135/120‑1 (MQ=255)
                                                                                                                                     aaGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGcc                                          >  1:259135/1‑120 (MQ=255)
                                                                                                                                         gcCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTAcc                                                                                                >  2:167987/1‑62 (MQ=255)
                                                                                                                                         gcCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTAcc                                                                                                <  1:167987/62‑1 (MQ=255)
                                                                                                                                         gcCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGTGCCGGGCGAATCTGCCGCACcgccgc        >  2:1680301/1‑150 (MQ=255)
                                                                                                                                               tGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCTATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGa  >  1:1555568/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
TGTGTCAGGCTGCAAGCCGTCCAGCGCCTGAGCGATTCGCGCCCTGGCCTCGCCTGGCGCCAGGGCAGACTGCACCATCAGCGTAGTATAAGACGGCACCAGGTCCAGCAAATGCTCGCCGAACGCCGCGCTCAAGCGCCGGCTGGCGGCGAGCATCCATGGCATGTTGACCTCATCGATACGGTCGAACAGGCGTACCATCAGGCTGTCGATGGCGACCACTTCGATTCGCGGCTTCATCACACCTCCAGCCCATCGAGGGCCTGGCGAATCTGCCGCACCGCCGCCACCGA  >  NC_002947/5196320‑5196612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.