| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,936,675 | G→C | 8.1% | intergenic (‑41/‑377) | flhA ← / → PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,936,675 | 0 | G | C | 8.1% | 221.7 / 10.2 | 75 | intergenic (‑41/‑377) | flhA/PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (31/37); new base C (3/3); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.58e-01 | |||||||||||
CATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTA > NC_002947/4936527‑4936820 | catcatcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGgcgc > 2:1266092/1‑150 (MQ=35) tcatTGCCAACATCACCAGCAGCACCAGCGGAACCCCAAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTggg > 1:42177/1‑150 (MQ=255) atTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCg < 2:1572259/150‑1 (MQ=255) ccAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGAGGGCGCCGGGGCGTGGc > 2:606928/1‑150 (MQ=255) cAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCGtcaaa < 2:1021340/150‑5 (MQ=11) aTCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGc > 2:1415597/1‑150 (MQ=255) cagcagCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaagaa < 2:667230/150‑1 (MQ=255) cagcagCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCCGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaagaa > 1:234496/1‑150 (MQ=255) agcagcAACAGCGGCACCCCCAGCTTGCCCCGGCCGATCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAGCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaagaag < 2:714568/150‑1 (MQ=255) gggactgCGGCACCCCCACCTTGCCCCGGCCCAGACAGGCCCGGTTGGAGCGGGTGTTGCTGAGGAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCttt < 2:1755387/144‑1 (MQ=17) gcaACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCttt > 1:1577943/1‑150 (MQ=255) caACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTc > 1:810297/1‑150 (MQ=255) aaCAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTcc < 1:324823/150‑1 (MQ=255) aGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAAc < 2:1628520/150‑1 (MQ=255) aGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAAc < 2:1433667/150‑1 (MQ=255) cACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTgg < 1:560301/150‑1 (MQ=255) cACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTgg < 1:41514/150‑1 (MQ=255) aCCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGc < 2:1564405/150‑1 (MQ=255) ccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAg > 2:966240/1‑150 (MQ=255) ccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAg > 2:968979/1‑150 (MQ=255) gTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGAGATCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACAccc > 1:680719/1‑150 (MQ=255) cttGCCCCCGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGACCCACCGCGAGTCCTCTTGATGAAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTAGGCAGACAccc > 2:652613/2‑150 (MQ=255) gCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca < 1:1266092/150‑1 (MQ=255) ccccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACttt > 2:437176/1‑135 (MQ=255) ccccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACttt < 1:437176/135‑1 (MQ=255) cctggCCGGGCTCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 1:1389637/4‑150 (MQ=255) ggCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaaa < 1:898420/150‑1 (MQ=255) gCCGAGCCCGAAAAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaaaa < 1:390716/150‑1 (MQ=255) cccGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGaa > 1:835555/1‑150 (MQ=255) ccGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAAc < 1:722620/150‑1 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg < 2:141168/150‑1 (MQ=255) ttgttgCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGc > 1:1029057/1‑150 (MQ=255) ggCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACcgc < 2:1902290/150‑1 (MQ=255) cGTTGCTGATTAACTGAGTGCGATGCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGTGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAACGATGAACCGGGCGAGCACCACCGCGt < 2:965439/150‑1 (MQ=255) cGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGt < 2:1029057/150‑1 (MQ=255) gTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAATCGGGCGAGCACCACCGCGtt < 1:966240/150‑1 (MQ=255) gTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGtt < 1:968979/150‑1 (MQ=255) ttGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaaa < 1:754555/121‑1 (MQ=255) ttGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaaa > 2:754555/1‑121 (MQ=255) tGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACg < 2:1798689/149‑1 (MQ=255) tGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACg > 1:1798689/1‑149 (MQ=255) gATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACggg > 1:999000/1‑150 (MQ=255) tGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCa > 1:1718320/1‑150 (MQ=255) gAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCAt < 2:999000/150‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGCACCGGGCGAGCACCACCGCGCTGACGGGTGGCTCATGagcaa < 1:1030659/150‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt > 1:12593/1‑137 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt < 2:12593/137‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 2:1718320/150‑1 (MQ=255) gATACAACGAGAGTCTTCTTGTTCCAAAACTTTGACGCCCAGGGGGCGTCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACAAAACTATTGATACATGATCCGAGCGAGCACCACCGCGTTGACTTGTGGCTCATGagcat < 2:266428/150‑2 (MQ=16) aTCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCAAAACCGCGTTGACGGGTGGCTCATGagcaag < 1:817084/150‑1 (MQ=255) aCCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAAt > 2:1288988/1‑150 (MQ=255) gTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTgg < 2:1739514/127‑1 (MQ=255) gTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTgg > 1:1739514/1‑127 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc < 1:564315/100‑1 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc > 2:564315/1‑100 (MQ=255) ttGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAAc < 2:1389637/150‑1 (MQ=255) gATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACga < 1:664742/150‑1 (MQ=255) aTGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACtag < 1:1508268/150‑1 (MQ=255) cAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTgg < 1:1130711/61‑1 (MQ=255) cAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTgg > 2:1130711/1‑61 (MQ=255) cAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGAcc > 1:915133/1‑150 (MQ=255) cAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGAcc > 2:570099/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:1618588/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:5740/1‑150 (MQ=255) aaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc < 2:1388656/89‑1 (MQ=255) aaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc > 1:1388656/1‑89 (MQ=255) aaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTcc > 1:1721068/1‑150 (MQ=255) tttGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGc > 1:1393288/1‑150 (MQ=255) tGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGccc < 2:810297/150‑1 (MQ=255) aCGCCCAGGCGCCCCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa > 2:353651/1‑116 (MQ=255) aCGCCCAGGCGCCCCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 1:353651/116‑1 (MQ=255) aCGCCCAGGCGCCCCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 1:156040/1‑150 (MQ=255) aCGCCCAGGCGCCCCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 2:554720/1‑150 (MQ=255) cGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAAt < 1:1099255/150‑1 (MQ=255) cAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGcc > 1:1816731/1‑150 (MQ=255) gggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTa > 1:1378116/1‑150 (MQ=255) | CATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTA > NC_002947/4936527‑4936820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |