| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,956,638 | C→A | 5.5% | V54V (GTG→GTT) | fliI ← | flagellum‑specific ATP synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,956,638 | 0 | C | A | 5.5% | 236.0 / 2.5 | 73 | V54V (GTG→GTT) | fliI | flagellum‑specific ATP synthase |
| Reads supporting (aligned to +/- strand): ref base C (39/30); new base A (2/2); total (41/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
CAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGG > NC_002947/4956491‑4956786 | cAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCAc > 2:1886200/1‑150 (MQ=255) aGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCAct < 2:15865/150‑1 (MQ=255) cACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACtgctgc > 1:1456661/1‑150 (MQ=255) aCGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTgcg > 1:1545298/1‑150 (MQ=255) cGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAgg > 1:1521517/1‑150 (MQ=255) cccccGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGGTCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCtt > 2:1241689/1‑150 (MQ=255) cccGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCg < 1:1886200/150‑1 (MQ=255) ccGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCgg < 2:1066525/150‑1 (MQ=255) cgATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCa > 2:1809756/1‑150 (MQ=255) gATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTNCAg < 2:1202617/150‑1 (MQ=255) aTGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAgg < 1:1844286/150‑1 (MQ=255) gCCGACGATACTGCCCACCGGCATCCGAAACACCTTGGGCCCGGCCCCATTTTTGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCCCCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGt < 1:1057978/150‑1 (MQ=255) gCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGt < 1:167207/150‑1 (MQ=255) cgacgaTACTGCCCACCGGCATCAGAAACGCCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGa < 2:1123840/150‑1 (MQ=255) gacgaTACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAg < 1:1489299/150‑1 (MQ=255) gaTACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGcc > 2:1383960/1‑150 (MQ=255) tACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGa > 2:1759746/1‑150 (MQ=255) aCTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGAc < 2:1865058/150‑1 (MQ=255) tGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCa > 1:524234/1‑150 (MQ=255) aTCAGAAACACCTTGGGCCCGGCAAAGCACATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAg > 2:532477/1‑150 (MQ=255) tCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACGTGCACCGGGGGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGc > 2:479479/1‑150 (MQ=255) aGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCgg > 2:1702611/1‑150 (MQ=255) aGAAAAACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCgg > 2:1702287/1‑150 (MQ=255) acacCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCtt > 1:553950/1‑150 (MQ=255) acacCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCAACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCAt > 2:1179844/1‑133 (MQ=255) acacCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCAACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCAt > 2:1180122/1‑133 (MQ=255) acacCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCAACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCAt < 1:1179844/133‑1 (MQ=255) acacCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCAACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCAt < 1:1180122/133‑1 (MQ=255) cTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTcgac > 2:763820/1‑150 (MQ=255) cTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCCTCGTGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTcgac > 1:1453506/1‑150 (MQ=255) ggCCCGGCAAAGCCCATGACTGCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGAtg < 2:845678/150‑1 (MQ=255) cccGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAg > 2:1510382/1‑93 (MQ=255) cccGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAg < 1:1510382/93‑1 (MQ=255) tgCAAATCCCATGAATTAGGACTCGCCATCCACCGAGTGATATCCGCGAACGTCGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGAtgggctg < 2:1453506/149‑1 (MQ=255) ggCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGAtgggctg < 2:1793928/150‑1 (MQ=255) gCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCCAGCGGCCTTCGACGAtgggctgg < 2:943471/150‑1 (MQ=255) ttCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTAGACGATGGGCTGGGCCGGCAGCTCGAt > 1:84236/1‑150 (MQ=255) ttCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGAAAGCGGCCTTCGACGATGGACTGGGCCGCCAGCTCGAt > 2:1545355/1‑150 (MQ=255) tCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGGTCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATg < 1:1241689/150‑1 (MQ=255) tCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATg < 1:1759746/150‑1 (MQ=255) ggCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGACCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGc > 2:746924/1‑150 (MQ=255) ccTCGCCCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCt > 2:852371/1‑150 (MQ=255) ccTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCt < 2:1290557/150‑1 (MQ=255) cTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTc > 1:1554904/1‑150 (MQ=255) cTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTGGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTa > 2:1090134/1‑150 (MQ=255) gCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAg < 1:1545355/150‑1 (MQ=255) tGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGa < 2:1456661/150‑1 (MQ=255) aaCTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCt > 1:199875/1‑150 (MQ=255) cTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTg > 1:1243229/1‑150 (MQ=255) tGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGTTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGc < 2:1866001/150‑1 (MQ=255) tGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGTTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGc > 1:1866001/1‑150 (MQ=255) tGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGc < 2:504767/116‑1 (MQ=255) tGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGc > 1:504767/1‑116 (MQ=255) tGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCCGCGTAAGTGCCCAGACGCTTGc > 2:670868/1‑150 (MQ=255) tCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTaa < 2:197169/132‑1 (MQ=255) tCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTaa > 1:197169/1‑132 (MQ=255) aTCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGaa > 1:1352423/1‑150 (MQ=255) tCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAg > 2:1341676/1‑150 (MQ=255) gTTGATCACCAGGCAGCGGCTGCACACTGCTGCGCGCAGGCCTTCGTCTTTCGGATTTAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCCGCGTAAGTGCCCAGACGCCTGCCGAAGcc > 2:738426/1‑149 (MQ=255) ttGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAgttt < 1:1809756/150‑4 (MQ=255) cagtgggCAGCCGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCGGGTGCg > 1:937420/6‑150 (MQ=255) cACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGAtgggctg < 1:477245/93‑1 (MQ=255) cACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGAtgggctg > 2:477245/1‑93 (MQ=255) aCCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGt > 2:1346123/1‑150 (MQ=255) cAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGc > 1:1364718/1‑114 (MQ=255) cAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGc < 2:1364718/114‑1 (MQ=255) cAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCGGGGCCGGCAGCTCGATGGCCTCAGCGTGAGTGCCCAGACGCTTGCCGAAGCTGGTGCGttg > 1:634702/1‑149 (MQ=255) aGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCa > 1:1625473/1‑150 (MQ=255) ggCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCGGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCaa > 2:174296/1‑150 (MQ=255) ggCAGCGGCTGCCCACTGCTGCGCGCAGGAATTCGGATTAAATTAGCAGCCCTATCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCaa < 1:1374684/150‑1 (MQ=255) gCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAg < 2:1625473/150‑1 (MQ=255) cAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCTACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAgg < 1:592355/150‑1 (MQ=255) aGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGgc < 1:1155946/150‑1 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg < 2:1554904/150‑1 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg < 2:1521517/150‑1 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg > 2:1423957/1‑150 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg < 2:1061741/150‑1 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGCGTGCGTGTGGCAGCTCAATGTGGTTAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg < 1:705200/150‑1 (MQ=255) cccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACAAAGCCCAAAGCCGGCAGCTTTATGTCTTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg < 1:705210/150‑1 (MQ=255) cccACTGATGGGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg > 2:1423918/1‑150 (MQ=255) ccACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTggg < 1:746924/150‑1 (MQ=255) | CAGCGGCACGACCCGGGCCCCCGGCGCGATGCCGACGATACTGCCCACCGGCATCAGAAACACCTTGGGCCCGGCAAAGCCCATGACTTCGGCCTCGACCTGCACCGGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGG > NC_002947/4956491‑4956786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |