| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,119,244 | G→C | 5.5% | E324Q (GAG→CAG) | PP_4505 → | sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,119,244 | 0 | G | C | 5.5% | 319.1 / 7.1 | 100 | E324Q (GAG→CAG) | PP_4505 | sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base G (46/48); new base C (2/4); total (48/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
ACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGCATCGTGATCA > NC_002947/5119095‑5119391 | acagCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTgg > 2:1661472/4‑150 (MQ=255) ggAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCa > 1:1797990/1‑150 (MQ=255) gAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGGGGATGACGAACAAGCCCGTGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGGGGCGCAg > 2:741052/1‑150 (MQ=255) gcccTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTCCAGGCGCacgtc < 2:13169/148‑5 (MQ=255) gACCTCATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCCAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCa < 1:467396/150‑1 (MQ=255) aCCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAg < 2:1106559/150‑1 (MQ=255) aCCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAg < 2:507509/150‑1 (MQ=255) aCCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTCCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAg < 1:1885188/150‑1 (MQ=255) cTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGCTGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGt < 1:1041519/150‑1 (MQ=255) cTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGt > 1:250455/1‑150 (MQ=255) tCAGCGATATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGa < 2:106394/150‑1 (MQ=255) tCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGa < 1:682533/150‑1 (MQ=255) cGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGGGCtg > 1:1270656/1‑149 (MQ=255) aaTCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCa < 1:1459377/150‑1 (MQ=255) tCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAgg > 1:821291/1‑150 (MQ=255) tCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAgg > 1:516263/1‑150 (MQ=255) cTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGt > 1:41262/1‑150 (MQ=255) tGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCaa < 1:344113/150‑1 (MQ=255) gCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGCCCTCACTGCCCTGCCCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACg < 1:1870352/150‑1 (MQ=255) cccGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGc < 1:1496236/150‑1 (MQ=255) cGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTg > 1:363924/1‑150 (MQ=255) gggTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGa < 1:1871882/150‑1 (MQ=255) ggTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGAt < 2:1352956/150‑1 (MQ=255) aTGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGc < 2:45883/150‑1 (MQ=255) aTGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGc < 2:1632797/150‑1 (MQ=255) gCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCgg > 2:1565995/1‑149 (MQ=255) cGAACAAGCCCATGCCGAACGGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGc > 1:966661/1‑150 (MQ=255) cGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGc > 2:1634061/1‑150 (MQ=255) gAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGCTCAGAACGTCACCCGGGAGGCGCAGCGAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGcc > 1:973906/1‑150 (MQ=255) aCAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGt < 1:109246/150‑1 (MQ=255) aCAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGt < 2:821291/150‑1 (MQ=255) cAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGtt < 2:1887051/150‑1 (MQ=255) aaGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGc > 2:548527/1‑132 (MQ=255) aaGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGc < 1:548527/132‑1 (MQ=255) gCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGATTGGGCGGCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCGGGGTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGAc > 1:1481981/1‑150 (MQ=255) ccATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGa > 1:1535536/1‑107 (MQ=255) ccATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGa < 2:1535536/107‑1 (MQ=255) ccATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACaa > 1:474738/1‑150 (MQ=255) ccATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACaa > 2:1919374/1‑150 (MQ=255) cATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTCCAGGCGCacg < 1:1211065/97‑3 (MQ=255) cATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTCCAGGCGCacg > 2:1211065/1‑95 (MQ=255) aTGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAAcc > 2:705007/1‑150 (MQ=255) tGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAgg > 1:125751/1‑89 (MQ=255) tGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAgg < 2:125751/89‑1 (MQ=255) tGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACct > 2:667057/1‑150 (MQ=255) cGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTAGCGTTGACAACctgca > 2:754124/1‑149 (MQ=255) gTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAAt < 2:1797990/150‑1 (MQ=255) tCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACg > 2:668155/1‑113 (MQ=255) tCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACg < 1:668155/113‑1 (MQ=255) gACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGcc > 1:1560494/1‑150 (MQ=255) aCCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGccc > 2:1130627/1‑150 (MQ=255) cTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTg > 1:949113/1‑150 (MQ=255) cAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCtgctgc < 2:1858720/137‑1 (MQ=255) cAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCtgctgc > 1:1858720/1‑137 (MQ=255) aTGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCt > 2:1345570/1‑150 (MQ=255) tGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCtt > 1:86329/1‑150 (MQ=255) ccTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGtt > 1:1640288/1‑92 (MQ=255) ccTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGtt < 2:1640288/92‑1 (MQ=255) tACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAAcc < 1:1919374/150‑1 (MQ=255) tACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAAcc < 2:1531077/150‑1 (MQ=255) tCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCcgg > 1:397183/1‑150 (MQ=255) ggCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACctgc < 2:144402/121‑1 (MQ=255) ggCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACctgc > 1:144402/1‑121 (MQ=255) aGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGc < 1:1224019/150‑1 (MQ=255) tGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGc < 1:1565995/150‑1 (MQ=255) gcgcAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGcc < 1:484638/150‑1 (MQ=255) cAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCa < 2:354663/55‑1 (MQ=255) cAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCa > 1:354663/1‑55 (MQ=255) aaGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTc > 1:644922/1‑150 (MQ=255) tactcccTGCTGGGCGTGCCGAATCAGGACGTGTGCCTGCAGCCGCAGAACGGTTTGAGCTTGAAGGGCTGGCAACCGCTTATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAg < 2:1349323/146‑1 (MQ=255) gACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAg < 2:1520543/150‑1 (MQ=255) gACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAg > 1:1582541/1‑150 (MQ=255) gACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTAGCAATAGCTGATCGAGCTTTGCGTTTACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAg < 1:705007/150‑1 (MQ=255) ccGCCCTGATGAGCGCGCCGTATCAGGACGTGCGCCTGGCGGCGCAGCCAGATTTGAGCCTGCAGGGTTGGCCAACGCTTATCGAGCGTGCCGGTGACAACCTGATGCGCAATGCCCTGCGCCCCAACCCGGCTGGCCCGCCgggttgaa < 1:364149/149‑7 (MQ=255) ccTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCt < 1:972033/114‑1 (MQ=255) ccTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTc > 2:230555/1‑142 (MQ=255) ccTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTc < 1:230555/142‑1 (MQ=255) ccTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAg > 1:31777/1‑150 (MQ=255) ccTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAg > 2:787480/1‑150 (MQ=255) tgctgAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCTAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCNgcg < 2:1202086/150‑1 (MQ=255) tgctgAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAgcg < 1:796461/150‑1 (MQ=255) gctgAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAgcgc > 2:466455/1‑150 (MQ=255) aGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGCTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCcgcg > 1:708033/1‑150 (MQ=255) cgcgcCGGATACGGACGTGCGCCTGGAGGCGCAGCCAGGGGTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCcgcgcg > 2:1716215/1‑150 (MQ=255) gcCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGACCAACGCTGATCGAGCGTGCCGTTGACAACCTACTGCGCAAGGCCCAGCGCTTCGTCTCGGCGGGCCAGCCGGTCGAGGTAAGCGCCGCGCGCGa < 2:65752/150‑1 (MQ=255) ggATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCa < 1:109010/150‑1 (MQ=255) ggATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGCTCGACGTCAGTGCCGCGCGCGAGCa < 2:966661/150‑1 (MQ=255) gATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCaa > 2:1750236/1‑92 (MQ=255) gATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCaa < 1:1750236/92‑1 (MQ=255) gATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAg < 2:397183/150‑1 (MQ=255) gATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAg < 2:363924/150‑1 (MQ=255) tCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGa > 1:58987/1‑150 (MQ=255) aGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGc > 2:1779694/1‑63 (MQ=255) aGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGc < 1:1779694/63‑1 (MQ=255) ctggctGCGCCTCCAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGa < 1:7872/142‑1 (MQ=255) ctggctGCGCCTCCAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGa > 2:7872/6‑147 (MQ=255) gACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGc > 1:1809703/1‑150 (MQ=255) gTGCGCGTGGAGGCGCAGCTAGGTGTGAGCGTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGGGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGCATc < 2:658390/150‑1 (MQ=255) gcCGGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGCATCGTGa < 2:766127/150‑1 (MQ=255) tGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGCATCGTGATCa > 2:1768815/1‑150 (MQ=255) | ACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGCAGCGTGCGCAAGGACGCCCTGCTGAGCGCGCCGGATCAGGACGTGCGCCTGGAGGCGCAGCCAGGTTTGAGCTTGCAGGGTTGGCCAACGCTGATCGAGCGTGCCGTTGACAACCTGCTGCGCAATGCCCTGCGCTTCAACCCGGCGGGCCAGCCGGTCGAGGTCAGCGCCGCGCGCGAGCAGGACCGCATCGTGATCA > NC_002947/5119095‑5119391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |