| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,343,667 | C→A | 6.7% | L287M (CTG→ATG) ‡ | pgi‑II → | glucose 6‑phosphate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,343,667 | 0 | C | A | 6.7% | 200.4 / 4.7 | 74 | L287M (CTG→ATG) ‡ | pgi‑II | glucose 6‑phosphate isomerase |
| Reads supporting (aligned to +/- strand): ref base C (37/32); new base A (2/3); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.18e-01 | |||||||||||
GCTGTACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCAAACAG > NC_002947/5343525‑5343815 | gCTGTACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAACCATCTTCCCAATGTGGGCCTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCAt < 2:800669/150‑1 (MQ=21)gCTGTACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTCCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCAt < 2:1027009/150‑1 (MQ=21)gCTGTACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTCCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCAt < 2:695334/150‑1 (MQ=25)gCTGAACCGCCACTCCGTGGCCGTATCCGGCAACAAGGCCGCGGCGGTAGCTTTCGGTACCCGCGAAGAAAACATCTTCCAAATGTGGGACTGTGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCAt < 2:1525333/150‑1 (MQ=11) tACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATGGCCAGGGCGATCGGc > 1:748048/1‑150 (MQ=11) tACCGCCACTTCATGGCCGTACCCAGCAACAAGGCCCCTGCGGTAGCGTTCGGTATCCGCGAAGAAAACATCTCCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATGGCCAGGGCGATCGGc < 2:748048/150‑1 (MQ=11) ccGCCACTTCTTGGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGACGAAACCACTTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATGGCCAGGGCGATCGGCag < 1:1668222/150‑2 (MQ=11) cGCCACTTCATTGCCGTATCCAGGAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCGAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCGGCAGATCGCCCTGGCCATCGTCACt > 2:950939/1‑150 (MQ=11) cGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACt < 1:561970/150‑1 (MQ=34) gCCACTTCATTGCCGTATCAAGCAACAAGGCCGCTGCTGTAGCGTTCGTTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATGGCCAGGGCGATCGGCaggc < 1:367405/150‑4 (MQ=11) ccACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGc > 1:1075089/1‑150 (MQ=35) ttCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTGTCCGCGAAGAAAACATCTTCCCACTGGGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGGCAGCGGCACTGCCAAc < 2:1456372/150‑1 (MQ=11) ttCATTGCCGTACCCAGAAAAAAGGCCGCTGCGGTGTCGTTCGGTACCCGCAAAGAAAACATCTTCCCAATGTGGGACGGGGGGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAAc < 1:950939/150‑1 (MQ=11) aTTGCCGTATCCATCAACAAGGCCGCTGCTGTAGCGTTCGGTATTCTTGAATGAAACATCTTCCCAATGTGGGACTGGGTGTGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTc > 2:1710588/1‑150 (MQ=11) tGCCTTATCCAGCAACAGGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCaa < 1:404778/150‑1 (MQ=25) gCCGTATCCAGCAACAGGGCCGCTGCGGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAg < 2:1423813/150‑1 (MQ=25) gTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGaa < 2:768983/150‑1 (MQ=34) tacccAGCAACAGGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAACCATCTCCCCAATGGGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAAc < 2:1107375/147‑1 (MQ=11) tCCAGAAACAAGGCCGCTGCTGTAGCGTTCGGTACCCGCGAAGAAAACATCTTCCCAATGGGGGCCTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAActg < 1:769664/150‑1 (MQ=255) cAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAActgct > 1:46612/1‑150 (MQ=35) cAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGCGGTGGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCACATCCAAGGAGctgcc > 2:242249/1‑149 (MQ=11) aGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAActgctg > 1:321467/1‑150 (MQ=35) aGCAACAAGGCCGCGGCTTTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAActgctg < 2:807234/150‑1 (MQ=21) acaaGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCg > 2:1597694/1‑150 (MQ=35) gctgctGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTac > 1:1872580/1‑150 (MQ=38) gctgctGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGCACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTac > 2:1474236/1‑150 (MQ=38) cGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGAcc > 2:702488/1‑150 (MQ=38) tCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTcc > 1:371242/1‑150 (MQ=38) gcgAAGAAACCATCTCCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGa < 1:983285/150‑1 (MQ=255) gcgAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGa > 2:636495/1‑150 (MQ=38) gcgAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGa > 2:1750050/1‑150 (MQ=39) cgAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGAc > 1:1865272/1‑150 (MQ=39) aTCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTc > 1:1882207/1‑150 (MQ=39) ccAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAg < 1:636495/150‑1 (MQ=38) ccAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAg > 2:625850/1‑150 (MQ=38) cAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGa > 1:1134848/1‑150 (MQ=38) cAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGa > 2:1786048/1‑150 (MQ=38) cAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGa > 2:1623844/1‑150 (MQ=38) aaTGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGTTAGCCCTGGCCATCGGCACGGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGaa > 1:1178779/1‑150 (MQ=255) aaTGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGaa > 1:1141726/1‑150 (MQ=35) aaTGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACCGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGa < 2:110586/149‑1 (MQ=37) aaTGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACCGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGa > 1:110586/1‑149 (MQ=25) ggtgggCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCt > 1:1664496/1‑150 (MQ=35) ggtgggCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCAATCAGCCCGGCTGTCGGCACTGCCAACTTCAAGGGACTGCTGTCCGGCGCCTACACCATGTGCCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCt > 1:1482338/1‑150 (MQ=11) cgcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCctg > 2:1291948/1‑150 (MQ=32) gcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTgg > 2:452471/1‑144 (MQ=32) gcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTgg < 1:452471/144‑1 (MQ=32) gcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCctgc > 2:1711350/1‑150 (MQ=32) gcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGCTCGACAAGAACATGCCGGTGCTACTGGCCctgc > 1:561432/1‑150 (MQ=17) cTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCctgct < 1:1750050/150‑1 (MQ=32) tACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCctgctg > 2:1105635/1‑150 (MQ=32) aCTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCctgctgc < 2:1872580/150‑2 (MQ=17) aCTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTgg < 2:969774/150‑1 (MQ=32) aCTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTgg < 2:321467/150‑1 (MQ=32) aCTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCAAAGTCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTgg < 1:1367157/150‑1 (MQ=12) tctcTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACAAAATATACCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGc < 1:1078034/147‑1 (MQ=11) tCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGc > 1:1049050/1‑150 (MQ=32) tCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGc > 1:107891/1‑150 (MQ=32) cTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCgtg < 2:580000/150‑1 (MQ=32) tgtgGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCgtgt > 2:816852/1‑150 (MQ=32) gTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTTCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTa < 2:1178779/150‑1 (MQ=17) gTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTa < 2:1075089/150‑1 (MQ=32) cGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATg < 1:1711350/150‑1 (MQ=32) aTCTGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAAc > 1:685361/1‑150 (MQ=17) gCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTCTGGCAACTTCt > 2:68812/1‑150 (MQ=17) ccTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTg < 1:1291948/150‑1 (MQ=32) ccTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTg < 2:685361/150‑1 (MQ=32) ccTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTg < 2:1664496/150‑1 (MQ=32) gtGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTgg > 2:803726/2‑150 (MQ=17) cTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTgg > 2:1304243/1‑150 (MQ=32) tGCCGATGGCCAGGGCGATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTggg > 2:1072352/1‑150 (MQ=11) gCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGa < 1:1309317/150‑1 (MQ=32) ccGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGAc < 1:1474236/150‑1 (MQ=32) tCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCaa > 2:97210/1‑150 (MQ=32) cccTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATg < 1:1856173/129‑1 (MQ=32) cccTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATg > 2:1856173/1‑129 (MQ=33) ccTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCAAACAg > 2:492001/1‑150 (MQ=32) | GCTGTACCGCCACTTCATTGCCGTATCCAGCAACAAGGCCGCTGCTGTAGCGTTCGGTATCCGCGAAGAAAACATCTTCCCAATGTGGGACTGGGTGGGCGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGCGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGTATGGCAACTTCTGGGACGCAAACAG > NC_002947/5343525‑5343815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |