| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,743,687 | T→C | 5.0% | Y745C (TAC→TGC) ‡ | glgP ← | glycogen phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,743,687 | 0 | T | C | 5.0% | 288.9 / 3.2 | 99 | Y745C (TAC→TGC) ‡ | glgP | glycogen phosphorylase |
| Reads supporting (aligned to +/- strand): ref base T (43/51); new base C (2/3); total (45/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGA > NC_002947/5743538‑5743834 | tCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGCGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCCACCCGgtgt > 2:380818/1‑150 (MQ=255) gtgccgtgTTCAATACCGCCTTGCGCCACCGCTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTAcc < 2:1300464/150‑1 (MQ=255) gtgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGaa < 1:1142081/150‑1 (MQ=255) tgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCCCCTTCGCTGCGATCAACCCGGTGTACCGGGAAg < 1:527621/150‑1 (MQ=255) tgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAg > 1:698468/1‑150 (MQ=255) tgtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAg > 1:1209710/1‑150 (MQ=255) gtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAgg < 2:1135386/150‑1 (MQ=255) gtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAgg < 2:1166239/150‑1 (MQ=255) gtTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCAAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttga < 1:1328132/150‑5 (MQ=255) ttCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAggg > 2:317149/1‑150 (MQ=255) ttCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttgat < 1:183787/150‑6 (MQ=255) ttCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTACACCgggttgat > 2:183787/1‑145 (MQ=255) cAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGgtc < 1:667598/150‑1 (MQ=255) aTACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGgtcgt > 1:685743/1‑150 (MQ=255) ccGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTg < 2:1209710/150‑1 (MQ=255) cTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCga > 1:1656099/1‑150 (MQ=255) tcgcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCGGGCCGGTGTACCGGGAAGGGTCGTCTGGCGAGaa < 1:1893709/149‑1 (MQ=255) gcgcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCTGTAGTCATCGAAAGCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGaa < 2:598648/150‑1 (MQ=255) gcgcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGaa < 2:1123801/150‑1 (MQ=255) gcCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGAACAACCCGGGGTACCGGGAAGGGTCGTCTGGCGAGAa‑ca > 2:1893709/1‑150 (MQ=255) accacTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAa‑cacac > 2:1890327/1‑150 (MQ=255) tGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGa > 1:870131/1‑150 (MQ=255) tGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGa > 1:1336602/1‑150 (MQ=255) gCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGaa < 1:1135608/150‑1 (MQ=255) cGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAAt < 2:672385/150‑1 (MQ=255) cGGTGTGGGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAAt < 2:1670390/150‑1 (MQ=255) ggTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATg < 1:317149/150‑1 (MQ=255) tgCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGc > 1:254283/1‑150 (MQ=255) gCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAa‑caca < 2:1105961/131‑1 (MQ=255) gCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAa‑caca > 1:1105961/1‑131 (MQ=255) ccACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCaa > 1:172947/1‑150 (MQ=255) ccACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCaa > 1:664063/1‑150 (MQ=255) cacaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAa‑cacac < 2:1274078/130‑1 (MQ=255) cacaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAa‑cacac > 1:1274078/1‑130 (MQ=255) cacaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAac > 1:924236/1‑150 (MQ=255) acaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGc < 1:965627/135‑1 (MQ=255) acaGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGc > 2:965627/1‑135 (MQ=255) caGATCCTCGCCCCGCGGCTTAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAacac < 1:787418/150‑1 (MQ=255) caGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAacac < 1:101446/150‑1 (MQ=255) gACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGTAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCaa > 2:755923/1‑150 (MQ=255) gACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGTAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCaa > 2:755068/1‑150 (MQ=255) gACCCGCAGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCCTGCGGCGCTAAGTCTGCGACCAGACCGGTGTACCGGGCCGGGTCGTCTGGTGAGAA‑TGCGCCACTGCGAATGGCCTGCAACACATCGGTCaa < 1:1875566/150‑1 (MQ=255) cccGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGCCGCTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGc < 1:974270/150‑1 (MQ=255) ccgccgCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATgg > 2:1346967/1‑128 (MQ=255) ccgccgCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATgg < 1:1346967/128‑1 (MQ=255) cgccgcTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCgg > 2:42801/1‑150 (MQ=255) gccgcTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGt < 1:923807/150‑1 (MQ=255) cATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCgg < 2:685743/150‑1 (MQ=255) aTCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATCGGCCACAAGGCCGTCGATCCACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCCCTACAACTGGCCTGCAACACATCCATCAACCGGTTGGAAGCTGc > 2:139713/1‑150 (MQ=255) cAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAACGGTCGTCAGGCGAGAA‑CACATCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATg < 2:1056700/150‑1 (MQ=255) gtagtCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTTGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGgc < 2:1489509/150‑1 (MQ=255) aTCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCAtt > 1:1428023/1‑150 (MQ=255) aTCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCAtt > 1:1292625/1‑150 (MQ=255) tCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTg < 2:698468/150‑1 (MQ=255) tCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGGTGGAAGCGGCTATGGCAGCCTTg > 2:288425/1‑150 (MQ=255) ccgtgttCGGCAGACACCAGGAAGCGATCTTAGGCCACCAGGCCGTCGATCAACCCGGGGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTg < 2:869640/144‑1 (MQ=255) tCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATgg > 2:300886/1‑136 (MQ=255) tCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATgg < 1:300886/136‑1 (MQ=255) ggccacCAGGGAGCGATCATCGGCCACCAGGCCGTCTATCAACCCGGTGTACCGGGAAGGGTCGTCTGCACGGAATGATTCGGGT‑CGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATc < 2:1499587/147‑1 (MQ=255) acCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTc < 1:1900896/105‑1 (MQ=255) acCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTc > 2:1900896/1‑105 (MQ=255) acCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCg < 1:1621300/150‑1 (MQ=255) ccAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCgg < 1:42801/150‑1 (MQ=255) gATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGc > 1:878224/1‑79 (MQ=255) gATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGc < 2:878224/79‑1 (MQ=255) aTCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTgcg > 2:202483/1‑150 (MQ=255) aTCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTgcg > 1:1565837/1‑150 (MQ=255) aTCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGATGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGACACGCTTgcg > 2:1596450/1‑150 (MQ=255) tAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACAt > 1:1261608/1‑85 (MQ=255) tAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACAt < 2:1261608/85‑1 (MQ=255) gCCACCATGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCGCTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCa > 2:804795/1‑150 (MQ=255) gCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCa > 1:1425380/1‑150 (MQ=255) ccaccaGGCCGTCGATCAACCCGCTGTCACGGGAAGGGTCTTCTGGCGAGAA‑CACACCACTGCGAATGGCATGAAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCaa < 1:1066861/150‑1 (MQ=255) caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGaa < 2:1411698/65‑1 (MQ=255) caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGaa < 2:1411304/65‑1 (MQ=255) caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGaa > 1:1411304/1‑65 (MQ=255) caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGaa > 1:1411698/1‑65 (MQ=255) caccaGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAAc > 1:983471/1‑150 (MQ=255) gCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCC‑AAATCACCGGCACGCTTGCGCGCTTCAACCtgctgc < 1:680447/150‑1 (MQ=255) ccGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCtgctgc < 2:81911/150‑1 (MQ=255) gTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCACCCTGCTGCGa < 2:924236/150‑1 (MQ=255) gTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGa < 1:1145853/150‑1 (MQ=255) tCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg < 1:1233935/150‑1 (MQ=255) gATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACctgct > 2:843182/1‑143 (MQ=255) gATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACctgct < 1:843182/143‑1 (MQ=255) gATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGt > 2:1875214/1‑150 (MQ=255) aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg < 1:747180/147‑1 (MQ=255) aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg > 2:747180/1‑147 (MQ=255) aTCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTc > 1:1598444/1‑150 (MQ=255) ccttcccGGTACACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg > 1:803868/5‑146 (MQ=255) ccttcccGGTACACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAg < 2:803868/142‑1 (MQ=255) cAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAg < 2:1598444/150‑1 (MQ=255) aCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAg > 1:872148/1‑71 (MQ=255) aCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAg < 2:872148/71‑1 (MQ=255) aCCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGc < 2:1436310/150‑1 (MQ=255) cccGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgcgc < 2:1119851/101‑1 (MQ=255) cccGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgcgc < 2:1120674/101‑1 (MQ=255) cccGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgcgc > 1:1120674/1‑101 (MQ=255) cccGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGgcgc > 1:1119851/1‑101 (MQ=255) tgtACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGa < 2:1336602/150‑1 (MQ=255) | TCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCACAGATCCTCGACCCGCCGCTGAGCATCCCAGTAGTCATCGAAATCGGCACACACCAGGAAGCGATCATAGGCCACCAGGCCGTCGATCAACCCGGTGTACCGGGAAGGGTCGTCTGGCGAGAA‑CACACCACTGCGAATGGCCTGCAACACATCGGTCAAGCGGTTGGAAGCGGCTATGGCAGCATTGGCGCCAAAATCACCGGCACGCTTGCGCGCTTCAACCTGCTGCGAGGTCAGGCCAAAGA > NC_002947/5743538‑5743834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |