| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,808,040 | A→G | 10.8% | intergenic (+119/+36) | mrcA → / ← maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,808,040 | 0 | A | G | 10.8% | 159.4 / 9.3 | 65 | intergenic (+119/+36) | mrcA/maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| Reads supporting (aligned to +/- strand): ref base A (33/25); new base G (3/4); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01 | |||||||||||
GCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAACGACGGTGAT > NC_002947/5807903‑5808189 | gCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCGCATGAGCCgggg < 2:201704/150‑1 (MQ=255) ccGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGc < 2:965433/150‑1 (MQ=255) aTGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGGTTTGCGTGGGCGCTCGATCTAATAGGCGCCACAAGGGCCCTGACCAACACCTTGCAGCCCTGATACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCGCATGCGCACCGGGGCttt > 2:1002887/1‑150 (MQ=255) tGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACAGCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATgg < 1:609763/150‑2 (MQ=38) gTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCACATAA‑AAAAGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATggg < 1:111571/150‑3 (MQ=38) ttCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCg > 1:195308/1‑150 (MQ=255) ttCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCg > 1:1443715/1‑150 (MQ=255) aGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATgg > 1:261731/1‑138 (MQ=38) aGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATgg < 2:261731/139‑2 (MQ=38) gcgcCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATc < 2:1538697/150‑1 (MQ=255) gcCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCGTGGCACTGTCCCAAGCCCCATAACACCAGTCAC‑GATAATGGAAGTCGTGGGTTTTTTATGTCGCTTGCTGCAATCAg > 1:1867900/1‑150 (MQ=255) gcCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAg > 1:1725665/1‑150 (MQ=255) cggTTGTGCGTGGGCGCTCACACAAACAGGCGCCACAAGCGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAac < 2:441791/149‑1 (MQ=255) tCGATCTGCTAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGt > 2:1168168/1‑150 (MQ=255) tCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCAc < 2:1451084/144‑1 (MQ=255) tCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCAc > 1:1451084/1‑144 (MQ=255) aTAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCg > 1:876374/1‑119 (MQ=255) aTAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCg < 2:876374/119‑1 (MQ=255) aGGCGCCACAAGGGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTaa < 1:1333738/150‑1 (MQ=255) gcgcCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCgg < 1:595827/144‑1 (MQ=255) gcgcCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCgg > 2:595827/1‑144 (MQ=255) gcgcCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATg < 2:1867900/150‑1 (MQ=255) ccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCgggg > 2:317407/1‑82 (MQ=255) ccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCgggg < 1:317407/82‑1 (MQ=255) ccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCtt > 1:836322/1‑150 (MQ=255) acaAGTGCCCTGACGAACACCTTGCAGCGCTGACACATTCCCAAGCACCATAA‑AAAAGCCCCGGCTCATGCGAGACGGGGCTTTTTTATGTCGCTTGCTGCAGTCAGCCG‑TTGAACACTTCCTCCACGCTGGTCAGCGGGTAATGCTTCg > 1:1681488/1‑150 (MQ=255) acaAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCg > 1:1293625/1‑150 (MQ=255) caAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCgg < 2:195308/150‑1 (MQ=255) cTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCAGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCa > 2:412660/1‑150 (MQ=255) cTGACCAACACCTAGCAACCCTGACACATTCCCCAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGCGCAACTTTATCTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGCTAAGGcc > 2:914123/1‑149 (MQ=255) aCCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAggg < 1:1168168/150‑1 (MQ=255) ccAACACCTTGCAGCCCTGCCACATGCCCAAGCCCCATAA‑CAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCCGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGt < 1:1002887/150‑1 (MQ=255) cAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTa > 1:1027433/1‑150 (MQ=255) cAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTa < 1:1627431/150‑1 (MQ=255) aaCACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAg > 2:1427884/1‑150 (MQ=255) acacCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGc < 2:1412639/150‑1 (MQ=255) acacCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTACATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGc > 1:681264/1‑150 (MQ=255) ccTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCGTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCAc > 1:47421/1‑150 (MQ=255) cTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACg > 1:560239/1‑150 (MQ=255) cccTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGAtt < 2:1837127/150‑1 (MQ=255) cccTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGAtt > 2:1227250/1‑150 (MQ=255) cTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCg > 2:1671378/1‑150 (MQ=255) tGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGa > 1:1285082/1‑150 (MQ=255) acacATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATg < 2:1293625/150‑1 (MQ=255) aTTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAg > 1:1331948/1‑150 (MQ=255) ccAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTGCGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCtt > 1:959280/1‑150 (MQ=255) cAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTg < 2:1443715/150‑1 (MQ=255) cAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTg > 1:726673/1‑150 (MQ=255) gacATAA‑AAAAGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCcac > 2:716677/3‑150 (MQ=38) ccAGAA‑AAAGGCCCCGGGTCATCCGAGCCGGGGATTTTCGATGCCGGGTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCcaca < 2:959280/150‑1 (MQ=255) cATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAg > 1:1098365/1‑150 (MQ=255) aa‑aaaaGCCCCGGCTCGCATGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTTGATGGCAGCCTTGGCCACAGCAt > 2:1391646/1‑150 (MQ=39) a‑aaaaGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATc < 2:1331948/150‑1 (MQ=255) aaaGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGAATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCGCAGCATAgg > 2:517076/1‑150 (MQ=255) ccccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAac > 2:1166430/1‑150 (MQ=255) cccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTTGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGc > 2:1467797/1‑107 (MQ=255) cccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTTGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGc < 1:1467797/107‑1 (MQ=255) cccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTc > 1:1631842/1‑90 (MQ=255) cccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTc < 2:1631842/90‑1 (MQ=255) ccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGc > 1:1342610/1‑48 (MQ=255) ccGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGc < 2:1342610/48‑1 (MQ=255) ccGACTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGATGCAATC‑GCTGCTTGATCACTTCATCCACGCTTTGCAGCGGGTAATGCTTACGGTAAGGCGGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAacga > 1:976236/1‑150 (MQ=255) ggCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAacgacg < 2:560239/150‑1 (MQ=255) cTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGGAACGACGGt < 2:270807/150‑1 (MQ=255) cTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAACGACGGt < 2:836322/150‑1 (MQ=255) aTGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAgg > 1:1335623/1‑94 (MQ=255) aTGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAgg < 2:1335623/94‑1 (MQ=255) aTGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAACGACGGTGAt < 1:1166430/150‑1 (MQ=255) | GCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAA‑AAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCG‑TTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTCGGATAAGGCAGGGTAGCCACGCCGGATTCGATGGCAGCCTTGGCCACAGCATCGGAAACGACGGTGAT > NC_002947/5807903‑5808189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |