| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,866,753 | A→C | 6.4% | intergenic (+20/+37) | PP_5140 → / ← thyA | MerR family transcriptional regulator/thymidylate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,866,753 | 0 | A | C | 6.4% | 192.5 / 2.5 | 73 | intergenic (+20/+37) | PP_5140/thyA | MerR family transcriptional regulator/thymidylate synthase |
| Reads supporting (aligned to +/- strand): ref base A (38/28); new base C (3/2); total (42/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCATACTTGCCAGTTTCGG > NC_002947/5866605‑5866899 | gtggAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGaa < 1:284532/150‑1 (MQ=255)gtggAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGaa < 2:357300/150‑1 (MQ=255) tggAGCTGCGGCGGCTCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGCATACCGAACATTGCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAAc < 2:1051728/150‑1 (MQ=255) tggAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAAc < 1:1114296/150‑1 (MQ=255) gAGCTGCGGCGGCACTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAAccc > 1:62086/1‑150 (MQ=255) gcggcggcgCTGCAACTCGCAGGGGGGTGACCGCGCGATCTTACAGCAAGTCGTGACAAACTGGGCGGGATCGGGACCGGACGCCGAACAGTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGaa < 2:572853/150‑1 (MQ=255) ggcggcgCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAaga < 2:522907/150‑1 (MQ=255) gcgcTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAACCGGGGCGGCATCGACGCCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTc < 1:797414/150‑1 (MQ=255) tGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GGCAGtt > 2:350180/1‑150 (MQ=255) cAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTAGCGGTACCGGAGACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCt > 1:1875281/1‑150 (MQ=255) aCGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTaa > 1:1585086/1‑150 (MQ=255) aGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATag > 1:620117/1‑150 (MQ=255) ggggAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGAATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATaga < 1:1504078/150‑1 (MQ=255) gAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGAt > 1:831093/1‑150 (MQ=255) gTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCt > 1:1565915/1‑150 (MQ=255) tGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTa > 1:740711/1‑150 (MQ=255) tGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCg > 1:933599/1‑150 (MQ=255) tGCAGCAACTGAAGACAAACGGGGCGGTATTGGTACCGGATACCGAATATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACATTAGAGATCTATCAGACCGCCATCg < 2:142018/150‑1 (MQ=255) gcagcaACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCAATGTGCCACAAGCTTCGCCAGCGTTCGTGCCACAGT‑GTTTTTTCTAACAATAGAGATCTATCAGACCGCCATCgg > 1:1376072/1‑150 (MQ=255) gcaACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGAc > 2:1351404/1‑138 (MQ=255) gcaACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGAc < 1:1351404/138‑1 (MQ=255) aaCTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTg < 2:758041/150‑1 (MQ=255) cTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTc < 2:620117/150‑1 (MQ=255) gagaCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCTGGGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTa > 1:1786595/1‑111 (MQ=255) gagaCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTa < 2:1786595/111‑1 (MQ=255) gagaCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATc < 2:740711/150‑1 (MQ=255) agaCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGGCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCg < 2:1790035/150‑1 (MQ=255) gaCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCgg > 1:402355/1‑150 (MQ=255) aCAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGCACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGgc < 1:1430323/150‑1 (MQ=255) aaaCGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGgcgc > 1:926203/1‑150 (MQ=255) aTCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATa < 2:1758328/150‑1 (MQ=255) gTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGCCGCTGCCATCGGCGCATGGTGCTCATTGCCt < 2:117455/150‑1 (MQ=255) tACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GGCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCTGCGCATGGTGCTCATAGCCtt > 2:1026846/1‑150 (MQ=255) ccGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTcc > 2:1009461/1‑150 (MQ=255) gATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGCGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTccagc > 1:68143/1‑150 (MQ=255) gATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTg > 1:1501870/1‑134 (MQ=255) gATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTg < 2:1501870/134‑1 (MQ=255) gATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTccagc > 1:398507/1‑150 (MQ=255) cGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGaa > 2:300768/1‑150 (MQ=255) gAACATTCCCATGTGGGGCGGAGTCACTGGCATTGAGCCAAATGCTAAGC‑GGTCGGCACGGTTAGTGTGGGTGTTCTTACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGaaa < 1:224087/150‑1 (MQ=255) gAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGaaa > 2:806396/1‑150 (MQ=255) gAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGATGAACCCGCGAAGAG‑GTCAGGTCTAACAATAGAGATATATCAGACCGCCATCGGCGCTGTCATCGACGCATGGTGCTCATAGCCTTCCAGCCAGaaa > 2:914045/1‑150 (MQ=255) aaCATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAAt < 2:1376072/150‑1 (MQ=255) aTTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCAc < 2:1875281/150‑1 (MQ=255) ccATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGaa > 2:586823/1‑57 (MQ=255) ccATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGaa < 1:586823/57‑1 (MQ=255) ccATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTACGAGGGTGCACCCACGGCCAG‑GGAAGTAATTTCAATAGTGAGCTATCGGGCGCCCATCTGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCgg > 2:1161822/1‑150 (MQ=255) cATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATTAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGc > 2:177392/1‑150 (MQ=255) cATGTGGGGCGGAGTCACGCGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGc > 2:1608074/1‑150 (MQ=255) aTGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACt < 2:74777/145‑1 (MQ=255) aTGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACt > 1:74777/1‑145 (MQ=255) tgGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCaa > 2:252735/1‑150 (MQ=255) ggggCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAAt < 2:1565915/150‑1 (MQ=255) gCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCAt < 2:310475/99‑1 (MQ=255) gCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCAt > 1:310475/1‑99 (MQ=255) cGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAAtcttc < 1:1608074/150‑1 (MQ=255) ggAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCCGTAAGAGTTGCGTTTGTCGCATAGCCTTCCAGCCAGAAATCACTCGGCTCAAtcttct > 2:1483145/1‑150 (MQ=255) tCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTAt > 1:1498857/1‑70 (MQ=255) tCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTAt < 2:1498857/70‑1 (MQ=255) aCGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGcc > 2:454441/1‑150 (MQ=255) gggCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCAc > 2:1523603/1‑150 (MQ=255) ggCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACt < 1:1009461/150‑1 (MQ=255) gCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTc > 1:1681216/1‑150 (MQ=255) cATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCa < 2:1611778/73‑1 (MQ=255) cATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCa > 1:1611778/1‑73 (MQ=255) aTTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCg > 2:1106013/1‑150 (MQ=255) tGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGc < 2:274977/150‑1 (MQ=255) ccAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGAAAAAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCAt > 1:496765/1‑150 (MQ=255) ccAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCAAGCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCAt > 1:1573186/1‑150 (MQ=255) ctcTTCGCGGGTTCACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCg > 2:1821859/3‑64 (MQ=37) ctcTTCGCGGGTTCACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCg < 1:1821859/62‑1 (MQ=37) ctcTTCGCGGGTTCACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCATACtcg > 2:43906/3‑148 (MQ=255) gcgGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCATACTTGCCAGtt > 1:1236451/1‑150 (MQ=255) gTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTTGGCTCAATCTTCTCCAGCCACTCCGGCTCATACTTGCCAGTTTCgg < 1:549498/150‑1 (MQ=255) gTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCATACTTGCCAGTTTCgg > 1:585042/1‑150 (MQ=255) | GTGGAGCTGCGGCGGCGCTGCAACGCGCAGGGGAGTGAATGCGCGATCTTGCAGCAACTGGAGACAAACGGGGCGGTATCGGTACCGGATACCGAACATTCCCATGTGGGGCGGAGTCACGGGCATTGAGCCAAAAGCTTCGCGGGTGAACCCGCGAAGAG‑GTCAGTTCTAACAATAGAGATCTATCAGACCGCCATCGGCGCTGTCATCGGCGCATGGTGCTCATAGCCTTCCAGCCAGAAATCACTCGGCTCAATCTTCTCCAGCCACTCCGGCTCATACTTGCCAGTTTCGG > NC_002947/5866605‑5866899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |