| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,918,445 | T→A | 7.2% | intergenic (+79/+16) | ygiF → / ← PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,918,445 | 0 | T | A | 7.2% | 193.0 / 6.0 | 71 | intergenic (+79/+16) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (34/31); new base A (3/2); total (37/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
GGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACGTGA > NC_002947/5918297‑5918594 | ggAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGGGGGGCGTGAGGCCGGTGTAGGCGCGGGgtt > 1:480243/1‑150 (MQ=255) cgcgTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCcg < 2:1246558/150‑1 (MQ=255) gcgTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCcgc > 2:954603/1‑150 (MQ=255) gAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGc < 2:1837635/150‑1 (MQ=255) aaCAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGcc < 1:658429/150‑1 (MQ=255) aCCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAg < 2:1038304/150‑1 (MQ=255) gCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgt < 1:1014276/150‑1 (MQ=255) ccGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCt < 1:685925/126‑1 (MQ=255) ccGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCt > 2:685925/1‑126 (MQ=255) ccGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtg < 1:1115161/150‑1 (MQ=255) ccGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtg > 1:459111/1‑150 (MQ=255) gcgGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtggt < 1:508256/150‑1 (MQ=255) cgGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGAGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtggtg < 1:213560/150‑1 (MQ=255) gCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGTCTAGTGGTGGa < 1:807853/150‑1 (MQ=255) gCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGa < 2:235644/150‑1 (MQ=255) gCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGa < 1:573240/150‑1 (MQ=255) atgggggCACCGGCGGAAGGCGTGGGACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGAc < 2:1849336/144‑1 (MQ=255) gAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCCAGTGGGGGGCttt > 2:1361046/1‑149 (MQ=255) aaGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGa < 1:954603/150‑1 (MQ=255) gCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGAtc > 1:1408295/1‑150 (MQ=255) cACCTGCTCAAGGCGTGACACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGCTCACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGAtct < 1:137560/150‑1 (MQ=255) aCCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGAtctc < 2:1141010/150‑1 (MQ=255) ccTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCg > 1:1906719/1‑150 (MQ=255) ccTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCg < 1:668895/150‑1 (MQ=255) ccTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCg < 1:1361046/150‑1 (MQ=255) ccTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTAGCGCAACGCTGGTTCCCGCGAATGGCCTGACCGCGGTAGCGGCAGGCTAGTGGTGGACGTGATCTCg < 2:544047/150‑1 (MQ=37) cTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCgg > 1:1709412/1‑150 (MQ=255) tGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGGCTTGATCTCGGa > 1:590405/1‑150 (MQ=255) tGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGGGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGa > 2:640495/1‑150 (MQ=255) aaGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtggtg > 1:613991/1‑131 (MQ=255) aaGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAgtggtg < 2:613991/131‑1 (MQ=255) aaGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAgcg > 1:872931/1‑150 (MQ=255) aaGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAgcg > 1:881174/1‑150 (MQ=255) aTACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATc < 1:781501/150‑1 (MQ=255) aCCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGa < 1:249592/150‑1 (MQ=255) aCCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGa > 2:249592/1‑150 (MQ=255) aCCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGa > 2:1626249/1‑150 (MQ=255) cgTCGCCTGCTTCGCGGGTAAACCCGCTCCTCCAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTc < 1:123288/150‑1 (MQ=255) cTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCAcctcc > 1:715470/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAgcg > 2:1617194/1‑126 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAgcg < 1:1617194/126‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATcc > 2:1177945/1‑150 (MQ=255) gggTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATcccc < 1:381783/150‑1 (MQ=255) ggTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCg > 1:1402394/1‑150 (MQ=255) gtcaaCCCGCCCCTGCAAAGGTTCGCGCCAGACGTGAGGCCGGTGTAGGCGCGGGTTTACACGCGAAGGGCCGCACCGCGGTAGCGACAGGCTAGTGGTGGACTTGATCTCGGAAGGCTCCACAACCGAGTGCACATCCTGAATCCCCgg > 2:607218/4‑150 (MQ=255) aaCCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCAc > 2:1266552/1‑150 (MQ=255) cccGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGCATGGCACTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGt > 1:593541/1‑150 (MQ=255) cccGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGCGTTCACCTCCTGAATCCCCCGCCCGt > 2:255203/1‑150 (MQ=255) cccGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGGGTAGGCGCGGGTTTACCCGCGAATGGCCTCACTGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCAACAATCGAGTTAACATCCTGAATCCCCGGCACGt > 2:461146/1‑150 (MQ=255) cGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTc < 1:1111823/150‑1 (MQ=255) tACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACcg > 2:1793801/1‑65 (MQ=255) tACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACcg < 1:1793801/65‑1 (MQ=255) tACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGt > 1:918201/1‑150 (MQ=255) aaaGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGtttt > 2:158785/1‑150 (MQ=255) ttCGCGCCAGGCGGGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACTTCCTGAATCCCCGGCACGTTCGACAGCTTCTCgac < 2:1014613/150‑2 (MQ=255) cAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAAc < 2:715470/150‑1 (MQ=255) tGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCAcctcct < 1:627511/106‑1 (MQ=255) tGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCAcctcct > 2:627511/1‑106 (MQ=255) aGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTTGACAGTTTTTCGAAGAAGAACCGCTCGTa < 1:923467/150‑1 (MQ=255) gCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAgg > 2:1904306/1‑150 (MQ=255) gCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAgg > 2:225941/1‑150 (MQ=255) ccGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGc > 1:841960/1‑150 (MQ=255) tAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGAt < 1:640495/150‑1 (MQ=255) cattcgcgGGTAAACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGAt > 1:1364347/5‑150 (MQ=255) attcgcgGGTAAACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTc < 2:507435/108‑1 (MQ=255) attcgcgGGTAAACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTc > 1:507435/4‑111 (MQ=255) attcgcgGGTAAACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCga > 2:965352/4‑124 (MQ=255) attcgcgGGTAAACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGCCACGTTCGACAGTTTTTCga < 1:965352/121‑1 (MQ=255) cgGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGATTTTAGCTCGGCCAGCGCCACCATTGCACTGCCTTCCAGAATCTCCGTCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCGCGAGGTCCGa > 1:1382899/1‑150 (MQ=255) gggTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGAc > 1:911148/1‑150 (MQ=255) ggTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACg > 2:245727/1‑150 (MQ=255) gTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACGt > 1:867611/1‑150 (MQ=255) tttACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTc > 1:767619/1‑102 (MQ=255) tttACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTc < 2:767619/102‑1 (MQ=255) ttACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACGTGa < 1:245727/150‑1 (MQ=255) ttACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACGTGa < 1:1626249/150‑1 (MQ=255) | GGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCTCCTACAAAGGTTCGCGCCAGGCGTGAGGCCGGTGTAGGCGCGGGTTTACCCGCGAATGGCCTCACCGCGGTAGCGGCAGGCTAGTGGTGGACTTGATCTCGGAAAGCGCCACAATCGAGTTCACCTCCTGAATCCCCGGCACGTTCGACAGTTTTTCGAAGAAGAACCGCTCGTAGGCCTCGATGTCCGACGTGA > NC_002947/5918297‑5918594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |