Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,944,276 C→A 5.3% M5I (ATG→ATT)  PP_5211 ← ChaC‑related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,944,2760CA 5.3% 245.5 / 2.5 76M5I (ATG→ATT) PP_5211ChaC‑related protein
Reads supporting (aligned to +/- strand):  ref base C (34/38);  new base A (2/2);  total (36/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01

GGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCTGTGAACTACAGAT  >  NC_002947/5944127‑5944416
                                                                                                                                                     |                                                                                                                                            
ggggTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGAc                                                                                                                                              <  2:1612980/150‑1 (MQ=255)
   gTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGACAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACCCAAAAACAGGCCCGCCCTGGTGCCTGGACATg                                                                                                                                           <  1:1296878/150‑1 (MQ=255)
    tACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATgg                                                                                                                                          <  1:927367/150‑1 (MQ=255)
       cgcgATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTg                                                                                                                                       >  1:1916920/1‑150 (MQ=255)
          gATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCt                                                                                                                                    <  1:1803395/150‑1 (MQ=255)
             gTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTc                                                                                                                                     <  2:1116057/146‑1 (MQ=255)
             gTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTc                                                                                                                                     >  1:1116057/1‑146 (MQ=255)
             gTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCa                                                                                                                                 <  1:306742/150‑1 (MQ=255)
              ttCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCAt                                                                                                                                <  2:1382733/150‑1 (MQ=255)
               ttaTGGGACCACAGGTACAAGGCACGGTGATAGCCATGTACCCGCGCGCGGTGGCGCTCCACCGAATTGCTCTCCGGGCGCTAGATCAACGAGGCATAGGCATACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATg                                                                                                                               <  2:515047/148‑1 (MQ=255)
               tCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATg                                                                                                                               <  1:1767404/150‑1 (MQ=255)
                 aTGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGa                                                                                                                             >  2:1243823/1‑150 (MQ=255)
                 aTGGGACAACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTGATGGa                                                                                                                             >  2:587251/1‑150 (MQ=255)
                  ggggACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAg                                                                                                                            <  2:43258/149‑1 (MQ=255)
                   gggACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGc                                                                                                                           >  1:749177/1‑150 (MQ=255)
                     gACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTg                                                                                                                         >  2:573907/1‑150 (MQ=255)
                       ccACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaa                                                                                                                       <  1:524604/150‑1 (MQ=255)
                       ccACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaa                                                                                                                       >  1:614091/1‑150 (MQ=255)
                        cacaGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaac                                                                                                                      >  1:1002982/1‑150 (MQ=255)
                         acaGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaaca                                                                                                                     >  1:1674972/1‑150 (MQ=255)
                          caGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCAt                                                                                                                                <  2:1691561/138‑1 (MQ=255)
                          caGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCAt                                                                                                                                >  1:1691561/1‑138 (MQ=255)
                              tACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATgg                                                                                                                                          <  2:1445421/124‑1 (MQ=255)
                              tACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATgg                                                                                                                                          >  1:1445421/1‑124 (MQ=255)
                              tACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGt                                                                                                                <  2:147573/150‑1 (MQ=255)
                              tACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGt                                                                                                                <  2:147288/150‑1 (MQ=255)
                               aCAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGtt                                                                                                               >  2:1315238/1‑150 (MQ=255)
                                   gCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTcgcg                                                                                                           >  1:2574/1‑150 (MQ=255)
                                    ccACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGa                                                                                                          <  2:1383140/150‑1 (MQ=255)
                                    ccACGGTGATAGCCATGTACCCCCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGa                                                                                                          <  1:591291/150‑1 (MQ=255)
                                     cACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCACGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAg                                                                                                         >  1:1453147/1‑150 (MQ=255)
                                       cGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGNTGCNTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTa                                                                                                       <  1:1600508/150‑1 (MQ=255)
                                            aTAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTg                                                                                                  >  1:1270244/1‑150 (MQ=255)
                                                      aCCCGCGCGCGCTGCCACACCACCGAATTGCAATCCGCGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGaaa                                                                                        >  2:782838/1‑150 (MQ=255)
                                                        ccGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGAAATGGTTGTCTTCATg                                                                                                                               <  1:1319826/109‑1 (MQ=255)
                                                        ccGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGAAATGGTTGTCTTCATg                                                                                                                               >  2:1319818/1‑109 (MQ=255)
                                                        ccGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGAAATGGTTGTCTTCATg                                                                                                                               <  1:1319818/109‑1 (MQ=255)
                                                        ccGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGAAATGGTTGTCTTCATg                                                                                                                               >  2:1319826/1‑109 (MQ=255)
                                                           cgcgcgcTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAg                                                                                   <  1:1243823/150‑1 (MQ=255)
                                                            gcgcgcTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGt                                                                                  <  1:902885/150‑1 (MQ=255)
                                                                  tGGCGCTCCACCGACTTGCACTCCGGGCGCCAGATCAACGCGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGa                                                                            >  1:617096/1‑150 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGc                                                                                                                           >  1:1050969/1‑95 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGc                                                                                                                           <  2:1050969/95‑1 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACt                                                                                                                  <  1:43966/104‑1 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACt                                                                                                                  >  2:43966/1‑104 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGa                                                                                              >  1:1786903/1‑124 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGa                                                                                              <  2:1786903/124‑1 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGa                                                                    >  1:861279/1‑150 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGa                                                                    <  2:246579/150‑1 (MQ=255)
                                                                          cACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTAGAATTTATGTTGCTGCCCGAAATCAAGTGCCGGAGGGTATGa                                                                    >  1:960030/1‑150 (MQ=255)
                                                                           aCCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaa                                                                                                                       >  1:890637/1‑98 (MQ=255)
                                                                           aCCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGaa                                                                                                                       <  2:890637/98‑1 (MQ=255)
                                                                            ccGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGaaa                                                                  <  1:1315238/150‑1 (MQ=255)
                                                                                 ttGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTcc                                                             <  2:749177/150‑1 (MQ=255)
                                                                                    cACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCaa                                                          <  2:614091/150‑1 (MQ=255)
                                                                                       tCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGGATGAAACTTCCCAAGAc                                                       >  1:188176/1‑150 (MQ=255)
                                                                                            gcgcCAGAGCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAATCTTCCTATGACATACt                                                  <  2:929050/150‑1 (MQ=255)
                                                                                                cAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCa                                              >  2:1136234/1‑150 (MQ=255)
                                                                                                cAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCa                                              >  2:948125/1‑150 (MQ=255)
                                                                                                  gATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAg                                            >  2:1625513/1‑150 (MQ=255)
                                                                                                      aaCGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGcc                                        <  1:1909272/150‑1 (MQ=255)
                                                                                                       aCGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCg                                       >  1:1902924/1‑150 (MQ=255)
                                                                                                                          ccACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATCCTTTCAAGTGCCGACATAAGCTGCCGCCatta                    >  1:1582634/1‑150 (MQ=255)
                                                                                                                          ccACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCatta                    <  2:2574/150‑1 (MQ=255)
                                                                                                                               caGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCt               <  1:1625513/150‑1 (MQ=255)
                                                                                                                                 ggCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCtgt             <  2:1908064/150‑1 (MQ=255)
                                                                                                                                 ggCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCtgt             <  2:861279/150‑1 (MQ=255)
                                                                                                                                   cccgcccTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCTGTGa           >  2:378589/1‑150 (MQ=255)
                                                                                                                                        ccTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCTGTGAACTAc      <  1:573907/150‑1 (MQ=255)
                                                                                                                                         cTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGa                                      >  2:1203904/1‑117 (MQ=255)
                                                                                                                                         cTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGa                                      <  1:1203904/117‑1 (MQ=255)
                                                                                                                                           ggTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACtt                                                               >  1:1445055/1‑90 (MQ=255)
                                                                                                                                           ggTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACtt                                                               <  2:1445055/90‑1 (MQ=255)
                                                                                                                                           ggTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCTGTGAACTACAGa   <  1:1366631/150‑1 (MQ=255)
                                                                                                                                            gTGCCTGGACATGGGTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTGTGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCGATTATTCCTCTGACCTACAGAt  >  2:1250328/1‑150 (MQ=255)
                                                                                                                                                    aCATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGGCCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCaa                                             >  1:1640934/1‑99 (MQ=255)
                                                                                                                                                    aCATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGGCCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCaa                                             <  2:1640934/99‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                            
GGGGTACCGCGATGTTCATGGGACCACAGGTACAAGCCACGGTGATAGCCATGTACCCGCGCGCGCTGGCGCTCCACCGAATTGCACTCCGGGCGCCAGATCAACGAGGCATAGGCAAACAGCCACACAGGCCCGCCCTGGTGCCTGGACATGGTTGTCTTCATGGAGCTGAACAACTGTTCGCGAGTATGTTGCTGACCGAAATCAAGTGCCGGAGGGTATGAAACTTCCCAAGACATACTTTCAAGTGCCGACATAAGCTGCCGCCATTATTCCTGTGAACTACAGAT  >  NC_002947/5944127‑5944416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑