| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,040,850 | T→A | 8.5% | intergenic (+19/+15) | PP_5292 → / ← PP_5293 | catabolite repression control protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,040,850 | 0 | T | A | 8.5% | 295.5 / 14.5 | 104 | intergenic (+19/+15) | PP_5292/PP_5293 | catabolite repression control protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (50/44); new base A (5/4); total (56/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGAA > NC_002947/6040705‑6040996 | ggtCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCa < 2:707331/148‑1 (MQ=255)gTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCa > 2:1248810/1‑150 (MQ=255)gTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCa > 2:1267468/1‑150 (MQ=255)gTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCAATGCa > 1:1504163/1‑150 (MQ=255) tCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGc < 2:641220/150‑1 (MQ=255) cGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGcc < 1:171559/150‑1 (MQ=255) gACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGccc > 1:733490/1‑150 (MQ=255) aCTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGcccc > 2:1554955/1‑150 (MQ=255) tACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCaa > 1:836450/1‑150 (MQ=255) tACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCaa > 2:1781509/1‑150 (MQ=255) tACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTCGCCAGCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCaa > 1:1535178/1‑150 (MQ=255) tccAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCAATGCAGCCCCAAt < 1:1357217/149‑1 (MQ=255) aCCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAAt < 1:1267468/150‑1 (MQ=255) aCCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCAATGCAGCCCCAAt < 2:1504163/150‑1 (MQ=255) aCCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCCTCTGCCACGCTTCTACCCGCATGCTCCGCTGATCGTCG‑ACCATGACTGGTCGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAAt < 2:1894798/150‑1 (MQ=255) ccAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGGTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCGTTGCAGCCCCaagg > 2:1037820/1‑148 (MQ=255) cAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATCGGGGCTGCGGTGCATccccgaagg > 2:1357217/1‑145 (MQ=255) cAGATCCTCACCCCGGGCCTGCGCCGCTCCTTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATgg > 1:1800401/1‑150 (MQ=255) gATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGtt > 2:1373266/1‑150 (MQ=255) ccTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAtt > 2:1674374/1‑150 (MQ=255) cTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAttt < 1:1373266/150‑1 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTg > 1:1260099/1‑150 (MQ=255) tCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCGCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCCTCTAAAAGGCCATTCGGGCTGCATTGCAGCCCCAATGGTTAtttc > 2:15105/1‑149 (MQ=255) ccccctgCCTGCGCCGCGTAGTGCGCAATGCTCGCTTGCCGTGTCAGCCATGCTTCTCCCAGCATGCACCGCTGCGGGTTG‑ACTATGTCTGGCCGCTGCCTATCTATAAGTCCATTGGGGCTCCATTGCTGCCCCAATTGTTATTTGAtt < 2:451096/144‑2 (MQ=255) cccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCg > 1:449170/1‑150 (MQ=255) ccGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCgg > 2:180645/1‑150 (MQ=255) cGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCCTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGgc > 1:767522/1‑150 (MQ=255) gCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGgccgc < 2:1218223/150‑1 (MQ=255) gCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGgccgc < 2:767522/150‑1 (MQ=255) ccTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGgccgcc > 1:1658134/1‑150 (MQ=255) tGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCCCCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAg > 2:46493/1‑150 (MQ=255) gccgcTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGatc > 2:1248678/1‑150 (MQ=255) cgcTTCGTGCGCAACGCTCGCCTGCCGCGTAAGCCACGCTGCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGCCCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGATATTTGATCGGCCGCCAGaccaa > 2:222454/1‑149 (MQ=255) gTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCGCCCCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTa < 1:593338/150‑1 (MQ=255) gTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTCGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTa < 1:1554955/150‑1 (MQ=255) gcAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGa > 1:745443/1‑150 (MQ=255) cGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAg < 1:369018/150‑1 (MQ=255) ccTCGCCTGACGCATCAGCCACGCTTCTCCCAGCATGCACCGCTGACCGTCGCACCA‑GAATCCACCGTCACCATGTAGCGGGCCATTTTGTCTGCAACGATGCCCCAATGGTTATTTTATCGGCCGCCAGATCATCGGGTAGCGATAAgg < 1:1876016/149‑1 (MQ=255) tGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGccc > 2:1326894/1‑150 (MQ=255) ccGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTc > 2:1309466/1‑150 (MQ=255) cgcgTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCa > 1:38407/1‑150 (MQ=255) gcgTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCAt < 2:38047/150‑1 (MQ=255) cAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGc < 1:1248678/150‑1 (MQ=255) gCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTc < 2:1045118/142‑1 (MQ=255) gCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTc > 1:1045118/1‑142 (MQ=255) cACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAATAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGc > 1:1527396/1‑150 (MQ=255) cACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAt < 2:168394/96‑1 (MQ=255) cACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAt > 1:168394/1‑96 (MQ=255) cACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGc > 1:1761109/1‑150 (MQ=255) ttCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGcccc < 1:21722/82‑1 (MQ=255) ttCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGcccc > 2:21722/1‑82 (MQ=255) ttCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCAccgc > 2:1525402/1‑150 (MQ=255) ccAGCATGTACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAtt > 2:199262/1‑87 (MQ=255) ccAGCATGTACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTAtt < 1:199262/87‑1 (MQ=255) cAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgat < 1:180645/150‑1 (MQ=255) aGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatg < 1:1309466/150‑1 (MQ=255) tGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatga > 1:1218454/1‑150 (MQ=255) gCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCTATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatgat < 2:1260099/150‑1 (MQ=255) gCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatgat < 1:183533/150‑1 (MQ=255) gCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgatgat < 1:1525402/150‑1 (MQ=255) ccGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCaa > 2:1300758/1‑150 (MQ=255) cGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAat > 2:1227491/1‑150 (MQ=255) cGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAat < 1:1248810/150‑1 (MQ=255) gCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAata < 2:836450/150‑1 (MQ=255) gCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAata < 2:1535178/150‑1 (MQ=255) aTCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATatcat < 1:1300758/150‑1 (MQ=255) tcg‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACt > 2:1561883/1‑150 (MQ=255) aTGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCAcc > 1:372261/1‑150 (MQ=255) aTGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCAcc > 1:1259644/1‑150 (MQ=255) tGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGt < 2:1351107/84‑1 (MQ=255) tGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGt > 1:1351107/1‑84 (MQ=255) gACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCa > 2:63360/1‑150 (MQ=255) aCGCTGACCATCTAGAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACAGCTTGGATGATGATCAATATCATCACTGCCACCGTGAGCAt < 2:66913/150‑1 (MQ=255) cGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATg < 2:277443/150‑1 (MQ=255) gCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgg < 2:733490/150‑1 (MQ=255) gCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATgg < 2:1309012/150‑1 (MQ=255) cTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGc < 2:1761109/150‑1 (MQ=255) aCCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCaaa < 2:1521809/150‑1 (MQ=255) cATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAAcc > 2:371749/1‑149 (MQ=255) cATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACa > 2:1090279/1‑150 (MQ=255) tCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCgatgat < 1:1620513/110‑1 (MQ=255) cTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCa < 1:166076/150‑1 (MQ=255) ggCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGcc > 1:1747431/1‑150 (MQ=255) gCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGccc < 1:1090279/150‑1 (MQ=255) gCCATTGGGGCTGCATTGCAGCCCCAATGGGTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGccc > 1:521374/1‑150 (MQ=255) cATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCAATGCCACCGTTAGCATGGTAAACAGCACCAGCCCGa < 1:1781509/150‑1 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCAt > 1:1638577/1‑129 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCAt < 2:1638577/129‑1 (MQ=255) aTTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 1:421651/1‑150 (MQ=255) aTTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCCCCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGACAAAAAGCACCAgtgccat > 2:1848003/1‑144 (MQ=255) aTTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATg < 2:1216159/130‑1 (MQ=255) aTTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATg > 1:1216159/1‑130 (MQ=255) aTTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 1:484871/1‑150 (MQ=255) aTTGGGGCTGCAATGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCACGGTAAAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGAt > 1:1572671/1‑150 (MQ=255) ggCTGCATTGCAGCTCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAaca < 2:278411/150‑1 (MQ=255) ggCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAaca > 1:68284/1‑150 (MQ=255) ggCTGCATTGCAGCCCCAATGGTTATCTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAaca < 1:1282490/150‑1 (MQ=255) tGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGa > 1:336392/1‑150 (MQ=255) tGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGa < 2:1229134/150‑1 (MQ=255) gCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGaa > 2:794724/1‑150 (MQ=255) | GTTCGACTACCAGATCCTCACCCCGGGCCTGCGCCGCTTCGTGCGCAACGCTCGCCTGCCGCGTCAGCCACGCTTCTCCCAGCATGCACCGCTGATCGTCG‑ACTATGACTGGACGCTGACCATCTAAAAGGCCATTGGGGCTGCATTGCAGCCCCAATGGTTATTTGATCGGCCGCCAGATCATCGGGTAGCGATAAGGCTTGCCCTCATTCGCCCGCACCGCCGCGATGATGATCAATATCATCACTGCCACCGTGAGCATGGCAAACAGCACCAGCCCGATAAACACGAA > NC_002947/6040705‑6040996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |