| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,043,722 | T→A | 7.2% | intergenic (+18/+16) | gmk → / ← PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,043,722 | 0 | T | A | 7.2% | 243.7 / 8.6 | 83 | intergenic (+18/+16) | gmk/PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Reads supporting (aligned to +/- strand): ref base T (39/38); new base A (2/4); total (41/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
ACTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAG > NC_002947/6043574‑6043869 | aCTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAtt > 1:581021/1‑150 (MQ=255) tACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGc > 2:1717738/1‑150 (MQ=255) cGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAg < 1:72994/150‑1 (MQ=255) gTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGc < 1:26031/150‑1 (MQ=255) gTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGc < 1:734361/150‑1 (MQ=255) gTCATCATCAATGATGATTTCGACACGACTCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGc > 2:401219/1‑150 (MQ=255) tcatcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAGTCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGcc < 1:1224231/150‑1 (MQ=255) tcatcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGcc > 2:114229/1‑150 (MQ=255) catcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGccc < 2:1728078/150‑1 (MQ=255) atcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAAt > 1:1761153/1‑150 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGCGAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGt > 1:1590637/1‑150 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGCCCCatcgat < 1:246311/150‑6 (MQ=255) atgatgATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt < 1:1541465/150‑1 (MQ=255) gatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTc < 1:1717738/150‑1 (MQ=255) atTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTcc > 2:1565456/1‑150 (MQ=255) atTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTcc < 2:1615615/150‑1 (MQ=255) acacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGc > 1:695714/1‑150 (MQ=255) gcgcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCaa > 1:1369155/1‑150 (MQ=255) cAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGcc > 1:1682353/1‑150 (MQ=255) aCTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGCCCCat < 1:1042642/118‑2 (MQ=255) aCTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCAATGCAGCCCCat > 2:1042642/1‑117 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAACAGAACGGCGGTAGGCCTGCAGCGGCAAGGTAGCctgctg > 2:628281/1‑150 (MQ=255) tGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAAATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGa < 2:1211532/150‑1 (MQ=255) gAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGAc > 1:1734967/1‑150 (MQ=255) tgtTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTa < 1:1749850/150‑1 (MQ=255) tgtTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTa > 2:519998/1‑150 (MQ=255) gCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCg > 2:911367/1‑150 (MQ=255) cTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCTTCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGa < 1:628281/150‑1 (MQ=255) tCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAg < 1:911367/150‑1 (MQ=255) tCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAg < 1:156947/150‑1 (MQ=255) gAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGa > 1:1695619/1‑150 (MQ=255) aaTCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCCCAGTCCGTTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGaa < 2:1590637/150‑1 (MQ=255) aTCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAg > 1:1906007/1‑134 (MQ=255) aTCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAg < 2:1906007/134‑1 (MQ=255) ggCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTAc < 2:1734967/150‑1 (MQ=255) ggCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTAc < 2:1813934/150‑1 (MQ=255) gctgctgctGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGTAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACg > 2:1278781/1‑150 (MQ=255) gctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCg < 2:1369155/150‑1 (MQ=255) ctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAg > 2:1115465/1‑128 (MQ=255) ctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAg < 1:1115465/128‑1 (MQ=255) gaagaaGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgcac < 1:274270/150‑1 (MQ=255) aagaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt < 1:1819458/85‑1 (MQ=255) aagaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt > 2:1819458/1‑85 (MQ=255) aagaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGGTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGggcacg > 2:125118/1‑150 (MQ=255) gaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgcacgca > 2:178322/1‑150 (MQ=255) aagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCAt < 1:178322/150‑1 (MQ=255) aagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCAt < 2:1695619/150‑1 (MQ=255) agcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCa < 1:1181944/115‑1 (MQ=255) agcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCa > 2:1181944/1‑115 (MQ=255) gcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATgc > 1:1321996/1‑150 (MQ=255) gcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATgc < 2:1397468/150‑1 (MQ=255) agcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATgcgc < 1:519998/150‑1 (MQ=255) agcagcGTCAGGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGCACGCCGGCGCACGCATGCCCGAc > 2:845413/1‑150 (MQ=255) gcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGTTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTTCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa < 1:667465/150‑1 (MQ=255) gcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa < 2:581021/150‑1 (MQ=255) gcagcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa < 1:401219/150‑1 (MQ=255) agcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGc > 2:293859/1‑150 (MQ=255) gcGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGca < 1:788743/150‑1 (MQ=255) tCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 1:1107697/70‑1 (MQ=255) tCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa > 2:1107697/1‑70 (MQ=255) aTGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGCAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGcataagc > 2:932232/1‑146 (MQ=255) tGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCAtcatca < 1:1477937/150‑1 (MQ=255) gCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCCGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGcc > 2:1343361/1‑150 (MQ=255) aTTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGCCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGCAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGa < 1:1036378/150‑1 (MQ=255) cTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGcc > 2:1029279/1‑150 (MQ=255) tCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGcc > 2:1184563/1‑45 (MQ=255) tCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGcc < 1:1184563/45‑1 (MQ=255) tCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCa > 1:544961/1‑150 (MQ=255) aaaGGAAATGATCGGCTGAAGATTGATGGGGCTGCATTGCCGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGCGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGCCCGAGGCCaa < 2:1761153/149‑1 (MQ=255) aaGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAg > 2:1470996/1‑150 (MQ=255) aaGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGAAGAGTAGAACCAAATAAGTACTCCCGGGCGCTCATGCGCGACAGCATCATCAGGCCGATGCCAAg < 1:1470996/150‑1 (MQ=255) tCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCga > 2:358261/1‑146 (MQ=255) tCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCga < 1:358261/146‑1 (MQ=255) ggCTGAAGAACGATGGGGCCGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAgatgat > 2:174642/1‑150 (MQ=255) gCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATc > 2:1570872/1‑150 (MQ=255) aaGACCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCgg < 1:114229/150‑1 (MQ=255) aTCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCaa > 2:1347379/1‑150 (MQ=255) ttGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGa > 1:829334/2‑119 (MQ=255) ttGGGGCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGa < 2:829334/118‑1 (MQ=255) ggggCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgcg > 2:208664/1‑140 (MQ=255) ggggCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgcg < 1:208664/140‑1 (MQ=255) cTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAacac > 2:600507/1‑150 (MQ=255) tGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACAcc > 1:903781/1‑150 (MQ=255) cATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACAccag > 1:167165/1‑150 (MQ=255) | ACTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGCTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAG > NC_002947/6043574‑6043869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |