| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,049,498 | A→T | 6.8% | K102* (AAG→TAG) ‡ | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,049,498 | 0 | A | T | 6.8% | 273.7 / 9.2 | 88 | K102* (AAG→TAG) ‡ | spoT | bifunctional (p)ppGpp synthase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (34/48); new base T (4/2); total (38/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 | |||||||||||
GCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTC > NC_002947/6049351‑6049646 | gCCACCATCCCCGCCGACATGCACATGGGCCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAg < 1:1347728/150‑1 (MQ=255) ccAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCTGCCCGCAGCTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGc < 1:904431/150‑1 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCt > 2:1222393/1‑150 (MQ=255) cAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCt > 1:1503332/1‑150 (MQ=255) gCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 2:1282464/150‑1 (MQ=255) gCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 2:1812627/150‑1 (MQ=255) gCAGCCTCGCCGACATGCACATGGACCATCAGAGCCGGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGa < 2:276398/150‑1 (MQ=255) cATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGAc > 1:1500938/1‑150 (MQ=255) aTCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGAcc < 1:1895512/150‑1 (MQ=255) ccTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCa < 2:1670816/150‑1 (MQ=255) cTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCTTGCTGAcccca < 1:1274134/150‑3 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa < 1:1551102/150‑1 (MQ=255) tCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATAGCCGAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACGGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGa > 1:601564/1‑150 (MQ=255) cGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGAt < 1:64818/150‑1 (MQ=255) cGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGAt < 1:820175/150‑1 (MQ=255) gCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCga < 1:1622023/150‑1 (MQ=255) cacaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTGTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgag > 2:822938/1‑150 (MQ=255) acaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga > 1:874502/1‑150 (MQ=255) acaTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga < 1:828121/150‑1 (MQ=255) caTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGAc < 1:685862/150‑1 (MQ=255) gACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAg < 1:1357318/150‑1 (MQ=255) gACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAg > 2:557820/1‑150 (MQ=255) ccATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGc < 2:1503332/150‑1 (MQ=255) cATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGcc > 2:1008765/1‑150 (MQ=255) aTCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCg > 1:830107/1‑150 (MQ=255) tCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGa > 1:1001317/1‑150 (MQ=255) tCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAG‑TTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAg < 2:894370/150‑1 (MQ=255) gagCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGgc < 1:1033946/150‑1 (MQ=255) gagCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGgc > 2:380355/1‑150 (MQ=255) ccTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCa < 1:735842/150‑1 (MQ=255) cTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAg < 2:1583411/150‑1 (MQ=255) tGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAgg > 2:756797/1‑150 (MQ=255) gagggcggcCATGCTGCACGATGTGAGCGAAGACACCGGGATCGCCAAGTAATCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGAGCCAGATGAATCCCGAGACCAAGGCCGAGGCGCAGGc < 2:1552343/147‑1 (MQ=255) gaggcCATGCTGCAAGATGTGATAGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGaa < 2:874502/148‑1 (MQ=255) gcCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAAc > 2:532384/1‑150 (MQ=255) gcACGATGTGATCGAAGACATCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa < 1:1896982/150‑1 (MQ=255) gcACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTAACCCGACCGTGGCGGCACCGGTCGAGGGGTTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa > 1:231918/1‑150 (MQ=255) aCGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaaga < 1:984287/150‑1 (MQ=255) aCGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaaga < 2:1369069/150‑1 (MQ=255) cGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGat < 1:3016/150‑1 (MQ=255) aTGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatgg < 2:956826/150‑1 (MQ=255) gATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccat < 2:1500938/150‑1 (MQ=255) aTCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatg < 2:335004/150‑1 (MQ=255) aTCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCCAAAGCGGAAAACTTCCAGAAGatggccatg < 1:50733/150‑1 (MQ=255) cGAAGACACCGGCATCGCCAAGGAAGCCATCAGGCATTAGTTTATCGACTCCACGTCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggc > 1:239674/1‑150 (MQ=255) gAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGCATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTc < 1:1076468/132‑1 (MQ=255) gAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGTATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggcc > 1:498450/1‑150 (MQ=255) gAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTc > 2:1076468/1‑132 (MQ=255) acCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCTAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggccatggccatggcc < 1:214399/150‑1 (MQ=255) aTCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCga < 2:1399639/89‑1 (MQ=255) aTCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGGCAGCAAGCTGACCCAGATGAATTTCga > 1:1399639/1‑89 (MQ=255) gCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa > 1:299919/1‑122 (MQ=255) gCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCagaa < 2:299919/122‑1 (MQ=255) cAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCcg > 1:174189/1‑150 (MQ=255) aaGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCcgc < 2:174189/150‑1 (MQ=255) aGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCcgcg < 2:290982/150‑1 (MQ=255) aaGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGa < 1:530370/150‑1 (MQ=255) ccTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCt > 2:423738/1‑150 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTg < 2:479955/150‑1 (MQ=255) cTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTg > 1:555450/1‑150 (MQ=255) tCAGCCAGCAGTTTGGCGGGACCGTGGCCGAATTGCTCGATGGGGTCAGCAAGCTGCCCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGCAGATGGCCATGGCCCTGGCCCGCGATATCCGCGTGATCCTgg < 2:563816/150‑1 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggcca > 2:1555492/1‑117 (MQ=255) tCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGatggcca < 1:1555492/117‑1 (MQ=255) cagccagcAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGt < 2:1785651/150‑1 (MQ=255) agccagcAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAGAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTc < 1:380355/150‑1 (MQ=255) agccagcAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTc > 2:1180761/1‑150 (MQ=255) agcagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGc > 2:1865553/1‑150 (MQ=255) agcagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGc > 2:1840290/1‑150 (MQ=255) gcagTTTAGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCt < 1:557820/150‑1 (MQ=255) cagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACGCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTg < 2:1001317/150‑1 (MQ=255) cagTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTg > 1:1160241/1‑150 (MQ=255) agaCCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCAGAAAACTTCCAGCATATGTCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGcc < 1:234381/150‑1 (MQ=255) gaCCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCt < 2:239674/150‑1 (MQ=255) aCCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga > 2:1897084/1‑55 (MQ=255) aCCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCgaga < 1:1897084/55‑1 (MQ=255) catGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGca > 2:940603/3‑150 (MQ=255) gCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCacaac > 2:1524590/1‑150 (MQ=255) gAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCACGTGATCCTGGTCAAGCTGGCCGACCCCCCGCACAACATg > 2:265441/1‑150 (MQ=255) tctgggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTgg > 2:656607/4‑150 (MQ=255) tctgggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTgg > 2:317322/4‑150 (MQ=255) tgggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGaa < 1:656607/149‑1 (MQ=255) tgggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGaa > 2:1702912/2‑150 (MQ=255) tgggTCAGCTTGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGaa > 2:1112402/2‑150 (MQ=255) gccAGCAAGCTGACCCAGCTGAATTTAGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGTGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCAAAACATGCGCACCCTGGAAGTg > 2:963158/3‑150 (MQ=255) tCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGc > 1:1208005/1‑150 (MQ=255) cAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCacaac < 1:1264140/127‑1 (MQ=255) cAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCacaac > 2:1264140/1‑127 (MQ=255) cAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTc < 2:555450/150‑1 (MQ=255) | GCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCAGCAAGCTGACCCAGATGAATTTCGAGACCAAGGCCGAGGCGCAGGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCCTGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTC > NC_002947/6049351‑6049646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |