| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,173,262 | C→T | 5.5% | intergenic (‑125/+65) | PP_5410 ← / ← glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,173,262 | 0 | C | T | 5.5% | 265.6 / 2.8 | 89 | intergenic (‑125/+65) | PP_5410/glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (42/41); new base T (2/3); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGTGTGTTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTC > NC_002947/6173117‑6173410 | tggtgTGTTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCgcgc > 2:189420/1‑150 (MQ=255) gtgtgtTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCa > 1:850275/1‑150 (MQ=255) cgtttcgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGATGACATTCATATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATaaaaaa < 2:1205137/150‑1 (MQ=255) gtttcgACATGTGAGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAg > 2:119855/1‑150 (MQ=255) tttcgACATGTGCGTTTAAGTTTCGATTCGAAAGGTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGAACATTGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGc > 1:496487/1‑150 (MQ=255) cgACCTGTGCGTTTAAGTTTCGCTTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGa < 2:950029/150‑1 (MQ=255) tgCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCACAAGATAATCCGGGTAAGTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTc < 2:1483364/150‑1 (MQ=255) gCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTca < 1:1694199/150‑1 (MQ=255) tAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATaa < 1:189420/150‑1 (MQ=255) tttCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCg < 2:1571167/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCATATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATGTGAATAAGTCgg < 2:175785/150‑1 (MQ=255) tcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGc > 1:1350261/1‑150 (MQ=255) gattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGTATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCtt > 2:445019/1‑150 (MQ=255) gattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCtt > 2:1675741/1‑150 (MQ=255) ttcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTc > 2:512931/1‑150 (MQ=255) ttcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTc < 1:1343789/150‑1 (MQ=255) tcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCGGCTGCGCCtata < 2:1789013/116‑1 (MQ=255) tcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCGGCTGCGCCtata > 1:1789013/1‑116 (MQ=255) ttAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGaaa > 1:1902052/1‑150 (MQ=255) ttAATGGTTGCAAGCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGaaa < 2:81455/150‑1 (MQ=255) tAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAg > 2:1611539/1‑150 (MQ=255) aTGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAggg > 2:1176722/1‑150 (MQ=255) gTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtg < 1:1229589/150‑1 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCaa < 1:1801061/100‑1 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCaa > 2:1801061/1‑100 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCaa > 2:826359/1‑100 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCaa < 1:826359/100‑1 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt > 2:757102/1‑150 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt < 1:1115738/150‑1 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt > 1:252666/1‑150 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAg < 2:802066/138‑1 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAg > 1:802066/1‑138 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATaa > 2:1855392/1‑150 (MQ=255) cAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATCAc > 1:927790/1‑150 (MQ=255) aaaaCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACt < 1:757102/150‑1 (MQ=255) tAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGctc > 1:1880374/1‑150 (MQ=255) aaGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGctct > 1:877338/1‑150 (MQ=255) aGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtctt < 2:22457/150‑1 (MQ=255) aCGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttct < 1:1019719/150‑1 (MQ=255) gcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTc > 2:1882602/1‑97 (MQ=255) gcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTc < 1:1882602/97‑1 (MQ=255) cgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAtc < 2:1902052/150‑1 (MQ=255) gATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttct > 1:1594381/1‑144 (MQ=255) gATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttct < 2:1594381/144‑1 (MQ=255) aTTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAtctt > 1:362060/1‑150 (MQ=255) aaGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCggg > 2:1397943/1‑150 (MQ=255) cTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATCGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTCCTCCGGtcgc < 2:549773/150‑1 (MQ=255) tGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt > 2:1124780/1‑114 (MQ=255) tGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt < 1:1124780/114‑1 (MQ=255) tCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATg < 2:329293/101‑1 (MQ=255) tCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATg > 1:329293/1‑101 (MQ=255) tCGCTGACCTGCGCAATGTTTGACACTCCTTCGCGGCGCTACTCTAGGCCGAGCCGCGCAAATAAACCCGCCGACTAATTCACAGAAGACGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTc < 2:399697/150‑1 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAtc > 1:793169/1‑133 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGAtc < 2:793169/133‑1 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCa < 1:1157074/150‑1 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCa > 2:758989/1‑150 (MQ=255) aCCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGccc < 1:758989/150‑1 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGAc < 1:1216280/67‑1 (MQ=255) cTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGAc > 2:1216280/1‑67 (MQ=255) gttgATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATCCACATAAGGCGGCTTTCGATGGAAAGGCCTGTGCATAACTCAGCACTTCTTGATCTTCTCCGCGCCCTTCCAGCCCGaaa > 2:634144/4‑150 (MQ=255) tgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACCTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAAt > 2:334470/1‑150 (MQ=255) gATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGt < 1:476556/150‑1 (MQ=255) aTTGTTTGCTTCTGCTTTGAGTCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 2:1877793/150‑1 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGTTGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 1:959161/150‑1 (MQ=255) ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt > 1:368795/1‑97 (MQ=255) ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt < 2:368795/97‑1 (MQ=255) ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTg < 1:692456/150‑1 (MQ=255) tGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgc < 1:1386841/150‑1 (MQ=255) tttGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCAGCGCCAATAAAAAAGCAGACTTATGCACATAAGCCGGCTTTCGATGGGAAGGGCTGTGAATAACTCATCTCTTCTTGATCTTCTCCGGGAACCTTCAGCCCGAAATGTTgcgc > 1:1533716/1‑150 (MQ=255) tGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTg < 1:487256/150‑1 (MQ=255) tGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTg < 1:445019/150‑1 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGa < 2:1151955/108‑1 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGa > 1:1151955/1‑108 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcg > 1:663340/1‑150 (MQ=255) tGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcgc > 1:614845/1‑150 (MQ=255) cTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCAc < 2:1350261/150‑1 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 1:557694/1‑150 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 2:889490/1‑150 (MQ=255) tgggggCGGTCCTATAGGCGCACCCCCGCCAATAAAAAAGCTGAATTAAAAGCATAAGTCGGCTTTCGATGGTAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCTGGCGCTTCCAGCCCCAAATGTTGCGCTGGCGCGCACgg < 2:529145/146‑1 (MQ=255) gCGGTCCTATATGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTAc > 2:1917397/1‑150 (MQ=255) ccTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCa < 1:1855392/150‑1 (MQ=255) ttattggCGCGGCTGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGc > 2:65162/6‑141 (MQ=255) ttattGGCGCGGCTGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGc < 1:65162/140‑1 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg > 1:361586/1‑150 (MQ=255) ataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGt > 1:729037/1‑150 (MQ=255) gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCCCATAAGGCGGCAGTCGATGGCAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGGACGGGCTACAGCCAGGTCAcc > 2:726559/1‑150 (MQ=255) gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc < 2:729037/150‑1 (MQ=255) gCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCa < 1:1248936/138‑1 (MQ=255) gCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCa > 2:1248936/1‑138 (MQ=255) ccGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTc < 1:1675741/150‑1 (MQ=255) | TGGTGTGTTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTC > NC_002947/6173117‑6173410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |