| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 492,323 | G→A | 7.4% | A34V (GCC→GTC) | lptD ← | LPS‑assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 492,323 | 0 | G | A | 7.4% | 208.8 / 4.5 | 75 | A34V (GCC→GTC) | lptD | LPS‑assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base G (33/36); new base A (3/3); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTGGG > NC_002947/492176‑492467 | tCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCt > 2:1601381/1‑150 (MQ=255)tCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACt > 2:1613717/1‑150 (MQ=255) cGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGc < 1:629274/150‑1 (MQ=255) cGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGc < 2:1087525/150‑1 (MQ=255) cGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGc > 1:1904289/1‑150 (MQ=255) cGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGCTGTTGACCGGGGTTTTGGGCTCGCAGCCCCAACCACCGCCGTCGCCCACTTGGCAGTCGAACTGTTCGGCTGc < 2:819616/150‑1 (MQ=255) gCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACTGcc < 1:1613717/150‑1 (MQ=255) gCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTCACCGGTGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGcc > 1:1555094/1‑150 (MQ=255) tggttCGGGTTCGGCCGGCGGTTCGGTGGCGGGGCCGGCGGCTGGCCCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACTGCCaa < 2:1327269/147‑2 (MQ=255) tttCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCt < 1:418788/143‑1 (MQ=255) tttCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCt > 2:418788/1‑143 (MQ=255) tttCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGCCGGACACTTGGCAGCCGACCAGTTCGACTGCCaagg > 1:1327269/1‑147 (MQ=255) gCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTAt < 1:983879/150‑1 (MQ=255) gCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACTGCCaa > 1:10350/1‑142 (MQ=255) gCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACTGCCaa < 2:10350/143‑2 (MQ=255) cTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATg > 2:484299/1‑150 (MQ=255) ttCGCCCGCCGCTGCGGTGGCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGa > 2:787990/1‑150 (MQ=255) ccgccgCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGgggg > 1:754178/1‑150 (MQ=255) ccgcTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCa < 2:1897778/150‑1 (MQ=255) gcTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCaga < 2:1280025/150‑1 (MQ=255) cTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCagag < 1:526514/150‑1 (MQ=255) gcGGTGCCGGCGCTGACGGGTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAGCCACCGGCGGCGGACACTTGGCAGTCGACCTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGt < 2:704317/149‑1 (MQ=255) ccGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAgg < 2:1352523/150‑1 (MQ=255) gAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGcc < 2:164467/150‑1 (MQ=255) aGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCca < 2:1904289/150‑1 (MQ=255) gCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCcag < 1:364424/150‑1 (MQ=255) cTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCcagc < 1:484299/150‑1 (MQ=255) tGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgcc > 2:1156026/1‑150 (MQ=255) tGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgcc > 1:597325/1‑150 (MQ=255) gCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgccg < 1:1414879/150‑1 (MQ=255) cTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCagag > 1:1460340/1‑123 (MQ=255) cTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCagag < 2:1460340/123‑1 (MQ=255) ttCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTAc < 1:271923/150‑1 (MQ=255) aCCGGCCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAAc < 2:243268/150‑1 (MQ=255) ggCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGaa > 1:733831/1‑150 (MQ=255) ggTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACttt > 1:1464313/1‑150 (MQ=255) tGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCt > 1:1460131/1‑150 (MQ=255) gCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTc > 2:869751/1‑147 (MQ=255) gCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTc < 1:869751/147‑1 (MQ=255) gCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTAc > 2:1699831/1‑150 (MQ=255) gttgttGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGaaa > 1:1425094/1‑150 (MQ=255) ttgACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAAcgcg > 1:282623/1‑150 (MQ=255) gACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAgg > 2:629904/1‑100 (MQ=255) gACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAgg < 1:629904/100‑1 (MQ=255) gACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCggg < 2:1137394/150‑1 (MQ=255) gACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCggg < 1:245916/150‑1 (MQ=255) aCTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCgggg > 2:622133/1‑150 (MQ=255) gggTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGAtt > 1:377596/1‑150 (MQ=255) ttttGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGc > 2:779689/1‑79 (MQ=255) ttttGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGc < 1:779689/79‑1 (MQ=255) ttttAGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCa > 2:1817560/1‑150 (MQ=255) tttGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCaa < 2:597325/150‑1 (MQ=255) tGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATg < 1:1156026/150‑1 (MQ=255) gCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCa > 1:150042/1‑150 (MQ=255) cTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCAt < 1:787990/150‑1 (MQ=255) cTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCAt < 2:150042/150‑1 (MQ=255) ttGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATc < 2:1464313/150‑1 (MQ=255) aGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCttat < 2:89302/150‑1 (MQ=255) gTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCttatt > 1:1016329/1‑150 (MQ=255) tCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCttatta < 2:1721218/150‑1 (MQ=255) ccAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGt > 2:1805036/1‑150 (MQ=255) cAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCaga < 2:389670/66‑1 (MQ=255) cAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCaga > 1:389670/1‑66 (MQ=255) cAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTc > 2:851175/1‑150 (MQ=255) cggcggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGc < 1:1661711/130‑1 (MQ=255) cggcggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGc > 2:1661711/1‑130 (MQ=255) cggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCt < 1:1621212/150‑1 (MQ=255) ggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGACAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGt > 2:456873/1‑150 (MQ=255) acTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCa < 1:851175/150‑1 (MQ=255) ttGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATc > 2:786016/1‑150 (MQ=255) gTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCcg > 2:457368/1‑150 (MQ=255) gAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCgt < 2:377596/150‑1 (MQ=255) aaCTGTTCGGCTGCCACTACGTAGGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCAcgcgag > 2:1434778/1‑148 (MQ=255) tGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTgg > 2:1248741/1‑150 (MQ=255) gTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTggg < 2:1309930/150‑1 (MQ=255) | TCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTGGG > NC_002947/492176‑492467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |