| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 634,122 | A→T | 5.7% | Q142L (CAG→CTG) | PP_0546 → | sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 634,122 | 0 | A | T | 5.7% | 216.0 / 3.4 | 70 | Q142L (CAG→CTG) | PP_0546 | sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (26/40); new base T (2/2); total (28/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
GCTGACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGT > NC_002947/633973‑634271 | gctgACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCa < 2:1620194/150‑1 (MQ=255) ctgACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAg < 1:345122/150‑1 (MQ=255) cGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCt < 1:248137/150‑1 (MQ=255) cGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCACCCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCt < 1:1261741/150‑1 (MQ=255) cGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCACCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCt < 1:789789/150‑1 (MQ=255) gACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGACTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑g > 2:1896036/1‑150 (MQ=255) gACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGGGGCTGGGCGCTGACTGGAGCGGGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGGCGAGCGCCAGgcgccg > 1:1756056/1‑148 (MQ=255) gCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAcc < 2:672822/150‑1 (MQ=255) gCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAcc > 2:1089855/1‑150 (MQ=255) cccGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGAGTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAcca < 2:85449/150‑1 (MQ=255) gcgGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccatcc < 1:83202/150‑1 (MQ=255) gcgGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccatcc > 1:1371749/1‑150 (MQ=255) ggggTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GAccatcctt < 2:1918840/150‑3 (MQ=255) gATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGaa < 2:494574/150‑1 (MQ=255) aTCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAAc < 2:1843493/150‑1 (MQ=255) tCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACg > 2:1371752/1‑150 (MQ=255) ccTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGa < 1:358818/150‑1 (MQ=255) cTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAg < 2:142093/150‑1 (MQ=255) cTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAg > 2:1830945/1‑150 (MQ=255) tCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTTTTGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGc > 2:268571/1‑150 (MQ=255) aaTTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCAc > 2:910655/1‑150 (MQ=255) gCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTcc < 1:164258/150‑1 (MQ=255) gCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTcc < 1:161722/150‑1 (MQ=255) tCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTg > 1:1428526/1‑150 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc < 1:1371752/150‑1 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc < 2:694616/150‑1 (MQ=255) gTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGcc > 2:1554661/1‑150 (MQ=255) ccccGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGa < 2:1692273/132‑1 (MQ=255) ccccGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGa > 1:1692273/1‑132 (MQ=255) ggcgCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGGGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGa < 1:850397/150‑1 (MQ=255) cTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGaa < 1:1223469/111‑1 (MQ=255) cTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGaa > 2:1223469/1‑111 (MQ=255) cTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTc < 1:808347/150‑1 (MQ=255) ttCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGAc > 2:1835728/1‑143 (MQ=255) ttCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGAc < 1:1835728/143‑1 (MQ=255) gCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAccagac < 2:1050169/98‑4 (MQ=38) gCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTC‑AGCGCCTGGCGCTCGAccagac > 1:1050169/1‑95 (MQ=38) gCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCg < 1:428428/150‑1 (MQ=255) ccGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCgg < 2:758857/150‑1 (MQ=255) cGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgt < 2:1728419/150‑1 (MQ=255) gggCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGgtg < 2:1371749/150‑1 (MQ=255) gtgGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGa > 1:2578/1‑150 (MQ=255) tgGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGAc < 1:1089855/150‑1 (MQ=255) gCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCTATCAGAACGAGCAATTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTCTTCGAccc > 2:1039259/1‑150 (MQ=255) ggCGCTGACTTGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCAt < 1:454449/150‑1 (MQ=255) gcgcTGACTGGAGCGAGGCGCGCGAGTGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATg > 2:170660/1‑150 (MQ=255) gcTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGc > 1:1052698/1‑150 (MQ=255) tGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACGTCCGTGGCCGTCACACCGGGCTCACCTGCTCGGCCAGCCCGCTGTTCGACCCGCATGGCgg > 2:600474/1‑149 (MQ=255) aCTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGAcc > 2:1415716/1‑150 (MQ=255) aCTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGAcc < 1:1799990/150‑1 (MQ=255) cTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACct < 2:1428526/150‑1 (MQ=255) gAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTg < 1:467242/89‑1 (MQ=255) gAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTg > 2:467242/1‑89 (MQ=255) aGCGGGGCGCGCGAGCGCACCAATGGCCTCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACctgctg < 1:600474/150‑1 (MQ=255) gAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCg < 1:874021/150‑1 (MQ=255) gcgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCt < 2:94517/150‑1 (MQ=255) cgcgAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTc < 2:1861504/150‑1 (MQ=255) cACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTc < 1:910655/150‑1 (MQ=255) ccAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGAc < 2:399956/143‑1 (MQ=255) ccAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGAc > 1:399956/1‑143 (MQ=255) cAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCctc > 2:888162/1‑150 (MQ=255) gCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTgcgc < 2:1862378/150‑1 (MQ=255) aTCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTgcgcgc > 2:609148/1‑150 (MQ=255) tCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCCTGGCGAACTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGcc > 1:679700/1‑150 (MQ=255) cGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GTCCATCCATCAGAACGAGCACTTCCGTGGCCGTCACCCCGGGCTGACCTGCTCTGCCAGCCTGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGccc < 2:450936/150‑1 (MQ=255) cGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGccc < 1:673598/150‑1 (MQ=255) ggCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCGCGACGTGTCCTCTGCGCGcccc > 2:259945/1‑150 (MQ=255) tCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATc > 2:392900/1‑150 (MQ=255) tGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATcgc < 2:2578/150‑1 (MQ=255) tggtcaGCGCCTGGCGCTCGACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATcgc > 2:570516/6‑150 (MQ=255) cAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAg < 1:698823/150‑1 (MQ=255) aGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGt > 2:1817095/1‑150 (MQ=255) | GCTGACCGACGCCCGCGGGGTGATCCTCAATTGCGTCAGTGCCCCCGCCGAGCGGCGCAGCTTCGAGCGTGCCGGGCTGTGGCTGGGCGCTGACTGGAGCGAGGCGCGCGAGGGCACCAATGGCATCGGCACATGTCTGGTCGAGCGCCAGGCGCT‑GACCATCCATCAGAACGAGCACTTCCGTGGCCGTCACACCGGGCTGACCTGCTCGGCCAGCCCGGTGTTCGACCCGCATGGCGACCTGCTGGCGGTGCTCGACGTGTCCTCTGCGCGCCCCGACGTATCGCGGCAAAGCCAGT > NC_002947/633973‑634271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |