Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	790,960	T→A	6.6%	Q46L (CAG→CTG)	PP_0677 ←	lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	790,960	0	T	A	6.6%	254.3 / 5.7	87	Q46L (CAG→CTG)	PP_0677	lipoprotein
Reads supporting (aligned to +/- strand):  ref base T (39/42);  new base A (3/3);  total (42/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GAAGCGCTCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGCCACAAA  >  NC_002947/790812‑791105                                                                                                                                                     |                                                                                                                                                  gAAGCGCTCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTg                                                                                                                                                  <  2:1401010/150‑1 (MQ=255)    gcgcTCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTAGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTggcg                                                                                                                                               <  1:133220/150‑1 (MQ=255)     cgcTCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGATACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTggcgg                                                                                                                                              <  1:924599/150‑1 (MQ=255)        tcgtcgTCTTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCTCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCAGGCGGccg                                                                                                                                           <  1:14743/150‑2 (MQ=255)        tCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCAGGCGGccg                                                                                                                                           <  1:724630/150‑2 (MQ=255)           tGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCAggcg                                                                                                                                               >  2:664332/1‑143 (MQ=255)           tGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCAggcg                                                                                                                                               <  1:664332/143‑1 (MQ=255)              tATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGAGATATGCCCACCATCAGCCCGGCCGCCTGGCGGCCActgctg                                                                                                                                     >  1:1452442/1‑150 (MQ=255)                ttGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCa                                                                                                                                   <  1:796277/150‑1 (MQ=255)                   gcgcTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGcc                                                                                                                                >  1:634419/1‑150 (MQ=255)                   gcgcTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGcc                                                                                                                                >  1:634346/1‑150 (MQ=255)                      cTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTc                                                                                                                             <  1:617143/150‑1 (MQ=255)                         ttcttcGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTg                                                                                                                          <  2:1889935/150‑1 (MQ=255)                          tcttcGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTgg                                                                                                                         <  2:1276959/150‑1 (MQ=255)                            ttcGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGaa                                                                                                                       >  1:1646774/1‑150 (MQ=255)                            ttcGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGaa                                                                                                                       >  1:1223125/1‑150 (MQ=255)                              cGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGc                                                                                                                     >  1:419835/1‑150 (MQ=255)                                 tGTTCTGCATGGCGTGACACTGGCGCAAGCCATCGTCCCAGCCGGTTGCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCac                                                                                                                  >  2:28692/1‑149 (MQ=255)                                  gTTCTGCATGGCGTGACACTGGCGGAAGCCAGCTTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATc                                                                                                                 <  1:1151891/150‑1 (MQ=255)                                   ttCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATcc                                                                                                                >  1:991336/1‑150 (MQ=255)                                    tCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTATTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCg                                                                                                               <  2:976709/150‑1 (MQ=255)                                      tGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCa                                                                                                             >  1:535600/1‑150 (MQ=255)                                             cGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCag                                                                                                      <  2:1570449/150‑1 (MQ=255)                                              gTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCagg                                                                                                     >  2:426584/1‑150 (MQ=255)                                              gTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCAGCCGCATAGGCagg                                                                                                     >  1:696589/1‑150 (MQ=255)                                               tGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCa                                                                                                                                           >  2:162419/1‑111 (MQ=255)                                               tGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCa                                                                                                                                           <  1:162419/111‑1 (MQ=255)                                                gACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCCGACGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCaggag                                                                                                   <  2:1315354/150‑1 (MQ=255)                                                    cTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTa                                                                                               >  1:1829316/1‑150 (MQ=255)                                                    cTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTa                                                                                               >  2:1429281/1‑150 (MQ=255)                                                      ggCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAAc                                                                                             >  2:1214973/1‑150 (MQ=255)                                                          gAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTg                                                                                         >  2:1129041/1‑150 (MQ=255)                                                           aaGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTgg                                                                                        <  2:129526/150‑1 (MQ=255)                                                              ccATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCa                                                                                                                                   <  2:409808/104‑1 (MQ=255)                                                              ccATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCa                                                                                                                                   >  1:409808/1‑104 (MQ=255)                                                                aTCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGAc                                                                                   >  2:492465/1‑150 (MQ=255)                                                                aTCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGAc                                                                                   >  2:1498086/1‑150 (MQ=255)                                                                 tCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGAcc                                                                                  <  1:1661008/150‑1 (MQ=255)                                                                    taccAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATc                                                                               >  1:72899/3‑150 (MQ=255)                                                                     cccAGCCGGTTTCGTACTGACGCTCGTGCAGCTACCGCGGTACGTTATTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCt                                                                              <  2:991336/150‑1 (MQ=255)                                                                       cAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGc                                                                            >  2:1343866/1‑150 (MQ=255)                                                                             gTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCgtgg                                                                      <  1:956605/150‑1 (MQ=255)                                                                                tCGTACTGACGCTCGTGCAGGTAGAGAGACACGTACGGCCGAAATTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCgtgggtg                                                                   <  2:1646774/150‑1 (MQ=255)                                                                                  gTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCag                                                                                                      >  2:1802642/1‑113 (MQ=255)                                                                                  gTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCag                                                                                                      <  1:1802642/113‑1 (MQ=255)                                                                                     ctcaCGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTc                                                              <  1:1156001/147‑1 (MQ=255)                                                                                     cTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTc                                                              <  2:1861634/150‑1 (MQ=255)                                                                                      tGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTc                                                              >  1:1794039/1‑149 (MQ=255)                                                                                      tGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTc                                                              <  2:1794039/149‑1 (MQ=255)                                                                                        aCGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCa                                                           >  1:1084487/1‑150 (MQ=255)                                                                                         cGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCCGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATNGTCANGAGGGTAACCGTGGNTGACCATCTGCTCGTGGGTGGTTTCGCaa                                                          <  1:309044/150‑1 (MQ=255)                                                                                              gTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGa                                                     >  1:1198620/1‑150 (MQ=255)                                                                                               tGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGAc                                                    <  1:1495597/150‑1 (MQ=255)                                                                                                    gTAGCGCGGTACGTTCTTGCGGAAGTTGCCCAGCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGcaa                                               >  2:1069371/1‑150 (MQ=255)                                                                                                    gTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGcaa                                               >  2:1737416/1‑150 (MQ=255)                                                                                                    gTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGcaa                                               >  1:1098566/1‑150 (MQ=255)                                                                                                     tAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGcaac                                              >  1:826819/1‑150 (MQ=255)                                                                                                        cgcgGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCaacaac                                           <  1:964704/150‑1 (MQ=255)                                                                                                        cgcgGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCaacaac                                           <  1:1343866/150‑1 (MQ=255)                                                                                                         gcgGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACg                                          <  1:492465/150‑1 (MQ=255)                                                                                                            gTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCaa                                       <  1:1457023/150‑1 (MQ=255)                                                                                                            gTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCaa                                       <  2:167459/150‑1 (MQ=255)                                                                                                            gTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCaa                                       <  1:55561/150‑1 (MQ=255)                                                                                                             tACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGTCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAAt                                      >  2:1572033/1‑150 (MQ=255)                                                                                                                gTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGCCAGCAACAACGCAATGca                                   <  2:72899/150‑1 (MQ=255)                                                                                                                 ttCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCGCTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGcac                                  <  2:1364887/150‑1 (MQ=255)                                                                                                                         gAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGaa                          <  2:1829316/150‑1 (MQ=255)                                                                                                                            gTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGANCCa                       <  2:1198620/150‑1 (MQ=255)                                                                                                                            gTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCa                       <  1:216689/150‑1 (MQ=255)                                                                                                                             ttGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAg                      <  2:1735773/150‑1 (MQ=255)                                                                                                                                 ccaccaTCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTAcc                  >  1:354279/1‑150 (MQ=255)                                                                                                                                   accaTCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACcgc                >  2:765695/1‑150 (MQ=255)                                                                                                                                   accaTCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACcgc                >  1:1194000/1‑150 (MQ=255)                                                                                                                                       tCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACa            >  1:1495740/1‑150 (MQ=255)                                                                                                                                       tCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACACAATGCACACGCCGaa                          >  1:1071476/1‑136 (MQ=255)                                                                                                                                       tCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACACAATGCACACGCCGaa                          <  2:1071476/136‑1 (MQ=255)                                                                                                                                          gCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTc                                                                          >  2:1832792/1‑85 (MQ=255)                                                                                                                                          gCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTc                                                                          <  1:1832792/85‑1 (MQ=255)                                                                                                                                          gCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGtt                                                                <  1:1403434/95‑1 (MQ=255)                                                                                                                                          gCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGtt                                                                >  2:1403434/1‑95 (MQ=255)                                                                                                                                           cccGGCCGCCTGGCGGCCACTGCTGCAGTCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAGCTGGGGTTGACCACCTAATCGTGGGTGGTTTCGCACCCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGc        <  1:1572033/150‑1 (MQ=255)                                                                                                                                           cccGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAAGCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGc        <  2:535600/150‑1 (MQ=255)                                                                                                                                            gtggCCGCCAGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGcc       >  1:124053/3‑150 (MQ=255)                                                                                                                                            gtggCCGCCAGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGcc       >  2:73447/3‑150 (MQ=255)                                                                                                                                            ccGGCCGCCTGGCTACCACTGCTGCAGCCGACCTGGAAGCCATCCGCATAAGCACGAGGGTGACCGAGGTTGACCATCTGCTCGCGGCTGGTTTGGCATGAAAACATCAACAAGGCAATGCCCACGCCGAACCCGTACCACGAAATAGcc       >  2:51387/1‑150 (MQ=255)                                                                                                                                            ccGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGcc       >  2:1782211/1‑150 (MQ=255)                                                                                                                                                 cgccTGGCGGCCACTCCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGCCACaaa  <  1:1632649/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GAAGCGCTCGTGGTATTGGCGCTGTTCTTCGCTGTTCTGCATGGCGTGACACTGGCGGAAGCCATCGTCCCAGCCGGTTTCGTACTGACGCTCGTGCAGGTAGCGCGGTACGTTCTTGCGGAAGTTGCCCACCATCAGCCCGGCCGCCTGGCGGCCACTGCTGCAGCCGTCCTGGAAGCCATCCGCATAGGCAGGAGGGTAACCGTGGTTGACCATCTGCTCGTGGGTGGTTTCGCAACCCGACAGCAACAACGCAATGCACACGCCGAACCAGTACCGCGACATAGCCACAAA  >  NC_002947/790812‑791105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑