| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 132,471 | T→C | 5.9% | intergenic (+45/‑107) | cc → / → dsbA | cytochrome c4/thiol:disulfide interchange protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 132,471 | 0 | T | C | 5.9% | 231.2 / 2.4 | 78 | intergenic (+45/‑107) | cc/dsbA | cytochrome c4/thiol:disulfide interchange protein |
| Reads supporting (aligned to +/- strand): ref base T (33/40); new base C (2/3); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
AACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAGCGCTGCGCTGGTCGCCGCCAG > NC_002947/132322‑132618 | aaCCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCt > 2:272533/1‑150 (MQ=255) ccGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGc < 1:1608077/150‑1 (MQ=255) aCCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCAGCCCGGCCGCCCtt > 1:120767/1‑150 (MQ=255) ccAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCttt < 2:68191/150‑1 (MQ=255) cAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCtttt > 2:438640/1‑150 (MQ=255) aaCGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCAGCCCGGCCGCCCtttca < 2:120767/150‑3 (MQ=255) gATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCAGCCCGGCCGCCCtttcatca < 1:61069/150‑6 (MQ=255) cATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCg > 1:1248090/1‑150 (MQ=255) cATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCg > 1:227685/1‑150 (MQ=255) aTGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCtttt < 1:162868/134‑1 (MQ=255) aTGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCtttt > 2:162868/1‑134 (MQ=255) aTGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGt < 1:1308575/150‑1 (MQ=255) gACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTa < 2:816361/150‑1 (MQ=255) ccaagagcACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTaca > 2:71816/7‑150 (MQ=255) ccctCGCTGGCAAGCTGAGCCAACATGAAATCGAAGCGTGGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTACGTCCGCAGCCGTTACACTACAGAAc < 2:957923/147‑1 (MQ=255) aTCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTc < 1:71816/150‑1 (MQ=255) cGCTGGCAAGCTGAGCACCCATGACATCGCAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGGTACACTACAGAACTCGa < 2:522927/150‑1 (MQ=255) cGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGa < 2:845720/150‑1 (MQ=255) cGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGG‑CAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAg < 2:126603/150‑1 (MQ=255) gCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTtccgtcc > 2:1657312/1‑124 (MQ=255) gCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTtccgtcc < 1:1657312/124‑1 (MQ=255) gCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGGTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTccc > 1:551830/1‑150 (MQ=255) aGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGc < 1:186106/139‑1 (MQ=255) aGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGc > 2:186106/1‑139 (MQ=255) aGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGcc < 2:1248090/150‑1 (MQ=255) tcAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCt < 2:759188/149‑1 (MQ=255) gCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTGAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCt < 1:498446/150‑1 (MQ=255) cAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTg > 1:20338/1‑150 (MQ=255) ccATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTAAGGAGCCGTTACACTACAGAACTCGAGCCGTTCCCGGCCTGtct > 1:871388/1‑150 (MQ=255) cATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGtctc > 2:350901/1‑150 (MQ=255) tGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAg > 1:1072168/1‑150 (MQ=255) gACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGt > 2:1497193/1‑150 (MQ=255) cGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAgg < 1:1899346/150‑1 (MQ=255) aaGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTTCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTc > 2:731600/1‑150 (MQ=255) gTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGcgt < 1:438640/150‑1 (MQ=255) ggCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGcgtcgt > 2:1766910/1‑150 (MQ=255) gCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTg < 2:1072168/150‑1 (MQ=255) gCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTg < 1:203318/150‑1 (MQ=255) gCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTg < 1:1824946/150‑1 (MQ=255) ccAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTgg < 2:1600233/150‑1 (MQ=255) cAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGc > 2:1088299/1‑150 (MQ=255) aGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTg > 2:684040/1‑133 (MQ=255) aGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTg < 1:684040/133‑1 (MQ=255) gCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGa < 1:1322616/150‑1 (MQ=255) cTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGAc > 1:256970/1‑150 (MQ=255) cTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGAc < 2:227685/150‑1 (MQ=255) aTCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTa > 1:945957/1‑94 (MQ=255) aTCCAGGGCCTGCATTAACTGTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTGTTCCGTCCGCAGCCGTTACACTa < 2:945957/94‑1 (MQ=255) tCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGt < 1:837532/119‑1 (MQ=255) tCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGt > 2:837532/1‑119 (MQ=255) ccAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGa < 2:335066/150‑1 (MQ=255) ccAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGa < 1:1088299/150‑1 (MQ=255) ccAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGa < 1:131620/150‑1 (MQ=255) cTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCa < 2:187867/150‑1 (MQ=255) cATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGa < 2:696824/150‑1 (MQ=255) ttAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGt > 2:175679/1‑150 (MQ=255) tttCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGc > 1:613104/1‑150 (MQ=255) ttCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCAGTTAAACTACAGAACTCGAGCCCTTCCCGGCATGTGTCAGTGCAGGTCGCGTCCTGGCGACCCATGACTGCTCAGGAGTAAAGCa > 2:815781/1‑150 (MQ=255) ggTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGCCGACCCCTGACCGCCCAGGAGTAAAGCACGc > 2:1570292/1‑150 (MQ=255) gTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCg > 1:506463/1‑150 (MQ=255) ttgtAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGc > 2:1403663/1‑142 (MQ=255) ttgtAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGc < 1:1403663/142‑1 (MQ=255) ttgtAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCAGGCGTCAACtt > 1:87786/1‑149 (MQ=255) tagcacAATGATGAAAGTGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACGACAGAACTCGAGCCCTCCCCGGCCTGTCTCAGTGCAGGTCGCGNCGTGGCGACNCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGAtt < 1:90228/145‑1 (MQ=255) ggTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATtct < 1:1766910/150‑1 (MQ=255) gTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATtctc > 2:674199/1‑150 (MQ=255) cAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAg < 1:175679/150‑1 (MQ=255) aaTGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGa < 1:685470/112‑1 (MQ=255) aaTGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGa > 2:685470/1‑112 (MQ=255) gatgaAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAgcgct > 2:564184/1‑150 (MQ=255) atgaAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAgcgctg > 2:1331814/1‑150 (MQ=255) gaAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAg > 2:1022837/1‑122 (MQ=255) gaAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAg < 1:1022837/122‑1 (MQ=255) aaaaGGGCAGCCCGGCCGCCCTTTTTTCCGTCCGCAGCCGTTACCCTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTCAAGCATGCGTAAACTGAtt > 1:564817/2‑138 (MQ=255) aaaaGGGCAGCCCGGCCGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGAtt < 2:564817/137‑1 (MQ=255) aaaGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAgcgctgcgc < 1:306628/150‑1 (MQ=255) ggcCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAGCGCTGCGCTGGTcgc < 1:350901/150‑1 (MQ=255) ccGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCCTGACTGCTCCGGAGTCAAGCATGCGGAACCTGGTTCTCAGCGCTGCTCTGGTcgccg < 2:20338/150‑1 (MQ=255) gCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAGCGCTGCGCTGGTCGCCGCCAg > 2:1586180/1‑150 (MQ=255) | AACCGCACCAACGATGGCGATGCCATGACCATGCGCACCATCGCTGGCAAGCTGAGCAACCATGACATCGAAGCGTTGGCCAGCTACATCCAGGGCCTGCATTAACTTTCGGTTAATGTTGTAGGTCAATGATGAAAGGGCGGCCGGGCTGCCCTTTTTTCCGTCCGCAGCCGTTACACTACAGAACTCGAGCCCTTCCCGGCCTGTCTCAGTGCAGGTCGCGTCGTGGCGACCCATGACTGCTCAGGAGTAAAGCATGCGTAAACTGATTCTCAGCGCTGCGCTGGTCGCCGCCAG > NC_002947/132322‑132618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |