Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,062,133 T→C 6.4% A90A (GCT→GCC)  PP_0919 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,062,1330TC 6.4% 261.8 / 5.0 93A90A (GCT→GCC) PP_0919hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (36/49);  new base C (3/3);  total (40/53)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01

GCACGGCGCCGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTGGAGCAGGTGCT  >  NC_002947/1061988‑1062282
                                                                                                                                                 |                                                                                                                                                     
gCACGGCGCCGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATATCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGgcc                                                                                                                                                   >  1:876608/1‑150 (MQ=255)
  aCGGCGCCGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGgccgc                                                                                                                                                 <  2:1629392/150‑1 (MQ=255)
     atctcGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCCAGCCGCCtc                                                                                                                                              <  1:1258480/146‑2 (MQ=255)
      cgcCGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCCAGCCGCCtct                                                                                                                                             <  1:1830207/150‑3 (MQ=255)
        ccGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAg                                                                                                                                           <  1:1908726/150‑1 (MQ=255)
         cGTTGTGGGCATTGATCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAgg                                                                                                                                          <  2:409666/150‑1 (MQ=255)
          gTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCAGCAGGGGAGAGGCGGCCAgccgccgctagat                                                                                                                                         >  2:1258480/1‑143 (MQ=255)
           ttGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCa                                                                                                                                        >  2:1218761/1‑150 (MQ=255)
            tgtgGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCaa                                                                                                                                       <  1:725368/150‑1 (MQ=255)
                 gCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGGGGGCCGCCTTCAGGCAATCAGt                                                                                                                                  >  2:1883679/1‑150 (MQ=255)
                  cATTGCTCGGTGCCTCGTTCATCGCCTTGGCCCGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGGCCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTg                                                                                                                                 <  1:196240/150‑1 (MQ=255)
                   aTTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTgg                                                                                                                                <  1:1481063/150‑1 (MQ=255)
                   aTTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTgg                                                                                                                                >  2:1481063/1‑150 (MQ=255)
                     tGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCa                                                                                                                              >  1:803010/1‑150 (MQ=255)
                      gCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTGCAGGCAATTAGTGGCaa                                                                                                                             <  2:777201/150‑1 (MQ=255)
                       cTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAg                                                                                                                            <  1:1752837/150‑1 (MQ=255)
                         cGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGt                                                                                                                          <  1:1480695/150‑1 (MQ=255)
                            tGCCTCGTGCATCGCCTTGGCGGGGCTGGGCTGGGGGAGCTTCCAGCAGATCTCGCTGATTGAGCAGCAACTGGTGGTGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCGTCAGGCAATCAGTGGCAAGGTggc                                                                                                                       <  1:879349/150‑1 (MQ=255)
                             gCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTggcg                                                                                                                      <  1:359360/150‑1 (MQ=255)
                             gCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTggcg                                                                                                                      <  2:1901888/150‑1 (MQ=255)
                                tCGTTCATCGCCTTTGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGGGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTggcggac                                                                                                                   >  1:223052/1‑148 (MQ=255)
                                tCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGcc                                                                                                                   >  1:1683329/1‑150 (MQ=255)
                                   ttCATCGCCTTGGCGGGGCTGGGCTGGTGGCGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCCGTGGAAAGGGGGGGGCGAGt                                                                                                                <  2:1019838/150‑1 (MQ=255)
                                   ttCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGt                                                                                                                >  1:531397/1‑150 (MQ=255)
                                   ttCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGt                                                                                                                >  1:1051691/1‑150 (MQ=255)
                                   ttCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGt                                                                                                                <  2:1310345/150‑1 (MQ=255)
                                     cATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGa                                                                                                              <  1:1611658/150‑1 (MQ=255)
                                     cATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGa                                                                                                              >  2:83616/1‑150 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAg                                                                                                                                           >  2:318921/1‑119 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAg                                                                                                                                           <  1:318921/119‑1 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGt                                                                                                            >  1:1738078/1‑150 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGt                                                                                                            >  1:92562/1‑150 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGt                                                                                                            <  2:803010/150‑1 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCCTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCa                                                                                                                                    <  1:618765/126‑1 (MQ=255)
                                       tCGCCTTGGCGGGGCTGGGCTGGTGGAGCCTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCa                                                                                                                                    >  2:618765/1‑126 (MQ=255)
                                          ccTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTg                                                                                                         <  2:202970/150‑1 (MQ=255)
                                          ccTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTg                                                                                                         <  2:427404/150‑1 (MQ=255)
                                           cTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCACTGATGGAGCCGCAACGGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCCCGTTGTCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTgg                                                                                                        <  1:1789250/150‑1 (MQ=255)
                                               gCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGcc                                                                                                    <  2:160568/150‑1 (MQ=255)
                                                         gctggTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACcagca                                                                                          >  2:1504626/1‑150 (MQ=255)
                                                             gtggAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGa                                                                                      >  2:440850/1‑150 (MQ=255)
                                                              tggAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAg                                                                                     <  2:489815/150‑1 (MQ=255)
                                                              tggAGCTTCCAGCAGACGCCGTGGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTCTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAg                                                                                     <  1:97970/150‑1 (MQ=255)
                                                                   cTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGGCCGCGTAAAATATGAATCGGCTGGCCGCCGTCGGTCAATCGGGGGCAAGGTGGCGGCCAGTGAGTCTGAAGAGAGAGCCAGCAGTGAGGCAtt                                                                                >  1:1039408/1‑150 (MQ=255)
                                                                      ccAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGTGCCACTACCAGCAGTGAGGCATTGaa                                                                             <  1:1297548/150‑1 (MQ=255)
                                                                      ccAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGaa                                                                             <  1:1394874/150‑1 (MQ=255)
                                                                       cagcagATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAg                                                                            >  2:1704270/1‑150 (MQ=255)
                                                                               ctcGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCt                                                                    <  2:256163/150‑1 (MQ=255)
                                                                                tcGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTg                                                                   >  2:946125/1‑150 (MQ=255)
                                                                                tcGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTg                                                                   <  2:158068/150‑1 (MQ=255)
                                                                                 cGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTgc                                                                  <  2:1683329/150‑1 (MQ=255)
                                                                                   cTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTgcgc                                                                <  1:701880/150‑1 (MQ=255)
                                                                                     gATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAg                                                                      >  2:725630/1‑142 (MQ=255)
                                                                                     gATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAg                                                                      <  1:725630/142‑1 (MQ=255)
                                                                                         gAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTACCCGAACCAGAGAAATGCCGAATTGCCGCCTTCAGTTAAGCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTg                                                          >  1:36602/1‑150 (MQ=255)
                                                                                          agcagcAAGTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGCCTGGCCGCCTTCATGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTgc                                                         <  2:1039408/150‑1 (MQ=255)
                                                                                              gcaACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTgcagca                                                     >  2:1104728/1‑150 (MQ=255)
                                                                                              gcaACTGGTGGCGACCCAGGAAAGCTATTGCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTgcagca                                                     >  1:1203607/1‑150 (MQ=255)
                                                                                               caACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGcagcag                                                    <  1:155420/150‑1 (MQ=255)
                                                                                               caACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGcagcag                                                    >  2:1745739/1‑150 (MQ=255)
                                                                                                aaCTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAgg                                                   <  2:92562/150‑1 (MQ=255)
                                                                                                  cTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGa                                                 <  1:1829202/150‑1 (MQ=255)
                                                                                                   tggtggCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAg                                                                            <  1:211774/122‑1 (MQ=255)
                                                                                                   tggtggCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAg                                                                            >  2:211774/1‑122 (MQ=255)
                                                                                                   tggtggCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGa                                                 <  1:1711713/149‑1 (MQ=255)
                                                                                                   tggtggCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGa                                                 >  2:1711713/1‑149 (MQ=255)
                                                                                                     gtggCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGtt                                              >  2:444751/1‑150 (MQ=255)
                                                                                                           aCCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCCGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCggg                                        <  2:1051691/150‑1 (MQ=255)
                                                                                                             ccAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTgca                                                        <  1:1459443/132‑1 (MQ=255)
                                                                                                             ccAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTgca                                                        >  2:1459443/1‑132 (MQ=255)
                                                                                                             ccAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCa                                      >  2:379642/1‑150 (MQ=255)
                                                                                                             ccAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCa                                      >  2:379635/1‑150 (MQ=255)
                                                                                                             ccAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCa                                      >  1:1132869/1‑150 (MQ=255)
                                                                                                              cAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAg                                     >  2:1015746/1‑150 (MQ=255)
                                                                                                               aGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGa                                    <  1:1308065/150‑1 (MQ=255)
                                                                                                                    aGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCTGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTATGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGc                               <  2:983296/150‑1 (MQ=255)
                                                                                                                       tttGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGACTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGAc                            >  1:518015/1‑150 (MQ=255)
                                                                                                                           cccGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTgg                        <  1:1104728/150‑1 (MQ=255)
                                                                                                                           cccGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTgg                        <  1:1691853/150‑1 (MQ=255)
                                                                                                                            ccGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTCAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACAGGCGACCTggg                       >  1:216635/1‑150 (MQ=255)
                                                                                                                               cATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCaa                    <  1:1218761/150‑1 (MQ=255)
                                                                                                                                   aGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTgg                        >  2:1480140/1‑142 (MQ=255)
                                                                                                                                   aGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTgg                        <  1:1480140/142‑1 (MQ=255)
                                                                                                                                    gTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGTGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTc               <  1:1504626/150‑1 (MQ=255)
                                                                                                                                     tGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTTGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCt              <  1:1565740/150‑1 (MQ=255)
                                                                                                                                     tGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCt              >  2:1786435/1‑150 (MQ=255)
                                                                                                                                     tGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCt              >  1:1785661/1‑150 (MQ=255)
                                                                                                                                     tGAAGAGGCGGCGGGCCGCCTTCAGGCAAGCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCCTTGAAGCTACAGCTGCGCCAGTTGAAGCAGGGCGTTGCGGGGCCGACCGTAGACCTGTGCAGGCTTCt              <  2:223052/150‑1 (MQ=255)
                                                                                                                                      ctgaagGCGGCCAGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAgg                                                   <  2:1064156/108‑1 (MQ=255)
                                                                                                                                      ctgaagGCGGCCAGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAgg                                                   >  1:1064156/5‑112 (MQ=255)
                                                                                                                                      ctgaagGCGGCCAGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTg             >  2:654363/5‑150 (MQ=255)
                                                                                                                                        agagGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTGGa           <  2:1785661/150‑1 (MQ=255)
                                                                                                                                            gcggcTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTGGAGCAg       <  1:946125/150‑1 (MQ=255)
                                                                                                                                                 tGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTGGAGCAGGTgct  <  1:83616/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GCACGGCGCCGTTGTGGGCATTGCTCGGTGCCTCGTTCATCGCCTTGGCGGGGCTGGGCTGGTGGAGCTTCCAGCAGATCTCGCTGATGGAGCAGCAACTGGTGGCGACCCAGGAAAGCTTTGCCCGCATCAGTGAAGAGGCGGCTGGCCGCCTTCAGGCAATCAGTGGCAAGGTGGCGGCCAGTGAGTCTGGCGCCACTACCAGCAGTGAGGCATTGAAGCTACAGCTGCGCCAGTTGCAGCAGGGAGTTGCCGGGCAGACCGGCGACCTGGGCAAGCGTCTGGAGCAGGTGCT  >  NC_002947/1061988‑1062282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑