Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,193,934 T→A 8.4% L23M (TTG→ATG) ‡ uxpA → lipoprotein UxpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,193,9340TA 8.4% 235.4 / 11.4 83L23M (TTG→ATG) ‡uxpAlipoprotein UxpA
Reads supporting (aligned to +/- strand):  ref base T (47/29);  new base A (4/3);  total (51/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.21e-01

TTGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAC  >  NC_002947/1193786‑1194083
                                                                                                                                                     |                                                                                                                                                     
ttGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCtt                                                                                                                                                      <  2:481839/150‑1 (MQ=255)
         cTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCgct                                                                                                                                             <  2:1899876/150‑1 (MQ=255)
          tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGACGCTG‑GATCGGCTGGATGGGTATCGGTGCCTTGGCACCgctg                                                                                                                                            >  1:17892/1‑150 (MQ=255)
          tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCgctg                                                                                                                                            >  1:827382/1‑150 (MQ=255)
          tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTAGCGGTGCCTTGGCACCgctg                                                                                                                                            >  2:957583/1‑150 (MQ=255)
            tCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCgctgct                                                                                                                                          >  2:1623966/1‑150 (MQ=255)
               gATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCgg                                                                                                                                       >  1:261852/1‑150 (MQ=255)
                     tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTg                                                                                                                                 >  2:1726568/1‑150 (MQ=255)
                     tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTg                                                                                                                                 >  1:1317202/1‑150 (MQ=255)
                       ccATCAAACTGTAATGCCAAGGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGca                                                                                                                               <  2:848923/150‑1 (MQ=255)
                       ccATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACTGCTGCTCGGCGCCTGca                                                                                                                               <  1:726993/150‑1 (MQ=255)
                       ccATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGca                                                                                                                               >  2:1758681/1‑150 (MQ=255)
                        cATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGCTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            >  2:1186131/1‑133 (MQ=255)
                        cATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGCTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            <  1:1186131/136‑4 (MQ=255)
                           cAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGc                                                                                                                           >  2:1694256/1‑150 (MQ=255)
                             aaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCt                                                                                                                         >  2:1804561/1‑150 (MQ=255)
                             aaCTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCt                                                                                                                         >  2:350458/1‑150 (MQ=255)
                                cgTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGAGCAGATGGTGTGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTcc                                                                                                                      >  2:1791169/2‑150 (MQ=255)
                                   aaTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAg                                                                                                                   <  1:1388705/150‑1 (MQ=255)
                                    aTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAgg                                                                                                                  <  1:1807797/150‑1 (MQ=255)
                                       ccAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGgca                                                                                                               <  1:1581091/150‑1 (MQ=255)
                                              cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGggc                                                                                                        <  1:1798663/150‑1 (MQ=255)
                                              cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            <  2:349819/114‑4 (MQ=255)
                                              cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCACCgata                                                                                                                                            >  1:349819/1‑111 (MQ=255)
                                                    aTCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                  >  1:1719125/1‑150 (MQ=255)
                                                     tCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCAcc                                                                                                                                                >  1:577081/1‑103 (MQ=255)
                                                     tCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCAAGGCAcc                                                                                                                                                <  2:577081/103‑1 (MQ=255)
                                                        gggTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCGCGGCTGCGCGGCGCCTGCACAGCCTTCCAAGGTGAGCAGGGCGGCAATGccc                                                                                              >  1:1531873/1‑150 (MQ=255)
                                                         ggTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCa                                                                                             <  1:69692/150‑1 (MQ=255)
                                                             ccTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTc                                                                                         >  1:1611942/1‑150 (MQ=255)
                                                              cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGgc                                                                                                                                      <  1:1415151/104‑1 (MQ=255)
                                                              cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGgc                                                                                                                                      >  2:1415151/1‑104 (MQ=255)
                                                              cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  2:1008380/1‑150 (MQ=255)
                                                                gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAc                                                                                      >  1:847057/1‑150 (MQ=255)
                                                                    ggACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGc                                                                                  <  1:305954/150‑1 (MQ=255)
                                                                      aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTg                                                                                >  1:845221/1‑150 (MQ=255)
                                                                      aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTg                                                                                <  2:1317202/150‑1 (MQ=255)
                                                                      aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTg                                                                                <  2:1723697/150‑1 (MQ=255)
                                                                         tGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGACATCCCCACCCCCCCTTCCTGTAc                                                                             >  2:9127/1‑150 (MQ=255)
                                                                           gtacacgATGGCGGTCTCTATCGCTAGTAGGGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGt                                                                           >  2:223198/7‑150 (MQ=255)
                                                                            ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGt                                                                               >  1:57971/1‑145 (MQ=255)
                                                                            ttAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGGATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGt                                                                               <  2:57971/145‑1 (MQ=255)
                                                                             tAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCg                                                                         <  2:261852/150‑1 (MQ=255)
                                                                                    ggCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATAc                                                                  <  1:875827/150‑1 (MQ=255)
                                                                                       ggATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCAATACCCt                                                               <  2:31181/150‑1 (MQ=255)
                                                                                        gATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTc                                                              <  2:1719125/150‑1 (MQ=255)
                                                                                          tGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGa                                                            <  2:847057/150‑1 (MQ=255)
                                                                                           gCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGACAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGAt                                                           <  1:1694256/150‑1 (MQ=255)
                                                                                           gCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGAGCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGAAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGAt                                                           <  1:9127/150‑1 (MQ=255)
                                                                                               tGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGccc                                                       >  2:981625/1‑150 (MQ=255)
                                                                                                 gCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATTCGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGc                                                     <  1:1040705/150‑1 (MQ=255)
                                                                                                   gAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                   >  2:132873/1‑150 (MQ=255)
                                                                                                        gtgtGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                              <  1:1623966/150‑1 (MQ=255)
                                                                                                         tgtgCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTACGAACGATAATTGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTgg                                             >  2:927948/1‑150 (MQ=255)
                                                                                                          gtgCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCCCGACCTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGc                                            <  2:1809481/150‑1 (MQ=255)
                                                                                                            gCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGACGATAACATCGACGCGCGCCAGCCGCGCCa                                          >  2:108156/1‑150 (MQ=255)
                                                                                                               caGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGc                                       <  1:132873/150‑1 (MQ=255)
                                                                                                                       gAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTa                                >  2:494305/1‑150 (MQ=255)
                                                                                                                           tgctCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCgg                            >  2:1423148/4‑150 (MQ=255)
                                                                                                                              tCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGa                                                                     <  1:547273/106‑1 (MQ=255)
                                                                                                                              tCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGa                                                                     >  2:547273/1‑106 (MQ=255)
                                                                                                                              tCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTa                         >  1:73894/1‑150 (MQ=255)
                                                                                                                                 gCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTAccc                      >  1:827134/1‑150 (MQ=255)
                                                                                                                                     gATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                  >  2:126467/1‑150 (MQ=255)
                                                                                                                                     gATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                  >  1:1115415/1‑150 (MQ=255)
                                                                                                                                      aTGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTg                 >  1:1044414/1‑150 (MQ=255)
                                                                                                                                      aTGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTg                 >  1:719286/1‑150 (MQ=255)
                                                                                                                                       tGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTGCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgg                <  1:108156/150‑1 (MQ=255)
                                                                                                                                        gggTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTggg               >  1:1387543/1‑150 (MQ=255)
                                                                                                                                         agcagcGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTgggg              >  1:1812777/6‑150 (MQ=255)
                                                                                                                                          gTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCGTCCCAGGGCAGTAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACACTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc             >  1:240077/1‑150 (MQ=255)
                                                                                                                                            agcGGTGCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCg           >  2:1619382/3‑150 (MQ=255)
                                                                                                                                            aTCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCg           >  1:787453/1‑150 (MQ=255)
                                                                                                                                             tCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCt                                                               >  2:1160391/1‑97 (MQ=255)
                                                                                                                                             tCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCt                                                               <  1:1160391/97‑1 (MQ=255)
                                                                                                                                              cGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGt         <  1:1758681/150‑1 (MQ=255)
                                                                                                                                               ggTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTc        >  1:1246636/1‑150 (MQ=255)
                                                                                                                                                gTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGTCATGCCCAGCTCGCATTGATACACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGATTGGGGCCGGTCa       >  1:1176840/1‑150 (MQ=255)
                                                                                                                                                gTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       >  2:1662462/1‑150 (MQ=255)
                                                                                                                                                gTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       >  1:1267997/1‑150 (MQ=255)
                                                                                                                                                gTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       >  2:1890563/1‑150 (MQ=255)
                                                                                                                                                  gCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGc     >  1:1754789/1‑150 (MQ=255)
                                                                                                                                                  gCCTTGGCAACGCTGCTAGGCACATGCTCAGCCCTACCATGTCAGTAGGTGTTCAATGCCCAGCTCGACTTGCTGAACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGc     <  2:17892/150‑1 (MQ=255)
                                                                                                                                                   ccTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGcc    >  2:480463/1‑150 (MQ=255)
                                                                                                                                                     ttGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAc  >  1:30741/1‑150 (MQ=255)
                                                                                                                                                     ttGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGAGGCAATGCCCAGCTCGACTTGATGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAc  >  2:981644/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTGGAATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCG‑CGAAGTGATCGGCTGGATGGGTATCGGTGCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAC  >  NC_002947/1193786‑1194083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑