| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,229,553 | G→C | 5.2% | Q909H (CAG→CAC) | PP_1072 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,229,553 | 0 | G | C | 5.2% | 295.4 / 6.3 | 96 | Q909H (CAG→CAC) | PP_1072 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (40/51); new base C (3/2); total (43/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
GCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGC > NC_002947/1229406‑1229698 | gCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGCGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTg > 2:41028/1‑150 (MQ=255)gCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTg < 2:1727572/150‑1 (MQ=255)gCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTg < 2:1821981/150‑1 (MQ=255) gTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTCCACCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGgc < 1:1080001/150‑1 (MQ=255) tATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAg < 2:1100163/150‑1 (MQ=255) tATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAg < 2:159873/150‑1 (MQ=255) aTTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGCGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg < 2:1228727/150‑1 (MQ=255) ttCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAggg > 1:983883/1‑150 (MQ=255) aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATg > 1:1160327/1‑150 (MQ=255) aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAACTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATg > 2:844259/1‑150 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGAGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGACGCAGGGATGc > 1:825114/1‑150 (MQ=255) ccAAGTGTTTCAGACGATGACAGACGGGGATGGACAAGCCTATCTGCTTGCACTCATGGGGTGATGATCCTCTTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc < 1:1468836/150‑1 (MQ=255) cAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGcc > 1:1314114/1‑150 (MQ=255) aGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAg < 1:403956/150‑1 (MQ=255) gacgaTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACt < 2:1776629/150‑1 (MQ=255) gacgaTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACt < 2:1456817/150‑1 (MQ=255) aTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGAc < 1:102283/150‑1 (MQ=255) gACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGc < 2:1512898/150‑1 (MQ=255) cAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCtt < 1:1824188/150‑1 (MQ=255) aGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCttt > 2:1045589/1‑150 (MQ=255) ccGGTGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTATGGTTGTGGGAGCACTACAGCCAGCTGACGGTGCATTTGGCGCGCCTGCGTCAGAGCTTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAc < 1:370477/149‑1 (MQ=255) ggggAGCTACAAGCCTATCTGATTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcgc > 1:1154869/1‑150 (MQ=255) ggAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcgccg < 1:844259/150‑1 (MQ=255) aGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACgccgcc > 1:1339859/1‑150 (MQ=255) cTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg < 2:98817/114‑1 (MQ=255) cTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg > 1:98817/1‑114 (MQ=255) cTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTATGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGt > 1:1914629/1‑150 (MQ=255) aCAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGAAGTTGGCGTGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCg > 2:153327/1‑150 (MQ=255) aCAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGGAGGGTTGTGGGAGCACTACAGCCAGCTGCCGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCAAGTAACCCAATATAGGCTTTACGCCGCCGTCg > 1:97937/1‑150 (MQ=255) cAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGGGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGAGGCGCAGGAGTGCCAGTACCCCACTGGACGCTTTACGCCGCCGCCgg > 2:725714/1‑150 (MQ=255) gCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg < 2:791067/108‑1 (MQ=255) gCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg > 1:791067/1‑108 (MQ=255) gCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCtt < 2:1303073/133‑1 (MQ=255) gCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCtt > 1:1303073/1‑133 (MQ=255) aTCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTa > 1:462560/1‑150 (MQ=255) tCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg > 2:122807/1‑103 (MQ=255) tCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg < 1:122807/103‑1 (MQ=255) gCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGc > 1:1047183/1‑150 (MQ=255) cTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAcc < 2:1593626/112‑1 (MQ=255) cTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAcc > 1:1593626/1‑112 (MQ=255) gACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTgg > 1:1774548/1‑90 (MQ=255) gACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTgg < 2:1774548/90‑1 (MQ=255) gACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGTGTCGCTACTGCCGTa > 2:1048610/1‑150 (MQ=255) aCCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTAc > 1:1686004/1‑150 (MQ=255) aCCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTAc > 1:152834/1‑150 (MQ=255) ccTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACg < 1:298137/150‑1 (MQ=255) cTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTaa > 2:59816/1‑104 (MQ=255) cTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTaa < 1:59816/104‑1 (MQ=255) cTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACgg < 2:1339859/150‑1 (MQ=255) cggcgAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCTAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTgg < 2:1314114/150‑1 (MQ=255) ggtgAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGTGTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggc < 1:1366599/147‑1 (MQ=255) ggtgAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGAGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggc < 1:1366404/147‑1 (MQ=255) gAGTAGGGTGGGGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggcggc < 2:596808/150‑1 (MQ=255) tAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGTGAAGCTGGCGGCGCa > 2:1383654/1‑150 (MQ=255) tAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGAAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGATACTGCCGTACGGCGAAGGTGGCGGCGCa > 1:33561/1‑150 (MQ=255) aGGGTTGGGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTGTACGCCGCCGTCGGGTCTCTACTGCCGTAAGGCGAAGCTgccggctcta < 2:842422/150‑5 (MQ=255) gggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAg < 2:701615/150‑1 (MQ=255) ggTTGTGGGAGCACTACAGCCAGCTGACGGGGTAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACTGCGAAGCTGGCGGCGCAAGa > 1:794616/1‑150 (MQ=255) ggTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGa < 2:578551/150‑1 (MQ=255) tgtgGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATaa < 2:1648503/150‑1 (MQ=255) tgtgGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATaa < 1:1124001/150‑1 (MQ=255) gggAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGAGTCGCTACTGCCGTACGGCGAAGCTgg > 1:1785840/1‑134 (MQ=255) gggAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGAGTCGCTACTGCCGTACGGCGAAGCTgg < 2:1785840/134‑1 (MQ=255) ggAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACcga > 2:1715483/1‑150 (MQ=255) gggaaCTACAGCCAGCTGTCGGGGCAGTTGGCGCGCCTGCGTCAGAGCATGCGCCAGTGGCGCAGGGATGCCAGGAACCCACGGGACGCTTTAGGCCGGCGGCGAGACCCGACTGCCTTACGGCGTAGCTGGCGACGCAAGATAACcggc < 2:825114/146‑3 (MQ=255) aGCACTACAGCCAGCTGACGGGGCAGTTGCCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCCGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGACGCTGGCGGCGCAAGATAACcgacg > 2:758331/1‑150 (MQ=255) gCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACcgacga < 1:963799/150‑1 (MQ=255) cTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGc > 1:1660508/1‑150 (MQ=255) tACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGATCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGGCGGGTCGCTACTGACCTATATCGAAGCTGGCGGCGCAAGATAACCGACGAGGcc > 2:1096076/1‑150 (MQ=255) aCAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCg < 2:580233/150‑1 (MQ=255) aCAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCg < 2:152834/150‑1 (MQ=255) agccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCggg < 2:1809900/150‑1 (MQ=255) ccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGa > 2:1661205/1‑150 (MQ=255) gggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAg < 1:1216169/107‑1 (MQ=255) gggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAg > 2:1216169/1‑107 (MQ=255) gggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTg < 2:293381/150‑1 (MQ=255) cAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatc < 1:1920446/150‑1 (MQ=255) aGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTCCGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatca < 1:41028/150‑1 (MQ=255) gTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGatcat < 2:1914629/150‑1 (MQ=255) ggCGCGCCTTCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAg < 2:1046669/150‑1 (MQ=255) gcgcgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGc < 1:809044/150‑1 (MQ=255) cgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACTGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGga < 2:794616/150‑1 (MQ=255) cTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGagag > 2:1526324/1‑150 (MQ=255) tGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGc < 1:1661205/150‑1 (MQ=255) tGCGTCAGAGCCTGCGCAAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACTAGTCCGGGGACTACGCGCTGATCATCAGCGGAGAGc < 1:779994/150‑1 (MQ=255) atcccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCgg > 2:342092/4‑150 (MQ=255) gCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGa < 2:462560/150‑1 (MQ=255) ccTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg < 1:956383/150‑1 (MQ=255) ccTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg > 2:848831/1‑150 (MQ=255) ccTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg > 2:956383/1‑150 (MQ=255) ccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg > 1:1665810/1‑150 (MQ=255) tGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTc > 1:1363479/1‑150 (MQ=255) gcCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGc > 1:1426107/1‑150 (MQ=255) gcCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGGCTGc > 1:148499/1‑150 (MQ=255) gcCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGCACGTTCTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGc < 1:20215/150‑1 (MQ=255) gcCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCAGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGc < 2:1160327/150‑1 (MQ=255) | GCGTGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACTACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGC > NC_002947/1229406‑1229698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |