| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,269,395 | C→G | 7.8% | D15H (GAT→CAT) | PP_1109 ← | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,269,395 | 0 | C | G | 7.8% | 316.5 / 15.2 | 102 | D15H (GAT→CAT) | PP_1109 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (46/48); new base G (4/4); total (50/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GAAGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGAA > NC_002947/1269246‑1269542 | gAANTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATc > 2:1188859/1‑150 (MQ=255) tCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagt < 2:1467519/150‑4 (MQ=255) tCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagt < 2:1879523/150‑4 (MQ=255) tCGCCCGGGTGATGCCGTCAACACACCTTCGATGAACAGAAAGGTATCGCCTGACACGACGTCGTGGTATCGGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCTCGGGCAACCACTCGCCTGCATCCAGGCgttg > 1:1280291/1‑150 (MQ=255) gCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAGGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCGTGCGTGGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgtt > 2:721775/1‑150 (MQ=255) cccGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGttt > 2:859612/1‑150 (MQ=255) gTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCaaaa < 2:483452/150‑1 (MQ=255) aTGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgag > 1:1693293/1‑136 (MQ=255) aTGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgag < 2:1693293/138‑3 (MQ=255) gCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtga < 1:1188859/150‑1 (MQ=255) ccGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagtg < 1:1018528/137‑5 (MQ=255) ccGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagtg > 2:1018528/1‑133 (MQ=255) gTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtgatga > 1:1331727/1‑150 (MQ=255) cAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAg < 2:1182803/150‑1 (MQ=255) aaCACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAgg < 2:1373575/150‑1 (MQ=255) acacCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCaaaa > 2:485772/1‑136 (MQ=255) acacCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTg > 2:539628/1‑150 (MQ=255) ccTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAg < 2:676934/150‑1 (MQ=255) cTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg < 2:1713542/150‑1 (MQ=255) cTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg < 1:283024/150‑1 (MQ=255) cTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCACCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg > 1:490283/1‑150 (MQ=255) ttCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAggg > 1:285963/1‑150 (MQ=255) cGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGa < 1:812923/150‑1 (MQ=255) cGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGa < 2:1331727/150‑1 (MQ=255) aCCAGCTGGGCGTAGGCCGACACGAGGTGATGGGAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATCAAGGCTGCAGGGGATCATg > 1:527661/1‑150 (MQ=255) aCCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATg > 2:645222/1‑150 (MQ=255) ccAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATgg < 1:859612/150‑1 (MQ=255) gaGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGAATTTGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGaaa < 1:18048/149‑1 (MQ=255) gCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCg < 1:448791/150‑1 (MQ=255) gCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCg < 1:1400430/150‑1 (MQ=255) cGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtg > 1:9735/1‑111 (MQ=255) cGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtg < 2:9735/111‑1 (MQ=255) cGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGtt > 1:821765/1‑150 (MQ=255) gACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 1:351768/150‑1 (MQ=255) acacGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAg > 1:45931/1‑150 (MQ=255) cgacgTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGGCTGCTGTCGCTCTTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATCAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTCAGaaa < 2:527661/150‑1 (MQ=255) gtcgtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaa > 2:501146/1‑150 (MQ=255) tcgtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaaa < 2:1276740/150‑1 (MQ=255) tcgtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGATGTCCGGTCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaaa < 1:497758/150‑1 (MQ=255) tGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGc > 2:1707746/1‑122 (MQ=255) tGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGc < 1:1707746/122‑1 (MQ=255) ggTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtgat < 2:443375/99‑1 (MQ=255) ggTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtgat > 1:443375/1‑99 (MQ=255) tGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCTAAAACCGTTAGAAAAAAAAGCCTAACAGt < 1:1484285/150‑1 (MQ=255) tGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGt > 1:545141/1‑150 (MQ=255) gTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAAc < 2:45931/150‑1 (MQ=255) cACTGCAGCGGTCAGCTTGCGGATTGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACa < 1:170078/141‑1 (MQ=255) cACTGCAGCGGTCAGCTTGCGGATTGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACa > 2:170078/1‑141 (MQ=255) aCTNCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTTCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGaa > 2:1193378/1‑150 (MQ=255) aCTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGaa < 1:1584644/150‑1 (MQ=255) cTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGaaa < 1:645222/150‑1 (MQ=255) tGCCGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCCCTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAAt < 1:1914814/150‑1 (MQ=255) tCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCa < 1:1307347/93‑1 (MQ=255) tCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCa > 2:1307347/1‑93 (MQ=255) cAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa < 1:1379705/150‑1 (MQ=255) cTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTg > 2:1815341/1‑150 (MQ=255) ttGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGACAATCATTGTCGACTgg > 2:1444015/1‑149 (MQ=255) gCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTc > 1:1683259/1‑150 (MQ=255) ggATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGt > 1:367465/1‑92 (MQ=255) ggATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGt < 2:367465/92‑1 (MQ=255) gATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATc < 2:1101481/82‑1 (MQ=255) gATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATc > 1:1101481/1‑82 (MQ=255) tGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTg > 1:2687/1‑150 (MQ=255) aGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCaa > 1:101297/1‑150 (MQ=255) gggCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACt < 2:668587/137‑1 (MQ=255) gggCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACt > 1:668587/1‑137 (MQ=255) gCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAgg < 2:594803/62‑1 (MQ=255) gCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAgg > 1:594803/1‑62 (MQ=255) gCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATg > 2:1182438/1‑150 (MQ=255) gCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTAATTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCa < 1:863597/150‑1 (MQ=255) gTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGc > 2:1689909/1‑150 (MQ=255) cccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACAt < 1:851897/150‑1 (MQ=255) ccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCt > 1:378147/1‑116 (MQ=255) ccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCt < 2:378147/116‑1 (MQ=255) ccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCGAGCACATg > 2:1046404/1‑150 (MQ=255) ccGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATg > 2:420537/1‑150 (MQ=255) cGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCGGGGGATCATGGCAGGTCCGAAACCGTTAGAAATAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGc < 1:721775/150‑1 (MQ=255) ggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCa > 2:520327/1‑150 (MQ=255) gaaacaacGCCTGGATGCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAata > 2:1371716/8‑150 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGa > 1:997847/1‑113 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATcc < 1:614373/150‑1 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTGCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATcc < 2:572333/150‑1 (MQ=255) acaacGCCTGGATGCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATcc > 1:1525624/5‑150 (MQ=255) cTCGCCTGCATCCAGGCGTTGTTTCAACAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCt > 1:1749974/1‑150 (MQ=255) cTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCt < 1:501146/150‑1 (MQ=255) tCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 2:1523743/72‑1 (MQ=255) tCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa > 1:1523743/1‑72 (MQ=255) tCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCtg > 1:1351120/1‑150 (MQ=255) cGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCtgt < 2:545141/150‑1 (MQ=255) gCCTGCATCCA‑GCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGAAAAGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCTACTGTTCGTTTGCAAATGGCCAACACATGCCAATAACCCttggt > 2:267042/1‑146 (MQ=255) cTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAggg > 2:1085258/1‑43 (MQ=255) cTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAggg < 1:1085258/43‑1 (MQ=255) cTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTc > 2:245335/1‑150 (MQ=255) cTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTc < 2:2687/150‑1 (MQ=255) tGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCg > 1:502539/1‑150 (MQ=255) tGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCg > 1:370202/1‑150 (MQ=255) aTCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGaa < 1:245335/150‑1 (MQ=255) aTCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGaa < 2:821765/150‑1 (MQ=255) tCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAAc < 1:1895104/58‑1 (MQ=255) tCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAAc > 2:1895104/1‑58 (MQ=255) | GAAGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGAA > NC_002947/1269246‑1269542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |