| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,293,265 | A→T | 5.7% | K288* (AAG→TAG) ‡ | PP_1128 → | OmpA family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,293,265 | 0 | A | T | 5.7% | 261.0 / 3.7 | 86 | K288* (AAG→TAG) ‡ | PP_1128 | OmpA family protein |
| Reads supporting (aligned to +/- strand): ref base A (35/46); new base T (3/2); total (38/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
CGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGCTGC > NC_002947/1293117‑1293413 | cGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCaa < 1:445509/150‑1 (MQ=255)cGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCaa < 1:1347460/150‑1 (MQ=255) aGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCCGGCCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGATGCCAAgg < 1:398378/150‑1 (MQ=255) gggCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGc < 2:1230446/150‑1 (MQ=255) ccGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACAAACAGGCCGCCCCCG‑ACTCGCCCCTGTCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGc < 1:233065/150‑1 (MQ=255) cgcgCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCt > 1:624144/1‑150 (MQ=255) cccTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGAAGACCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtg < 1:128074/150‑1 (MQ=255) ccTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtgg > 2:1926164/1‑150 (MQ=255) tGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCa > 2:1588590/1‑150 (MQ=255) cgcgTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGcc < 2:1457220/150‑1 (MQ=255) gcgTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGcc > 1:480429/1‑149 (MQ=255) gcgTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGcc < 2:480429/149‑1 (MQ=255) tGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTgcgg < 2:624144/150‑1 (MQ=255) gACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCTC‑GGTTATGTTGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCgaa < 1:1554621/150‑1 (MQ=255) aCCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCgaag > 1:1428274/1‑150 (MQ=255) ccccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtg < 2:689370/120‑1 (MQ=255) ccccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCtggtg > 1:689370/1‑120 (MQ=255) ccccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCgaaga > 1:916768/1‑150 (MQ=255) cccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCgaagaa > 1:797845/1‑150 (MQ=255) ccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGaaa < 2:916768/150‑1 (MQ=255) ccGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGaaa > 1:714086/1‑150 (MQ=255) cGCAAAACACCATGGTCGCGCTGCTGGCCAAATCCCAGCAGGTCGTGCCAACCATAAAGCC‑GATACGCATGGTGGAGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAAc < 1:697059/150‑1 (MQ=255) cAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCt < 2:1255500/150‑1 (MQ=255) cAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCt < 2:797845/150‑1 (MQ=255) aaaaCACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTg < 2:551294/150‑1 (MQ=255) aaCACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTa > 2:866311/1‑150 (MQ=255) acacCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAg < 2:955416/150‑1 (MQ=255) cATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCaa > 2:356781/1‑150 (MQ=255) cATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCaa > 1:532447/1‑150 (MQ=255) aTGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCt > 1:622611/1‑114 (MQ=255) aTGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCt < 2:622611/114‑1 (MQ=255) tGGTCGCTCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑AGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGCTGGCAAACCTGCCGTCAAGGCTGCGGCGAACAAACCTGTAGCCAAgg < 2:977506/150‑1 (MQ=255) tGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAgg < 1:461026/150‑1 (MQ=255) tCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCa > 2:4033/1‑150 (MQ=255) tgctgGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGc > 1:1426743/1‑150 (MQ=255) ctgGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAg < 2:698866/111‑1 (MQ=255) ctgGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGATGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAg > 1:698866/1‑111 (MQ=255) tgGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTg < 2:624653/150‑1 (MQ=255) ccAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCGGCCTTGGCAGCtgg > 1:564542/1‑88 (MQ=255) ccAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCGGCCTTGGCAGCtgg < 2:564542/88‑1 (MQ=255) cAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGaa > 1:565821/1‑150 (MQ=255) atttggccAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCACGGCCGCGGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCaaaa < 2:1205670/134‑1 (MQ=255) atttggccAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCaaaa > 1:1205670/7‑140 (MQ=255) aaTACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGa < 1:866311/150‑1 (MQ=255) aTACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGAc > 1:1601859/1‑150 (MQ=255) ccAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGc > 1:1844708/1‑150 (MQ=255) ccAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGc > 2:1875355/1‑150 (MQ=255) cagcagGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCa < 1:1141405/150‑1 (MQ=255) gcagGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGCTGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGc > 2:1161888/1‑150 (MQ=255) ggCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCaa < 2:83104/150‑1 (MQ=255) ggCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCaa < 2:1884445/150‑1 (MQ=255) ggCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTAAGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCaa < 1:800999/150‑1 (MQ=255) cgccCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGGCGTCAAGGCTGCGGCGAAGAAAc < 2:940873/107‑1 (MQ=255) cgccCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAAc > 1:940873/1‑107 (MQ=255) ccGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGaaaaaa < 2:1428274/150‑1 (MQ=255) cGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAg > 1:47778/1‑108 (MQ=255) cGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAg < 2:47778/108‑1 (MQ=255) gCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCt < 1:971655/150‑1 (MQ=255) gCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCg > 2:166609/1‑150 (MQ=255) cc‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGt > 2:827087/1‑95 (MQ=255) cc‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGt < 1:827087/95‑1 (MQ=255) cc‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCCGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGcc > 2:1421843/1‑150 (MQ=255) cTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAGAGCTGCGCCGGCCAAGcc > 2:1003850/1‑150 (MQ=255) cGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTg < 2:155517/150‑1 (MQ=255) ggcggcGCAGGATGCCAAGGCACCAGCTGCCAAGCCCGCGGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGTCCAAACCGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCaa < 1:810091/150‑1 (MQ=255) ggCGTTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTCGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCaa < 1:483137/150‑1 (MQ=255) gTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGaaa < 1:1173513/150‑1 (MQ=255) cAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCt < 1:1503735/150‑1 (MQ=255) ggATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGc < 1:795920/150‑1 (MQ=255) gATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGTAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGcc > 2:1900415/1‑150 (MQ=255) cAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa > 2:708217/1‑150 (MQ=255) cAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGNTGa < 2:1194131/150‑1 (MQ=255) aaGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa < 1:656148/149‑1 (MQ=255) aaGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa > 2:656148/1‑149 (MQ=255) cACCAGCGGCCTTGGCAGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa > 2:1582753/1‑145 (MQ=255) cACCAGCGGCCTTGGCAGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGa < 1:1582753/145‑1 (MQ=255) aCCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGaa < 2:317834/150‑1 (MQ=255) aCCAGCGGCCTTGGCAGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGAaaaaaa > 1:1012571/1‑150 (MQ=255) ccAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGaaa < 1:166609/150‑1 (MQ=255) ccAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGaaa < 1:1421843/150‑1 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTgc < 1:513293/43‑1 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTgc > 2:513293/1‑43 (MQ=255) cAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAg > 1:1896037/1‑150 (MQ=255) cTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAg < 2:1346828/150‑1 (MQ=255) tGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAACAGCTGTGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGc < 2:1601859/150‑1 (MQ=255) tGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGc > 2:1304306/1‑150 (MQ=255) ccAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGCTg > 2:686046/1‑150 (MQ=255) cAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGCTGc < 2:1426743/150‑1 (MQ=255) | CGAGGGCCGCGCCCTGAACCGCCGCGTGGAAATGTTGCTGACCCCGCAAAACACCATGGTCGCGCTGCTGGCCAAATACCAGCAGGCCGCCCCGGCACCCGCCCC‑GGCCTCGATGGTGGCGGTGCAGGATGCCAAGGCACCAGCTGCCAAGGCCGCTGGTGGCAAACCTGCCGTCAAGGCTGCGGCGAAGAAACCTGTAGCCAAGGCCAAAACGCCTGCGAAGACTGCAGCCAAGAAAAAAGCTGCGCCGGCCAAGCCTGCCGCCAAGAAAGCTGCCGTTGACAAGAAAGTAGCTGC > NC_002947/1293117‑1293413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |