| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,364,664 | A→T | 10.3% | intergenic (+28/+121) | dctA‑I → / ← PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,364,664 | 0 | A | T | 10.3% | 198.1 / 13.3 | 68 | intergenic (+28/+121) | dctA‑I/PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (29/32); new base T (3/4); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01 | |||||||||||
AAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCGGA > NC_002947/1364526‑1364813 | aaGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGAGCAGCTGCGCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTAGCCtt > 2:1910500/1‑150 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGACGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCttt < 1:1394712/150‑1 (MQ=255) aTGGACAACGACAAGCTGGCTTCTGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 1:1531313/150‑1 (MQ=255) aTGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 1:1808087/150‑1 (MQ=255) aTGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 2:1405407/150‑1 (MQ=255) ggACACCGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgtgt < 2:1384641/150‑1 (MQ=255) ggACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgtgt < 1:1128271/150‑1 (MQ=255) cAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCt < 1:1292995/138‑1 (MQ=255) cAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCt > 2:1292995/1‑138 (MQ=255) cGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAgcgc < 1:427648/150‑1 (MQ=255) gCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTtgt > 1:633582/1‑150 (MQ=255) ttCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTtgtgt > 1:219242/1‑150 (MQ=255) cGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTgg > 2:568698/1‑150 (MQ=255) ggAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTggg > 1:1623957/1‑150 (MQ=255) gAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGc < 2:1623957/150‑1 (MQ=255) gAACTGGACTCCGGTGGTGCGCCGCTGATAGATACACGATTGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGc < 1:1349026/150‑1 (MQ=255) ccGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAAt < 1:1115327/150‑1 (MQ=255) cGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTAAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAAtt > 1:702440/1‑150 (MQ=255) gtggtgCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCACG‑GACCCTGGTGGGGGCCTTGCTCAATTTc > 2:144081/1‑150 (MQ=255) tggtgCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCt < 1:1896646/150‑1 (MQ=255) tgCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTaaa < 1:1311999/150‑1 (MQ=255) ggcgcCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTaaa < 2:1410587/149‑1 (MQ=255) gcgcCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTaaaa < 1:947317/150‑1 (MQ=255) cgcTGATCGATACCCGCCCGCCGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTg > 2:1455079/1‑150 (MQ=255) cgcTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTg < 2:1372673/150‑1 (MQ=255) cgcTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTg < 1:144081/150‑1 (MQ=255) tGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGc < 2:335939/125‑1 (MQ=255) tGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGc > 1:335939/1‑125 (MQ=255) aTACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCCAGCAAAGGACGCAAATCACAAGTT‑GTGCGACATCCTTGGGTTGGCGTTGCTCAATTTCTAAAAGCTGGCGCGATTg > 1:1869019/1‑150 (MQ=255) aCCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGa > 2:1891842/1‑150 (MQ=255) aCCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGGGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGa > 2:1890132/1‑150 (MQ=255) gcccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttc > 2:1317035/1‑84 (MQ=38) gcccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttc < 1:1317035/85‑2 (MQ=38) cccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGCGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACtgtg < 2:896053/150‑1 (MQ=255) cccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACtgtg < 1:568698/150‑1 (MQ=255) cccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCACGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATGTCTAAAAGCTGGCGCGATTGGACtgtg > 1:235190/1‑150 (MQ=255) gacggacgACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGa > 1:1658214/1‑150 (MQ=255) ggacgACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTTGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCg < 2:271008/150‑1 (MQ=255) cTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGc > 2:183741/1‑150 (MQ=255) gggCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGccc < 2:603000/150‑1 (MQ=255) gTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGa > 2:1861727/1‑150 (MQ=255) gTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGa > 1:23794/1‑150 (MQ=255) tGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACg > 2:1663821/1‑150 (MQ=255) tGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACg > 2:547203/1‑150 (MQ=255) gAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACgg > 1:130825/1‑150 (MQ=255) aaGGCCCGGCTCGTTACGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGAGAACACggg < 2:969131/150‑1 (MQ=255) ccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAg > 2:1077771/1‑150 (MQ=255) cGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGcttcgc < 2:76593/150‑6 (MQ=255) tCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGt > 1:1118450/1‑150 (MQ=255) cGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg < 2:219242/150‑1 (MQ=255) ttGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTg < 2:1536897/104‑1 (MQ=255) ttGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTg > 1:1536897/1‑104 (MQ=255) caacgagCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGc > 2:1731118/5‑150 (MQ=255) gAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTg < 1:272869/64‑1 (MQ=255) gAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTg > 2:272869/1‑64 (MQ=255) aaaTGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTAc < 1:1395554/150‑1 (MQ=255) acgaaaaaGGCGACCTTTGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg < 2:1459505/127‑1 (MQ=25) acgaaaaaGGCGACCTTTGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg > 1:1459505/6‑132 (MQ=25) acgaaaaaGGCGACCTTTGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg > 1:1459454/6‑132 (MQ=25) acgaaaaaGGCGACCTTTGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg < 2:1459454/127‑1 (MQ=25) tGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCAc > 2:816636/1‑150 (MQ=255) agaAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACtt < 2:23794/150‑1 (MQ=255) gaAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTc < 2:130825/150‑1 (MQ=255) aaaGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCg > 1:534964/1‑96 (MQ=255) aaaGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCg < 2:534964/96‑1 (MQ=255) aGGCGTCCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCCGTACCACTTCCat < 2:1327476/150‑2 (MQ=255) aGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCaa < 1:1601393/150‑1 (MQ=255) aCCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACAccc > 2:1394317/1‑150 (MQ=255) aaaGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGCGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCTCTCAGCCCAGTACCACTTCCAACACCCGGa < 2:1118450/150‑1 (MQ=255) | AAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCG‑GACCCTTGTGTGGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCGGA > NC_002947/1364526‑1364813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |