| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,385,572 | G→A | 5.5% | G297G (GGC→GGT) | oprD ← | basic amino acid specific porin OprD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,385,572 | 0 | G | A | 5.5% | 254.3 / 2.4 | 86 | G297G (GGC→GGT) | oprD | basic amino acid specific porin OprD |
| Reads supporting (aligned to +/- strand): ref base G (44/35); new base A (3/2); total (48/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGAAGGTCAGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTT > NC_002947/1385423‑1385721 | aTGAAGGTCAGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcg > 2:10130/1‑150 (MQ=255) tGAAGGTCAGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTTCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcgc > 2:1146213/1‑150 (MQ=255) cAGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcgccgtcgcc < 1:1619035/150‑1 (MQ=255) aGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGtcgccgtctccg < 1:1879383/150‑1 (MQ=255) gCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGt > 1:475822/1‑150 (MQ=255) gCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGt > 1:1247003/1‑150 (MQ=255) gCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGt > 1:1246837/1‑150 (MQ=255) cTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGa < 2:850668/150‑1 (MQ=255) cTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCAAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCAAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGa > 1:280265/1‑150 (MQ=255) aaTGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACttt < 2:1246837/150‑1 (MQ=255) aaTGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACttt < 2:1247003/150‑1 (MQ=255) ccGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTgg < 2:1390667/150‑1 (MQ=255) ccGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTgg > 2:124938/1‑150 (MQ=255) ccGTAGTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTgg > 2:506232/1‑150 (MQ=255) gTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTACCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTa > 2:1845593/1‑150 (MQ=255) aTTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAgg > 1:1272378/1‑150 (MQ=255) ttCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTGTGGCAggg > 2:135623/1‑149 (MQ=255) ggCGAAGTTCAGGTCGTAGCGAACCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAg > 2:550851/1‑150 (MQ=255) gCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAgg < 1:124938/150‑1 (MQ=255) gTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTTGTCGTCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGaa > 1:1590455/1‑150 (MQ=255) gTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGaa < 1:506232/150‑1 (MQ=255) gTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGaa < 1:933234/150‑1 (MQ=255) cAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGgt < 1:952377/150‑1 (MQ=255) cAGGTCGTAGCGAGCCTGCCAGGATTTCACGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCCATACGATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGgt < 2:1706661/150‑1 (MQ=255) aGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGgtg > 1:631664/1‑150 (MQ=255) gTCTTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGtgtg > 1:79556/1‑150 (MQ=255) tCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGa > 1:752433/1‑150 (MQ=255) gTAGCGAGCCTGCAAGGATTTCACGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAgc > 2:1342030/1‑150 (MQ=255) aGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAgcgc > 1:536368/1‑150 (MQ=255) gAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGACCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGa < 1:1528295/150‑1 (MQ=255) ggCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCNCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAt < 1:1503867/149‑1 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGGGCGCCGATGTTGTAg > 1:781516/1‑150 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAg > 2:8526/1‑150 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAg < 1:500201/150‑1 (MQ=255) aGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGGGCGCCGATGTTGTAgg > 1:178326/1‑150 (MQ=255) aGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAgg > 1:1125407/1‑150 (MQ=255) aGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAgg > 1:1465380/1‑150 (MQ=255) aGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAgg > 2:42365/1‑150 (MQ=255) tttCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGcc < 2:1272378/150‑1 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGAc > 2:1137289/1‑150 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGAc > 2:1863319/1‑150 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGAc > 2:981931/1‑150 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGAc > 2:982697/1‑150 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtat < 2:381499/101‑3 (MQ=38) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtat > 1:381499/1‑99 (MQ=255) ttCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcgccg < 1:806975/82‑1 (MQ=255) ttCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcgccg > 2:806975/1‑82 (MQ=255) ttCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCt > 2:1898173/1‑150 (MQ=255) ttGAAGTCGGAGCGGGTCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcg > 1:501680/1‑150 (MQ=255) aaGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGGGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCgg < 2:178326/150‑1 (MQ=255) aaGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCgg < 2:1125407/150‑1 (MQ=255) tCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTg > 1:870792/1‑150 (MQ=255) tCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTg < 1:1898173/150‑1 (MQ=255) tCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTg > 1:1213710/1‑150 (MQ=255) gCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTGCGTGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTg < 1:229664/150‑1 (MQ=255) ccACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCTCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGt > 2:569194/1‑150 (MQ=255) ccACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGt < 1:1342030/150‑1 (MQ=255) aGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGATCATCCTGTCGCCAt < 2:79556/150‑1 (MQ=255) gCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAg < 1:938555/150‑1 (MQ=255) aGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtatg > 1:1732518/1‑57 (MQ=21) aGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtatg < 2:1732518/60‑4 (MQ=21) gAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGcgcg > 1:51998/1‑150 (MQ=255) aaGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCgg < 1:42365/150‑1 (MQ=255) aaGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCgg < 1:499778/150‑1 (MQ=255) gATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTa < 1:1863319/150‑1 (MQ=255) aTGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTAc > 2:1335263/1‑150 (MQ=255) tGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAg < 1:1148668/68‑1 (MQ=255) tGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAg > 2:1148668/1‑68 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGTTGGTGTGCGTGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGGGGTCCAGCTTGTCGCCCTCGATGGCGCGGTAATCGGcg > 1:392960/1‑149 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGaa < 1:1592413/134‑1 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGaa > 2:1592413/1‑134 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCa < 2:1465380/150‑1 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCa < 2:1220586/150‑1 (MQ=255) cACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGc < 1:981931/150‑1 (MQ=255) cACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAAGCGCCGTTGTCAAACTTGCCGCCTGCTATGGCGCGGTACTCGGCAGAGc < 1:982697/150‑1 (MQ=255) cGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCtt < 1:8526/150‑1 (MQ=255) gTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCCTGTCGCCATCGAAGGCGCGTTACt > 2:898255/1‑137 (MQ=255) gTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCCTGTCGCCATCGAAGGCGCGTTACt < 1:898255/137‑1 (MQ=255) cGATACCATAACCATAGTCTCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGc < 1:569194/150‑1 (MQ=255) gATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGct > 1:1266346/1‑150 (MQ=255) aTACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGctc > 1:40907/1‑150 (MQ=255) tACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGctct > 1:1570581/1‑150 (MQ=255) ccataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg < 2:28850/150‑1 (MQ=255) ccataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg < 2:1570581/150‑1 (MQ=255) cataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTgg > 2:568971/1‑150 (MQ=255) cataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTgg > 1:758161/1‑150 (MQ=255) cataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCAAAGGCACGGTACTCGGCAGAGCCTTCTCTCTTgg > 2:1545347/1‑150 (MQ=255) ataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCa < 1:1843182/101‑1 (MQ=255) ataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCa > 2:1843182/1‑101 (MQ=255) ataaccataGTCGCCGTCGCCGGTGACTTTCTAATAGGCCAGTGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGgt < 2:1590455/150‑1 (MQ=255) aaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGgtgt > 2:264940/1‑150 (MQ=255) gaaaGTCACCGGCGACGGCGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATGGTTGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCAt > 1:959543/4‑150 (MQ=255) gtcgccggcgccGGTGACTGTCTGGTAGGCCAGGGTGAAGGTGTGAGTGCCGATGTTGTAGGCGCCCGACAGGCTGAGCGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGAt < 2:275664/150‑1 (MQ=255) gccgtcgccgGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTAGTAGCCTCGCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGtt > 2:1205345/1‑150 (MQ=255) | ATGAAGGTCAGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTT > NC_002947/1385423‑1385721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |