| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,455,371 | G→T | 6.5% | A300S (GCC→TCC) | PP_1273 → | multidrug MFS transporter outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,455,371 | 0 | G | T | 6.5% | 285.9 / 7.2 | 92 | A300S (GCC→TCC) | PP_1273 | multidrug MFS transporter outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (43/43); new base T (3/3); total (46/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.17e-01 | |||||||||||
TGATCAATGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCG > NC_002947/1455222‑1455518 | tGATCAATGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAgg < 1:1527509/150‑1 (MQ=255) gATCAATGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGc > 2:1682362/1‑150 (MQ=255) cAATGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCACCCGGACATCCGCCAGGCCG‑a < 1:1578615/150‑1 (MQ=255) aTGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGTCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑Agg > 1:1050823/1‑150 (MQ=255) aTGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑Agc > 2:1586994/1‑149 (MQ=255) tGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCACAAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGc > 1:118983/1‑150 (MQ=255) ccTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑a > 2:827246/1‑144 (MQ=255) ccTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑a < 1:827246/144‑1 (MQ=255) cTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGc > 2:301130/1‑150 (MQ=255) cTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGc > 2:1817509/1‑150 (MQ=255) cAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCt < 2:1818381/150‑1 (MQ=255) cTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCAt > 1:716923/1‑150 (MQ=255) cTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCAt > 1:197001/1‑150 (MQ=255) tGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATg > 2:239334/1‑150 (MQ=255) cGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGccgccaccgc < 1:1682362/150‑1 (MQ=255) aGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGTCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGccgccaccgcca < 2:1050823/150‑1 (MQ=255) ccgccgCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGc > 1:269917/1‑150 (MQ=255) cgcATTCCCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTGCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGc < 2:947800/150‑1 (MQ=255) gcAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCg > 1:1520848/1‑150 (MQ=255) aGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGTCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTg < 1:365346/150‑1 (MQ=255) aGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTg < 2:235427/150‑1 (MQ=255) tctcCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGc > 2:1244392/1‑150 (MQ=255) tctcCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGGCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGc > 2:149020/1‑150 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg > 1:1644575/1‑111 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg < 2:1644575/111‑1 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTACCTGCGCCGCGGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg < 2:1644848/111‑1 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTACCTGCGCCGCGGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg < 2:1644591/111‑1 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTACCTGCGCCGCGGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg > 1:1644591/1‑111 (MQ=255) tcCAGGCCGAATTGCTGCAAGGCGGCGAGCTACCTGCGCCGCGGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGTCCG‑Agg > 1:1644848/1‑111 (MQ=255) ccAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCaa < 2:1100199/150‑1 (MQ=255) cAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATgccgc > 2:599217/1‑125 (MQ=255) cAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATgccgc < 1:599217/125‑1 (MQ=255) cAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAg < 2:758049/150‑1 (MQ=255) cAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCCGGCGCCGCCCGGACCATAATC‑GGCCGCAATCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAg < 1:798974/150‑1 (MQ=255) cGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGa < 1:1466250/150‑1 (MQ=255) gAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGAt > 2:1085383/1‑150 (MQ=255) aaTTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCCCGTCCAGCATTGGCGTGGCCAAGGCGGAtt < 1:1790487/150‑1 (MQ=255) ctgcAGGGCGGCGAGCTGTCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCGGTCCGTACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAc < 2:167321/150‑1 (MQ=255) ctgcAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAc < 1:1244392/150‑1 (MQ=255) ctgcAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAc < 1:1433427/150‑1 (MQ=255) aGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAc > 1:1343899/1‑145 (MQ=255) aGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAc < 2:1343899/145‑1 (MQ=255) aGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAg > 2:1806741/1‑150 (MQ=255) aGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAg > 2:1092448/1‑150 (MQ=255) ggcggcGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAcccccag > 1:900360/1‑147 (MQ=255) ggcgAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATc < 1:301130/150‑1 (MQ=255) ggcgAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATc < 1:1817509/150‑1 (MQ=255) ggcgAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAACATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATc > 1:1545695/1‑150 (MQ=255) gAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGc > 2:500033/1‑150 (MQ=255) cctgcGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAcc < 1:1567272/133‑1 (MQ=255) cctgcGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTAcc > 2:1567272/1‑133 (MQ=255) cgccgcAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCa < 1:1501205/150‑1 (MQ=255) gccgcAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAg > 1:1028276/1‑150 (MQ=255) ccgcAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAgt > 2:1614919/1‑150 (MQ=255) ccgcAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAgt > 2:1614882/1‑150 (MQ=255) ccgcAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAgt < 2:309889/150‑1 (MQ=255) gcagcaGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAgtgt < 2:1520848/150‑1 (MQ=255) gcagAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCgg > 1:1012964/1‑150 (MQ=255) gAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCtt > 1:650270/1‑150 (MQ=255) tttGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCACGGACATGAGCTAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAg > 1:1471103/1‑150 (MQ=255) cATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCt > 1:827772/1‑150 (MQ=255) cATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCt > 1:1233793/1‑150 (MQ=255) aTCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCTGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTg > 2:1262610/1‑150 (MQ=255) aTCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGGCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTg > 2:1023299/1‑150 (MQ=255) aTCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTg < 1:1255837/150‑1 (MQ=255) gCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGc > 1:354508/1‑150 (MQ=255) tGCCGTCCGAACTGGCCGAGCGCCGCCCGGCCATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGTAGCTGt < 2:143302/150‑1 (MQ=255) ggCCGTCCGAGCTGGCCGCGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGTCTGCATGCCGCCACCGGCAGCATTGGCGTGGCCAAGGCGGAGTTCTACCCGACCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCATGCAGcact < 2:939628/149‑4 (MQ=255) gTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCa > 1:1682169/1‑101 (MQ=255) gTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCa < 2:1682169/101‑1 (MQ=255) gAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTc < 1:1708173/150‑1 (MQ=255) aCTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCgg > 1:1653569/1‑150 (MQ=255) cTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGt < 2:118983/150‑1 (MQ=255) tGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCCGATTGCTGGCGGGCAGATGCCGCTGCCAGGCCCGGCAGCTGTCGGATTTCGGTg < 1:239334/150‑1 (MQ=255) ccGNGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATGGCGGTGGCt > 2:1199933/1‑150 (MQ=255) ccGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCt < 2:1471103/150‑1 (MQ=255) cGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTg < 2:827772/150‑1 (MQ=255) cGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTg < 1:1092448/150‑1 (MQ=255) gAGCGCCGCCCGGACATCCGCCAGGCCG‑AGCCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTgg < 1:1586994/150‑1 (MQ=255) ccgccCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTc > 1:972526/1‑150 (MQ=255) gccCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTcgc < 1:62552/150‑1 (MQ=255) cGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGcc > 1:1621191/1‑150 (MQ=255) ctCCGCCAGGTCG‑AGGTCCGCCTGCATGCCGCCACCGCCAACATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGttt < 2:1545695/149‑1 (MQ=255) agccGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGttt < 2:635201/148‑1 (MQ=255) aTCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTg < 2:292642/134‑1 (MQ=255) aTCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTg > 1:292642/1‑134 (MQ=255) aTCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGttt < 1:1085383/150‑1 (MQ=255) ccGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGc < 2:197001/150‑1 (MQ=255) gCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCt > 1:498742/1‑150 (MQ=255) gCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTAGGCTTCCAGGCCCGGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGACt > 2:530814/1‑150 (MQ=255) ccAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCtt > 2:1252959/1‑150 (MQ=255) ccAGGCCG‑AGGCCCGCCTGCAGGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCGGCATCCGCCTGTCGGGCAGTGTCGGCTGCCATGCCCTGCAGCTCTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCtt < 2:615750/150‑1 (MQ=255) cAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTc < 2:1621191/150‑1 (MQ=255) cggCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCg < 2:716923/149‑1 (MQ=255) | TGATCAATGCCCTCAGCCTGCTCGCTGCCGAGCCGCCGCGCAGTCTCCAGGCCGAATTGCTGCAAGGCGGCGAGCTGCCTGCGCCGCAGCAGAAGTTTGCCATCGGCTTGCCGTCCGAACTGGCCGAGCGCCGCCCGGACATCCGCCAGGCCG‑AGGCCCGCCTGCATGCCGCCACCGCCAGCATTGGCGTGGCCAAGGCGGATTTTTACCCCAGCATCCGCCTGTCGGGCAGTGTCGGCTTCCAGGCCCTGCAGCTGTCGGATTTCGGTGGCTGGGATTCGCGCCGGTTTGCCTTCG > NC_002947/1455222‑1455518 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |