| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,551,327 | A→C | 11.1% | intergenic (+44/+82) | groL → / ← pykA | chaperonin GroEL/pyruvate kinase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,551,327 | 0 | A | C | 11.1% | 272.0 / 26.8 | 114 | intergenic (+44/+82) | groL/pykA | chaperonin GroEL/pyruvate kinase II |
| Reads supporting (aligned to +/- strand): ref base A (54/47); new base C (6/7); total (60/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.87e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
ATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTA > NC_002947/1551182‑1551474 | atgatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCTTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAAc > 1:205387/1‑150 (MQ=255) tgatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAAcc > 1:1361971/1‑150 (MQ=255) tgatCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCACCTGCACCATCAAAAAGCCCCGGTTCGCGAGAAcc > 2:80775/1‑150 (MQ=255) atCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCgg < 2:1370132/150‑1 (MQ=255) atCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgg < 1:1045677/150‑1 (MQ=255) atCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgg < 2:578830/150‑1 (MQ=255) tCACCACCGAAGCCATGGTGGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCggg < 1:1044174/150‑1 (MQ=255) ccaccGAAGCCATGGTTGCCGACCTGCCGGAAGACCAATACGATGATGTGTAATCAGTAAGGTGTGGCATAGGTTTCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCt > 1:514660/1‑150 (MQ=255) ccaccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGACAGACTTACCCCCCTGCACCATAAAGAAGCCCCGGGTCGCGAGAACCGAGGCt > 1:285733/1‑150 (MQ=255) ccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCtttt > 2:649100/1‑150 (MQ=255) ccGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCtttt < 1:1131436/150‑1 (MQ=255) aaGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCtttttga < 2:675076/150‑3 (MQ=255) aaGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCtttttga < 2:349311/150‑3 (MQ=255) gCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑Att > 2:1087769/1‑150 (MQ=255) gCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATAAAAAAGCCCCGGTTCTCGCGAACCGGGGCTTTTTG‑Atg < 1:92382/150‑2 (MQ=39) ccATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTg < 2:1729639/150‑1 (MQ=255) ccATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTg < 2:33731/150‑1 (MQ=255) aTGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCt < 1:235413/150‑1 (MQ=255) ccGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCgggg < 2:853872/150‑1 (MQ=255) cGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGc > 2:240813/1‑150 (MQ=255) gACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGcc > 1:1763091/1‑150 (MQ=255) gCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTc < 1:1492706/150‑1 (MQ=255) ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCgca < 2:1763091/150‑1 (MQ=255) gACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGATGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGCGCCTCTTCGCAGcac > 2:772716/1‑150 (MQ=255) aaaaccAGCTGCTAGCATGCCTGATATGGGTGGCATGAGTTTCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTGT‑ATTGCTGTCGGGGCCTCTTCGCAGCACaa < 1:99751/146‑1 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGGAGcacagg > 1:112166/1‑148 (MQ=255) aaGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAg > 2:231235/1‑150 (MQ=255) aGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgc < 1:649100/150‑1 (MQ=255) ctgctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgcgc < 1:1208553/150‑1 (MQ=255) tgctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGACCCGGGGCGTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCt > 2:686577/1‑150 (MQ=255) gcgggCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCtt < 2:754044/147‑1 (MQ=255) gCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGGACCGGGGCTTTTTT‑CTTGCTGTCGGGGCCTCTTCGCAACACAAGGCTGCGCTTGAGc > 1:1741705/1‑150 (MQ=255) gCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGc > 2:1840041/1‑150 (MQ=255) tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGGCTTACGCCACTGAACCATCAAAAAGCAAAGGTTCTCGAGAACCGGGGCTGTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCtt > 2:629546/1‑150 (MQ=255) tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCGTCGCTTGAGCCtt > 1:1341143/1‑150 (MQ=255) tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTGT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCtt < 2:464040/150‑1 (MQ=255) cTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTtgtg > 1:769596/1‑150 (MQ=255) tGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCTTTTTG‑At > 2:215059/1‑102 (MQ=255) tGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCGGGGCTTTTTG‑At < 1:215059/102‑1 (MQ=38) tgggtggcatgggtggcaTGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGa > 2:596852/1‑150 (MQ=255) gggtggcatgggtggcatGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGCGCCTTGTGCTGTGaa > 1:46343/1‑150 (MQ=255) ggtggcatgggtggcatgGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGaaa > 2:1377428/1‑150 (MQ=255) gtggcatgggtggcatggGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCgggg < 1:47958/85‑1 (MQ=255) gtggcatgggtggcatggGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCTCGCGAACCgggg > 2:47958/1‑85 (MQ=255) gtggcatgggtggcatggGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAAc < 1:240813/150‑1 (MQ=255) gtggcatgggtggcatggGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAAc > 1:1708277/1‑150 (MQ=255) gcatgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAg > 2:1346796/1‑150 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgggg < 2:1555437/81‑1 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgggg > 1:1554800/1‑81 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgggg > 1:1555437/1‑81 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 2:205387/150‑1 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 1:596852/150‑1 (MQ=255) catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGt < 1:586534/150‑1 (MQ=255) atgggtggcatgggCGGCATGCTGTAAGTCAGCCTTACCCCTCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTg < 2:1361971/150‑1 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGGAACGAGTg > 1:1362709/1‑150 (MQ=255) atgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAGACGAGTg > 2:973852/1‑150 (MQ=255) gggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa < 2:1134867/150‑1 (MQ=255) gggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa < 1:692720/150‑1 (MQ=255) gtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCTGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATc > 1:1162684/1‑150 (MQ=255) tgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGa > 1:646706/1‑150 (MQ=255) tgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGAGAGAACCGGGGCTTTTTTCATATCT‑ACTTCTCCCGTCCCCTTCACAAGGCTGCGCGTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGa > 1:431890/1‑150 (MQ=255) gcggcATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCATTGTGCTGTGAAACGAGTGGATCAACCGACCa > 1:1721174/1‑150 (MQ=255) gcATGATGTGAGCCAGGCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCg < 2:900452/150‑1 (MQ=255) gcATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgg > 1:1656879/1‑62 (MQ=255) gcATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCgg < 2:1656879/62‑1 (MQ=255) cATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGTAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCgg > 1:1008686/1‑150 (MQ=255) atgatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGa < 1:1693513/150‑1 (MQ=255) atgatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGa < 1:411784/150‑1 (MQ=255) aggatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGa < 2:753938/148‑1 (MQ=255) acgatgTAAGCCAGCCGTACCCCCCTTCACCATCTAAAAGCCCCGGTTCGCTAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACAAggctc < 1:65867/148‑5 (MQ=255) gatgTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATc < 1:1923309/150‑1 (MQ=255) gTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc < 1:1087769/150‑1 (MQ=255) tAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa > 1:1068786/1‑128 (MQ=255) tAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGa < 2:1068786/128‑1 (MQ=255) gccagccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACg > 2:92942/1‑150 (MQ=255) gaagccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGt > 2:934949/3‑150 (MQ=255) gccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCa < 1:1346796/150‑1 (MQ=255) cccccTGCACCATCACAAAGCCCCGGTTCGCGAGACCCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGGGAATCAACCGACACGCGGAAGTCCTACGCGCAGGATCtt > 2:142660/1‑150 (MQ=255) cccccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCtt > 1:1576504/1‑150 (MQ=255) ccccTGCCACATCACAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTc < 2:1041106/150‑1 (MQ=255) ccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGc > 2:436720/1‑124 (MQ=255) ccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGc < 1:436720/124‑1 (MQ=255) cATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTgc < 2:1919413/74‑1 (MQ=255) cATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTg > 2:1252121/1‑150 (MQ=255) tCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGAGCTGTAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGt < 1:231235/150‑1 (MQ=255) aaaaGCCCCGGTTCTCGCGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGcc > 2:89598/1‑150 (MQ=255) aaaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGAACAAGGCTGCGCTTGAGCCCTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCa < 2:1593377/128‑1 (MQ=255) gCCCCGGTTCTCGCGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCg > 1:1582809/1‑150 (MQ=255) ccccGGTTCTCGCGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATAACACCATCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGa > 1:1057449/1‑150 (MQ=255) ccccGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGa > 2:1794636/1‑150 (MQ=255) cccGGTTCTCGCGAACCGGGGCTTTTTG‑A‑TGGTGCAGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGc < 2:1229385/142‑1 (MQ=37) cccGGTTCTCGCGAACCGGGGCTTTTTG‑A‑TGGTGCAGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGc > 1:1229385/1‑142 (MQ=37) cccGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 2:716273/1‑150 (MQ=255) cccGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 1:418613/1‑150 (MQ=255) cccGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGAt > 1:951243/1‑150 (MQ=255) cGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATgg > 1:1510445/1‑150 (MQ=255) ttCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACAGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgtgt < 1:1559532/150‑1 (MQ=255) tCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGtgtg < 1:1794636/150‑1 (MQ=255) tCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGtgtg < 2:514660/150‑1 (MQ=255) cgAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTa < 1:996621/150‑1 (MQ=255) | ATGATCACCACCGAAGCCATGGTTGCCGACCTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTT‑ATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCTGCGCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTA > NC_002947/1551182‑1551474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |