| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,676,202 | C→G | 7.2% | intergenic (+22/‑38) | hom → / → thrC | homoserine dehydrogenase/threonine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,676,202 | 0 | C | G | 7.2% | 276.1 / 10.5 | 93 | intergenic (+22/‑38) | hom/thrC | homoserine dehydrogenase/threonine synthase |
| Reads supporting (aligned to +/- strand): ref base C (43/42); new base G (3/4); total (46/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
CCAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGC > NC_002947/1676058‑1676350 | ccAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgc > 1:918532/1‑150 (MQ=255)ccAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgc < 2:717614/150‑1 (MQ=255) aaTGATCCTGGTGACGCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCGCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTGGAGCAGCTCAACTAACAAATATTGCCGACGAGCCGCCCGCGcgg > 2:797038/1‑150 (MQ=255) aaTGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcgg > 1:150531/1‑150 (MQ=255) gATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggccc > 2:1861082/1‑150 (MQ=255) ccTGGTGACCCATGGCGTGGTCGAGCAGCGTCTCCATGACGCATAAGGCTTTCGCCGGGCCCGGCAGGACGTGGTCGGCAAGGTTGTGCGCCTTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggcccgtc < 2:989377/150‑4 (MQ=255) ccTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggcccgtc < 1:1307289/150‑4 (MQ=255) ccTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggcccgtc < 1:1255126/150‑4 (MQ=255) cTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggccccggc > 1:1620957/1‑150 (MQ=255) cTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATGGCCGACGGGCCGCGCGGGcggcccgtcg < 1:1209583/150‑5 (MQ=255) tGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGCCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCa < 2:1599215/150‑1 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCAt > 1:1807470/1‑150 (MQ=255) cATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATc < 2:1587689/150‑1 (MQ=255) cATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAACAGCTCACATAACCAATTTTGTCGTGGATCAGCGCCTGCGGCGCCTGCCCCACCATc > 2:206306/1‑150 (MQ=255) gCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGACGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCCTTCGCGCCGGGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAg < 2:1307851/150‑1 (MQ=255) gTCGAGCAGCGTATCAATGACGCCATCGTCGCTATGGAAGCCCTGCAGGACGTGGGCGGCAAGGTTGTGCGCATTAGAGCTGGTATTCACAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTg > 1:432173/1‑150 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCAc > 1:434810/1‑150 (MQ=255) gAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCAc < 2:1704023/150‑1 (MQ=255) agcGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCAt < 2:1627036/150‑1 (MQ=255) gcGTATCAATTACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATg < 2:794159/150‑1 (MQ=255) cGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATgc < 2:1828918/150‑1 (MQ=255) tCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCta > 1:448496/1‑150 (MQ=255) cAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCtat > 1:273351/1‑150 (MQ=255) aaTGCCGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGATGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCtata > 2:1120865/1‑150 (MQ=255) aaTGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGAGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGTGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCtata > 1:566264/1‑150 (MQ=255) aTGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCTACGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTatat < 1:206306/150‑1 (MQ=255) aTGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTatat > 1:1233260/1‑150 (MQ=255) gACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCa < 2:1620957/150‑1 (MQ=255) gACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCa < 1:1160756/150‑1 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTa > 1:653800/1‑150 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACATAAGCGCTATATCAgaa > 2:1543409/1‑148 (MQ=255) gCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCCGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTa > 2:189593/1‑150 (MQ=255) gCCATCCTCACTCTAAAAGCCCTGCACGACCTGCTCGGCAAGGCTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTa > 2:21258/1‑150 (MQ=255) gtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGaa < 2:1233768/117‑1 (MQ=255) gtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGaa > 1:1233768/1‑117 (MQ=255) cgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGc < 1:541974/150‑1 (MQ=255) ctctGGAAGCCCTGCAGGACGTGGTCGTCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCa < 1:1861082/150‑1 (MQ=255) ctctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCACGCGCGGCCCCGTCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCa < 2:1053697/150‑1 (MQ=255) tctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAg > 1:1884303/1‑150 (MQ=255) gAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTTCCCGCGGCCAGGCAc < 1:1808429/150‑1 (MQ=255) aaaGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGGTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGACCCGGCCCCAGCATCGAAGGT‑TTGCCCCCATGCGCTATATCAGTACCCGCGGCCAGGCAc < 1:76177/149‑1 (MQ=255) aaGCCCTGCAGGACGTGGTCGGGAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGCGCCGCCCGCGCGGCCCCCGTTTAATC‑GAGAATTTGTACCACCCTTGCCCTATATCAGTACCCGCGGCCAGGCAcc > 2:880410/1‑150 (MQ=255) aGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCTTCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCg < 1:346871/150‑1 (MQ=255) aGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCg > 2:162896/1‑150 (MQ=255) cccTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGc > 1:29602/1‑150 (MQ=255) cccTGCAGGACGCGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcg < 1:1327831/82‑1 (MQ=255) cccTGCAGGACGCGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcg > 2:1327831/1‑82 (MQ=255) ccTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGcc < 1:1898867/150‑1 (MQ=255) cTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTTCCGACGGTCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGccc > 1:233186/1‑150 (MQ=255) ggACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCa > 1:1704765/1‑121 (MQ=255) ggACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCa < 2:1704765/121‑1 (MQ=255) gACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAAtt < 2:1665496/150‑1 (MQ=255) aCGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAAttt < 2:273351/150‑1 (MQ=255) cGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGCGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTc < 2:150531/150‑1 (MQ=255) ggTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGaa < 2:653800/150‑1 (MQ=255) gTCGGCAAGGTTGTGCGCATTCGCGTCGAACAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAg > 2:1875316/1‑150 (MQ=255) tCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGa > 2:1869809/1‑150 (MQ=255) cGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGAc < 1:880410/150‑1 (MQ=255) gCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACCAATATTGCCGACGGGCCGCGCGggcggc < 1:1484662/68‑1 (MQ=255) gCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGggcggc > 2:1484662/1‑68 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGtgc > 2:1827745/1‑150 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGtgc > 2:261309/1‑150 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCACTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGAAGtgg > 2:480690/1‑149 (MQ=255) aGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAGTATTGCCGACGGGCCGCCCGCGCGGCCACGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGGCGtgct < 2:124901/150‑1 (MQ=255) ggTTGTGCGCATTTGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGtgctg < 2:1917464/150‑1 (MQ=255) ttGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTgctgct > 2:1340900/1‑150 (MQ=255) aTTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGGCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCTGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcc < 1:717207/150‑1 (MQ=255) ttCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGTGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGGACCCGCGGCCAGGCGCCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcct < 2:566264/150‑1 (MQ=255) gcgTCGAGCAGCTCAACTAACAAATGTTGCCGCCGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGACAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcctggc < 1:434570/150‑1 (MQ=255) gTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTCTATCAGTACCCGCGGCCAGGCAACGGCCCTGAATTTCGAAGCAGTGCGGCTGGCTGGCCGGGCCa > 2:315637/1‑150 (MQ=255) gAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCta < 2:782950/82‑1 (MQ=255) gAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCta > 1:782950/1‑82 (MQ=255) tCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggcgg < 1:1120865/150‑1 (MQ=255) ccAACTAACCAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggcgg < 2:1580658/149‑1 (MQ=255) cAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACggcggc > 2:720825/1‑150 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCAcc < 1:836310/64‑1 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCAcc > 2:836310/1‑64 (MQ=255) tAACAAACATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGt > 1:385958/1‑150 (MQ=255) aaCAAATATTGCCGCCGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTa < 1:1133598/150‑1 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGt > 2:364525/1‑150 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGt > 1:301862/1‑150 (MQ=255) atatTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGc < 1:1614153/150‑1 (MQ=255) atatTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGc < 1:600925/150‑1 (MQ=255) gCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGaa < 2:29602/150‑1 (MQ=255) ccGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATCTCAGTACCCGCGGGCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGGGCCGGaaa > 1:483833/1‑150 (MQ=255) ccGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGaaa > 2:590739/1‑150 (MQ=255) gACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAAc < 2:1233260/150‑1 (MQ=255) gACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAAc < 2:918532/150‑1 (MQ=255) ggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGaaaa < 2:597816/146‑1 (MQ=255) ggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGaaaa > 1:597816/2‑147 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTg > 1:146184/1‑150 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTg > 2:68100/1‑150 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGAACCCATGCGATATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTg > 1:800054/1‑150 (MQ=255) cgcccgcGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGTCTATACGTGCCGGAAAACCTGCCAc > 2:951013/1‑150 (MQ=255) cccgcGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGAc < 1:915960/90‑1 (MQ=255) cccgcGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGAc > 2:915960/1‑90 (MQ=255) cccgcGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGc < 2:385958/150‑1 (MQ=255) | CCAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGT‑TTGCACCCATGCGCTATATCAGTACCCGCGGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGC > NC_002947/1676058‑1676350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |