| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,681,341 | C→A | 8.5% | N123K (AAC→AAA) | PP_1476 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,681,341 | 0 | C | A | 8.5% | 211.5 / 6.3 | 71 | N123K (AAC→AAA) | PP_1476 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (29/35); new base A (3/3); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 | |||||||||||
CTGGACGATCGCGTGCTGCACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGCATGAAGTGCAACTGCA > NC_002947/1681192‑1681490 | cTGGACGATCGCGTGCTGCACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAAc > 1:742691/1‑150 (MQ=255) tGGACGATCGCGTGCTGCACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAAcc > 2:192888/1‑150 (MQ=255) ggACGATCGCGTGCTGCTCCGCAGTTAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGCGCTCGCGCCGTAACG‑ACCGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCt < 1:1533347/150‑1 (MQ=255) aCGATCGCGTGCTGCACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGa < 1:456974/150‑1 (MQ=255) tgctgcACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGa < 2:1124444/150‑1 (MQ=255) cACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGACGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCAtt < 2:1037606/150‑1 (MQ=255) aCTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTg > 1:1108746/1‑150 (MQ=255) tGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGcc < 1:573103/150‑1 (MQ=255) tGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCtgt < 2:1557829/150‑1 (MQ=255) ggCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCaa < 1:192888/150‑1 (MQ=255) ccAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAaga > 1:1737292/1‑150 (MQ=255) ccAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAaga > 1:342638/1‑150 (MQ=255) ccAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAaga > 2:831318/1‑150 (MQ=255) cAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACAGTTATGGTCAAG‑GTGTTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAagag < 2:1483463/150‑1 (MQ=255) aGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAgg > 1:1229508/1‑150 (MQ=255) gATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTCCGACTGTTGTTGGGTAAAGTTTTGATCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTg < 1:231640/150‑1 (MQ=255) aTGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTgg > 1:108985/1‑150 (MQ=255) aTCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAAccc > 1:1379595/1‑150 (MQ=255) cGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTg < 2:460247/150‑1 (MQ=255) gCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTgg < 1:1052545/150‑1 (MQ=255) cTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcg > 1:1859051/1‑150 (MQ=255) gACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgac > 2:1615580/1‑150 (MQ=255) aCCTGGTGCTCGCGCCGTACCG‑AATGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgacc > 2:1282906/1‑150 (MQ=255) cTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgaccga > 2:1673951/1‑150 (MQ=255) cTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgaccga > 2:1477615/1‑150 (MQ=255) gTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACAt < 2:1713603/150‑1 (MQ=255) gTGCTCGCGCCGGACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACAt < 1:1529260/150‑1 (MQ=255) cTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGcc < 1:1477615/150‑1 (MQ=255) tCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATg > 2:1724244/1‑147 (MQ=255) tCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATg < 1:1724244/147‑1 (MQ=255) cgcgCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCcgc < 1:1777794/150‑1 (MQ=255) cgcgCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGAGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGTCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCcgc < 2:573946/150‑1 (MQ=255) ccG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCa > 1:1884721/1‑150 (MQ=255) aCGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTg < 1:622273/150‑1 (MQ=255) cGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTgg < 1:1673951/150‑1 (MQ=255) gCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTggg > 1:1750111/1‑150 (MQ=255) aCCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGAc > 2:341423/1‑150 (MQ=255) gCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtga > 2:1300486/1‑150 (MQ=255) cTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATc > 1:493682/1‑150 (MQ=255) ggCTTACGGCAGCCAGCGAGTGTGGGAGGGACAGCAGGTCAGGGCTGTAGCACAGCTCAAAAACCGAAGCAGTTCCGCGGTGCCTCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAg < 2:1859051/150‑1 (MQ=255) ggCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGt > 2:1666561/1‑150 (MQ=255) aGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACg < 2:436195/150‑1 (MQ=255) ccTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGt > 2:223737/1‑150 (MQ=255) tGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCt < 1:1792128/91‑1 (MQ=255) tGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCt > 2:1792128/1‑91 (MQ=255) aGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGt < 1:1702089/150‑1 (MQ=255) gtgtGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGtg > 2:474695/1‑150 (MQ=255) ggAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgaccga > 2:1839548/1‑90 (MQ=255) ggAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGcgaccga < 1:1839548/90‑1 (MQ=255) gTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACg > 1:1549463/1‑131 (MQ=255) gTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACg < 2:1549463/131‑1 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg < 2:646254/112‑1 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg < 2:647013/112‑1 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg < 2:653012/112‑1 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg > 1:653012/1‑112 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg > 1:647013/1‑112 (MQ=255) tAAAGTGGTGAGCGCGGTCAAGAAACTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGtg > 1:646254/1‑112 (MQ=255) aaGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTg > 1:875874/1‑150 (MQ=255) aGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTgg < 2:108985/150‑1 (MQ=255) aGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTgg < 1:460151/150‑1 (MQ=255) aGTGGTGAGCGCGGTCAAGAACCTGAAAAACCGGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAGACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTgg < 1:679894/150‑1 (MQ=255) tgAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAaga < 1:1340854/52‑1 (MQ=255) tgAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAaga > 2:1340854/1‑52 (MQ=255) tgAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGc < 1:1666561/150‑1 (MQ=255) gAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAg > 1:610109/1‑148 (MQ=255) gAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAg < 2:610109/148‑1 (MQ=255) gAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGCa < 1:474695/150‑1 (MQ=255) cgGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCaa < 2:1138961/44‑1 (MQ=255) cgGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCaa > 1:1138961/1‑44 (MQ=255) ggTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGCATGAAGt < 1:1300486/150‑1 (MQ=255) aGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTTGTGACTGACGACCGTGGCCAGCATGAAGTGCAAc < 2:342638/150‑1 (MQ=255) aCCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGtga < 2:376887/117‑1 (MQ=255) aCCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGtga > 1:376887/1‑117 (MQ=255) ccTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAg > 2:630026/1‑101 (MQ=255) ccTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAg < 1:630026/101‑1 (MQ=255) ccTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGCATGAAGTGCAACTGCa < 2:1480495/150‑1 (MQ=255) | CTGGACGATCGCGTGCTGCACTGGATTGAAGTTGGCCAGCCCGATGCCGATCGCCTGACCTGGTGCTCGCGCCGTACCG‑AACGCACCAGCTTGCTGGCTTACGGCAGCCTGCGAGTGTGGGAGGGTAAAGTGGTGAGCGCGGTCAAGAACCTGAAAAACCTGAGCATTGCCGCTGTGCCGCAAGAGGTGCTGGAAACCCTGGCGACCGACATGCCGCGTAGCATCAAGTGGGACGTGATGATCAGTGAAGGTACGGTATTCGTGACTGACGACCGTGGCCAGCATGAAGTGCAACTGCA > NC_002947/1681192‑1681490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |