| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,879,936 | T→G | 5.3% | intergenic (+78/+58) | PP_1686 → / ← PP_1687 | glutathione peroxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,879,936 | 0 | T | G | 5.3% | 212.0 / 3.3 | 76 | intergenic (+78/+58) | PP_1686/PP_1687 | glutathione peroxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (37/35); new base G (2/2); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01 | |||||||||||
TCCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGA > NC_002947/1879787‑1880084 | tcCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGt > 1:1208473/1‑150 (MQ=255)tcCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGt > 1:1636946/1‑150 (MQ=255) cAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTtc > 2:1728858/1‑150 (MQ=255) cTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCt < 1:214632/150‑1 (MQ=255) tGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTg > 1:531935/1‑150 (MQ=255) ccAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGAACGGCCTCCTGAAg < 2:849333/150‑1 (MQ=255) cAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGt > 2:279836/1‑150 (MQ=255) aCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGAACGGCCTCCTGAAGtc > 1:277678/1‑147 (MQ=39) aCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGAACGGCCTCCTGAAGtc < 2:277678/148‑2 (MQ=39) ccGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCg < 1:999430/150‑1 (MQ=255) cGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCgg < 2:1224025/150‑1 (MQ=255) cGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCgg < 1:1510130/150‑1 (MQ=255) tCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCg > 1:1521964/1‑142 (MQ=255) tCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCg < 2:1521964/142‑1 (MQ=255) cccGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaaga > 2:834449/1‑150 (MQ=255) ccGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaagat < 2:1300690/150‑1 (MQ=255) gcgTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaagatca > 1:884829/1‑150 (MQ=255) cgcgCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTcc < 2:782526/122‑1 (MQ=255) cgcgCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTcc > 1:782526/1‑122 (MQ=255) ctATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGAGCAAGATCAAGCACAGGAAGtg > 2:314271/1‑150 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatca < 1:441225/130‑1 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatca > 2:441225/1‑130 (MQ=255) tCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggct < 1:1071921/150‑1 (MQ=255) gAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggctgg > 1:445414/1‑150 (MQ=255) aaaaGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggctggc > 1:764630/1‑150 (MQ=255) gCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCgg < 1:1728858/150‑1 (MQ=255) gCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACt < 1:834449/150‑1 (MQ=255) tCACAGGCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTGGGAGGGGCGGCGCAGTTCAGGCGACGCAGATTGCGACTTGAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCa < 2:996159/150‑1 (MQ=255) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCa > 1:1546439/1‑150 (MQ=255) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCa > 1:1489985/1‑150 (MQ=255) acaGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCAcc < 2:1636946/150‑1 (MQ=255) aGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGt < 2:1489985/150‑1 (MQ=255) ccGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGtgc > 1:1139123/1‑150 (MQ=255) aCCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGtgcatgca < 2:1272026/150‑1 (MQ=255) cAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACg > 1:590868/1‑150 (MQ=255) tGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTTACCGTGCATGCACGGtgaa < 2:531935/150‑4 (MQ=255) gcTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTCCATGCACGGTAATAGc > 2:972005/1‑150 (MQ=255) ttGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggctgg < 2:1556436/112‑1 (MQ=255) ttGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggctgg > 1:1556436/1‑112 (MQ=255) tgctgcGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGccac < 1:972005/150‑1 (MQ=255) gcggcgTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAAc < 2:1225914/150‑1 (MQ=255) ggcgTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGTGAACAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCg > 2:223621/1‑150 (MQ=255) gTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcac < 1:279836/150‑1 (MQ=255) ttGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatc < 1:1562544/76‑1 (MQ=255) ttGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatc > 2:1562544/1‑76 (MQ=255) gCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcaccac < 2:1533123/150‑1 (MQ=255) tttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCCGAAGTTGCGGGATCAAGATCAAGCACAGAAAGTGGCTGGCTGCGGGGCACTTCACCGTGCCTGCACGGTAATAGCCACCAACCGccccacca > 1:806128/1‑150 (MQ=255) attAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCAGAAGTTGCGGGATAAAAATCAAGCACAGGAAGTGGCTGACTACAGGGCACTTCACCGTGCATGCACGGTAATAGCGACCAACCAcaccacca > 2:566112/2‑150 (MQ=38) aaGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCAccgg > 2:553254/1‑150 (MQ=255) ggCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGACGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGacca > 1:1471934/1‑150 (MQ=255) gCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGaccac > 1:773994/1‑150 (MQ=255) ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGc < 2:1546439/150‑1 (MQ=255) aGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCAccggccg < 2:1446061/137‑1 (MQ=255) aGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCAccggccg > 1:1446061/1‑137 (MQ=255) aGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcaca > 1:1324147/1‑150 (MQ=255) aGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcaca > 1:1898221/1‑150 (MQ=255) ggCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGCTCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacac > 1:1672299/1‑150 (MQ=255) ggCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacac > 2:1429003/1‑150 (MQ=255) ggCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacac > 1:1387391/1‑150 (MQ=255) gCGACGCAGATTGCGACTTCAGGATGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacaca < 1:587700/150‑1 (MQ=255) gCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacaca > 2:524145/1‑150 (MQ=255) gCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCAACAGcactca < 2:934632/150‑1 (MQ=255) aCGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacacacac < 2:1898221/150‑1 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGcaca < 2:1736629/58‑1 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGcaca > 1:1736629/1‑58 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACaa > 2:1143750/1‑150 (MQ=255) aGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAAt > 1:1263154/1‑150 (MQ=255) aGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAAt < 1:1163968/150‑1 (MQ=255) aGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAAt < 1:1622917/150‑1 (MQ=255) aGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAAt < 2:1387391/150‑1 (MQ=255) cgcaaCTTCAGGAGAACGGCCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCa > 2:140019/5‑150 (MQ=255) gCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCAc < 2:590868/150‑1 (MQ=255) gACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCg < 2:1139123/150‑1 (MQ=255) gCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAAc > 1:695696/1‑150 (MQ=255) ccGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACt > 1:1732517/1‑150 (MQ=255) cGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGca > 2:883866/1‑119 (MQ=255) cGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGca < 1:883866/119‑1 (MQ=255) gTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGa < 1:341508/150‑1 (MQ=255) | TCCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGA > NC_002947/1879787‑1880084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |