| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,899,038 | T→C | 8.8% | intergenic (+66/‑454) | PP_t18 → / → PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,899,038 | 0 | T | C | 8.8% | 190.5 / 7.2 | 68 | intergenic (+66/‑454) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| Reads supporting (aligned to +/- strand): ref base T (29/33); new base C (3/3); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
ATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGC > NC_002947/1898891‑1899186 | ataGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCtttttt > 1:1853690/1‑150 (MQ=34) gcgcAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTAt < 1:24022/150‑1 (MQ=37) cgcAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTAtt > 1:1822252/1‑150 (MQ=38) gcAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTAttt > 1:1711455/1‑150 (MQ=39) aGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCt < 1:1597949/150‑1 (MQ=40) ggTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGca < 2:15272/150‑1 (MQ=255) gTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTAttt > 2:165507/1‑144 (MQ=39) gTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTAttt < 1:165507/144‑1 (MQ=39) tttcAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAAAAAGCGACCCTAAGGTCGCTTTCTTTtttacttccgggt < 2:309510‑M1/149‑14 (MQ=255) gtacAGTCGGTTAGAAGACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGCACGCCG‑GCCAAAAGCTCACTAAACG‑AGCCCACTGGACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGcatcat < 1:1572108/147‑1 (MQ=14) gTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CCCTTCCAG‑GGCCCTCTGAACACCCGGAAGTAAAAAAAAAAGCGACCCTAAGGTCGCTTTCTTTt < 2:1054381‑M1/138‑2 (MQ=255) gTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAAAAAGCGACCCTAAGGTCGCTTTCTTTt > 1:1054381‑M1/1‑137 (MQ=255) ttCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATg > 2:88823/1‑150 (MQ=255) tCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATc < 2:1853690/150‑1 (MQ=255) gTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGtt > 1:684279/1‑150 (MQ=255) tACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGccc > 1:1776647/1‑150 (MQ=255) tACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAAAAAGCGACCCTAAGGTCGCTTTCTTTtttacttccgg > 1:1547116‑M1/1‑121 (MQ=255) tACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAAAAAGCGACCCTAAGGTCGCTTTCTTTtttacttccgg < 2:1547116‑M1/132‑12 (MQ=255) aCCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCt < 2:1883664/150‑1 (MQ=255) cGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGc > 1:1608171/1‑150 (MQ=255) gCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTa < 2:1150967/117‑1 (MQ=39) gCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTa > 1:1150967/1‑117 (MQ=39) cACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAggg < 2:1776647/150‑1 (MQ=255) aCGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAgggg > 1:1558865/1‑150 (MQ=255) cGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAg > 1:265775/1‑150 (MQ=255) tCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTgcgc < 1:1776783/150‑1 (MQ=255) gcgGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCa < 2:1673371/150‑1 (MQ=255) ggTTCGAGTCCCGTCCGCTGCGCCATAAT‑‑CGCAACCTGCGTGGCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCActc < 2:151884/150‑1 (MQ=25) ttCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACtctt < 2:732746/150‑1 (MQ=255) ttCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACtctt > 1:1163866/1‑150 (MQ=255) cGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCa > 1:1019635/1‑150 (MQ=255) gCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCAc > 2:1862083/1‑132 (MQ=255) gCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCAc > 2:1862228/1‑132 (MQ=255) gCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCAc < 1:1862228/132‑1 (MQ=255) gCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCAc < 1:1862083/132‑1 (MQ=255) cTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCa < 2:1822252/150‑1 (MQ=255) cgcCATATTC‑CACTTCCAG‑GGCCCACTGAACATGCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCa < 2:109899/150‑1 (MQ=255) cgcCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCa < 1:88823/150‑1 (MQ=255) atatTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCaa > 2:1552407/1‑87 (MQ=255) atatTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCaa < 1:1552407/87‑1 (MQ=255) ttC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCaaa > 1:1437520/1‑150 (MQ=255) tC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAAc < 2:1019635/150‑1 (MQ=255) c‑cACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAAcc > 1:1474144/1‑150 (MQ=255) tCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTcc < 2:1474144/150‑1 (MQ=255) cACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCAcc > 2:1862645/1‑150 (MQ=255) aCTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCg < 2:684279/150‑1 (MQ=255) tGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAGACCCGTCCTCGATCACCGGc > 1:1737071/1‑150 (MQ=255) aaCACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCGACTGTTCTTCCCGCAAGATCAGCGCCTCAGACCCGTCCTCGATGACCGGCAt > 2:1039779/1‑150 (MQ=255) ccGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCt > 2:94688/1‑150 (MQ=255) ccGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCt > 2:1219657/1‑150 (MQ=255) ccGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCt > 2:545101/1‑150 (MQ=255) ggAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTgg < 1:1398738/150‑1 (MQ=255) tAACAAAGAAAGCGACCTTAGAGTCGCTTTTTTTgttacttccgggtgttcagtgggccctggaagtggaatatggcgcagcggacgggactcgaacccgcgacccccggcgtgacaggccggtattctaaccgactgaactaccgctgc > 1:458669‑M1/1‑34 (MQ=255) aaaaaGAAAGCGACCTGAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATgg < 2:173093/150‑1 (MQ=255) aaagaaagCGACCTTAGGGTCGCTTTTTTTtttacttccgggtgttcagtgggccctggaagtggaatatggcgcagcggacgggactcgaacccgcgacccccggcgtgacaggccggtattctaaccgactgaactacc < 2:1305507‑M1/141‑112 (MQ=255) aaagaaagCGACCTTAGGGTCGCTTTTTTTtttacttccgggtgttcagtgggccctggaagtggaatatggcgcagcggacgggactcgaacccgcgacccccggcgtgacaggccggtattctaaccgactgaactacc > 1:1305507‑M1/1‑30 (MQ=255) aaagaaagCGACCTTAGGGTCGCTTTTTTTATTTTTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGa < 2:600533/150‑1 (MQ=255) aaagaaagCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGa < 2:1558865/150‑1 (MQ=255) aagaaagCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAGACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAg < 2:1737071/150‑1 (MQ=255) aagaaagCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAg > 2:1684230/1‑150 (MQ=255) agaaagCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAgg < 2:1569343/150‑1 (MQ=255) agaaagCGACCTTAGAGTCGCTTTTTTTgttacttccgggtgttcagtgggccctggaagtggaatatggcgcagc < 1:900291‑M1/76‑49 (MQ=255) agaaagCGACCTTAGAGTCGCTTTTTTTgttacttccgggtgttcagtgggccctggaagtggaatatggcgcagc > 2:900291‑M1/1‑28 (MQ=255) aaaagCGACCCTAAGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAggg > 2:1842437/2‑150 (MQ=255) aaagCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGTCACTCTGCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGc > 1:231971/1‑150 (MQ=255) aagCGACCCTAAGGTCGCTTTCTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCa > 1:1243129/1‑150 (MQ=255) cGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTg < 1:1684230/150‑1 (MQ=255) ttAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAATCCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCAt < 2:265775/150‑1 (MQ=255) gTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAACGGGCTAGCTGCGCCACTCTTCTTCCCGCAGAGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTgg < 2:980761/150‑1 (MQ=255) ttttttATTTCTGCATCATGCAATCGTTTACGCCCTCCTTCAGGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTg < 1:17765/150‑1 (MQ=255) tttttATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAAttcc < 1:545101/150‑3 (MQ=255) tttttATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGc < 2:1437520/150‑1 (MQ=255) | ATAGCGCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCGCTGCGCCATATTC‑CACTTCCAG‑GGCCCACTGAACACCCGGAAGTAAAAAAGAAAGCGACCTTAGGGTCGCTTTTTTTATTTCTGCATCATGCAATCGTTTACGCCCTGCAACAAGGGGCTAGCTGCGCCACTCTTCTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGC > NC_002947/1898891‑1899186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |