| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 197,179 | A→G | 6.5% | V895V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 197,179 | 0 | A | G | 6.5% | 591.5 / 18.4 | 210 | V895V (GTA→GTG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base A (93/103); new base G (9/5); total (102/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 213 total aligned reads displayed.
CCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGT > NC_002947/197031‑197326 | ctgTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGAGTaa < 1:1104782/148‑1 (MQ=255) cGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGCACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt < 1:1455415/150‑1 (MQ=255) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCa > 1:1341543/1‑150 (MQ=255) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTACAAACAAAACTTAGCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCa > 2:1418196/1‑150 (MQ=14) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACGGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCa < 2:826105/150‑1 (MQ=21) cAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAc < 2:1363869/150‑1 (MQ=25) cAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCAc < 2:1475838/150‑1 (MQ=255) gTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTac > 2:1827294/1‑150 (MQ=17) gTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCACGTCGGTCACCGAAGGCGGCGTAATCACCTac > 1:620274/1‑150 (MQ=38) cACCATCGAGAACGCCACATGCGGTACTTTCGAGCATCTGACCCCGATCCTTACTCCGGCTCCGGCCACCATCAACATCTCCGTCGATGCCACCACCGT‑TACCCTGCCCGCCGGCCCTTCGGTCACCGAAGGCGGCGTAATCACCTacac < 2:53293/150‑1 (MQ=2) cACCATCGAGAACGCCACAGGCGGTAATTTCGAGTAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTacac > 2:706712/1‑150 (MQ=12) cACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTacac < 1:1286371/150‑1 (MQ=39) ccATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCg > 2:1339919/1‑150 (MQ=38) cATCGAGAACGGCACAGGCGGTAAGTTCGAGCAACTGACCCCGAAGCCGACCCCGCCTTAGACTACGATCAACGACCCGGACGATGCCACCACCGC‑GACCCTGACGGCGAGCCCCTCGGTCACCGAAGGCGGCGGGATCACTTACACCgg > 2:843180/1‑149 (MQ=11) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGt > 1:1592748/1‑150 (MQ=38) tCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGa > 1:1449347/1‑150 (MQ=39) gagaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGAcc < 2:1809821/150‑1 (MQ=38) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACGGGACCGCGGCTCAGAGCGCGAGCGACGACGCGGCCGATGACATCACCGC‑GACCCTGACGGCGAGCACGACGGTCACCGAAGGCGGCGTACTCACCTACACCGTGAccc > 2:46340/1‑150 (MQ=11) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGAccc > 2:1677752/1‑150 (MQ=255) aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGGAATCACCTACaccctgaccctg > 1:247380/1‑150 (MQ=255) cctccACAGGCGGTAATTTCGCGCAACTGCCCCCGAATCCGCCCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 2:1248578/147‑1 (MQ=255) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATTCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 1:402830/150‑1 (MQ=255) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 2:1801260/150‑1 (MQ=39) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 2:365136/150‑1 (MQ=38) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAg < 1:1866239/150‑1 (MQ=38) gCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGAcc > 1:543458/1‑144 (MQ=255) ccACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCa > 2:1159726/1‑150 (MQ=39) cacaGGCGGTAATTTCGGGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCa < 1:361241/128‑1 (MQ=255) cacaGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTac > 1:1884792/1‑133 (MQ=14) cacaGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAgaga > 1:1248578/1‑147 (MQ=37) cacaGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCaa > 1:764348/1‑150 (MQ=38) gggCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATcc < 1:83434/149‑1 (MQ=25) gCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTg > 1:1301507/1‑150 (MQ=25) ggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGcc > 2:791576/1‑150 (MQ=35) gTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATAAACTACACCGTGACCCTGAGCAATCCTGccc < 1:1791673/150‑1 (MQ=255) tCGAGCAACTGCCCCCGAATCCGACCCCGCCTCAGACCACGATCAACGACTCGCTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGACGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGc < 1:692261/150‑1 (MQ=255) tCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATc > 2:1094301/1‑138 (MQ=35) gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCg < 2:944545/150‑1 (MQ=35) aGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTTAGCAATCCTGCCCAGACGCCgg < 1:1204394/150‑1 (MQ=21) aaCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTaa > 2:1772287/1‑150 (MQ=38) aaCTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTa > 1:411805/1‑112 (MQ=25) aaCTGACCCCGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTa < 2:411805/112‑1 (MQ=25) gACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGt < 2:763997/150‑1 (MQ=40) gACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGGCACCGATGTGGGCGTAATCACCTACACCGTGACCCTGAGAAATCCTGCCCAGACGCCGGTAACCGt < 1:43153/150‑1 (MQ=14) ccccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGa < 2:1449347/150‑1 (MQ=255) cccGAATCCGACCCCGGCTCAGACCACGCTCAACGCCTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc < 2:124127/150‑1 (MQ=255) cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGAc < 2:1655720/114‑1 (MQ=37) cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAc < 1:1736835/150‑1 (MQ=255) ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAAcc < 2:585318/144‑1 (MQ=38) ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGAcc > 2:1404067/1‑150 (MQ=255) cGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGcc < 1:1199406/128‑1 (MQ=18) cGAACCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGcc > 2:1199406/1‑128 (MQ=18) gAATCCGACCCCGGCTCAGACCACGACCAACGCCTCGGTCGATGCCACCTCTGCTGACCC‑GACGGCGAGCGCGACGGTCACCGAATGCGGCGTAATTACCTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGACCCt < 2:251617/150‑1 (MQ=14) tCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGta > 1:1820299/1‑149 (MQ=38) ccccGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACg < 1:1016996/150‑1 (MQ=38) ccGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCa > 2:865191/1‑119 (MQ=33) ccGGCTAAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCa < 1:865191/119‑1 (MQ=18) tCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCAc < 1:259889/84‑1 (MQ=35) aGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACGTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGtca > 2:1033186/1‑150 (MQ=38) aGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCt > 2:102893/1‑107 (MQ=32) gACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 1:910726/98‑1 (MQ=34) gACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa > 2:910726/1‑98 (MQ=33) cACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCAc > 2:1633583/1‑150 (MQ=255) aCGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACt < 2:360470/150‑1 (MQ=255) gATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCt < 1:1030642/90‑1 (MQ=35) gATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGt < 2:1208035/120‑1 (MQ=37) aTCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGtt < 1:164578/150‑1 (MQ=255) aaCGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGaa < 2:153949/150‑1 (MQ=255) gACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGcc > 1:1633831/1‑150 (MQ=255) cTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCgg < 1:1494573/150‑1 (MQ=255) tCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACAGTGACCCTGTCCAACGGCCAGGCCATCACCGTTGAAGCCGGc > 2:1238018/1‑150 (MQ=255) gTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACg < 1:1801613/121‑1 (MQ=35) tGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCa < 1:1890968/150‑1 (MQ=255) ccaccaCCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAgg < 2:256941/150‑1 (MQ=255) ccaccaCCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAgg < 2:270505/150‑1 (MQ=255) caccacCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCt < 1:338072/105‑1 (MQ=38) caccacCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCt > 2:338072/1‑105 (MQ=38) caccGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 1:382352/68‑1 (MQ=37) caccGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAg < 1:1238018/150‑1 (MQ=255) ccGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCg > 1:67069/1‑150 (MQ=255) cgc‑gACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGt > 2:1323580/1‑150 (MQ=255) cccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGAtt < 1:359915/150‑1 (MQ=255) ccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGAttt < 2:760546/150‑1 (MQ=255) cTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc < 2:67069/150‑1 (MQ=255) tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTcc > 1:792966/1‑150 (MQ=255) ccGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa > 1:1047957/1‑46 (MQ=40) ccGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGa < 2:1047957/46‑1 (MQ=40) ccGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAAt > 2:1191603/1‑51 (MQ=38) gTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCaa < 1:1404067/150‑1 (MQ=255) gTCACTGAAGGCGGCGTAAACATCTACACCGTGACCCTGAGCAATTCTGCCCAGACGCCGGTAACCGTGTCCCTGTCCACTTGCCAGGTCATCACTGGTGAAGCCGGCAATATCCATGGCAGCGTCGATTTCCAGACCCCGGCCAATGAc < 2:620274/150‑1 (MQ=14) gTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCg > 1:728351/1‑60 (MQ=38) aCCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTc > 1:237343/1‑150 (MQ=40) aCCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTc < 1:1162873/150‑1 (MQ=255) ccGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCt > 1:1333082/1‑150 (MQ=40) cGAAGGCGGCGTAATCACCTACACCGTGACCCTGAg < 1:763849/36‑1 (MQ=255) gcggcgTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTacaaca > 1:772873/1‑150 (MQ=40) ggcgTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACaacaac > 2:1760590/1‑150 (MQ=39) gcgTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACg > 1:1520330/1‑150 (MQ=38) cgTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGcc < 1:994809/130‑1 (MQ=40) gTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGt < 2:772873/150‑1 (MQ=38) | CCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGC‑GACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGT > NC_002947/197031‑197326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |