| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,102,795 | C→G | 7.3% | noncoding (35/76 nt) | PP_t21 → | tRNA‑Gly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,102,795 | 0 | C | G | 7.3% | 324.6 / 13.1 | 109 | noncoding (35/76 nt) | PP_t21 | tRNA‑Gly |
| Reads supporting (aligned to +/- strand): ref base C (45/56); new base G (5/3); total (50/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCTTCGTCTAGT > NC_002947/2102650‑2102944 | gggAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAg < 1:491367/150‑1 (MQ=255)gggAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGGCTAGTGGCCTAGGACACCGCTCTTTCACGGCGGTAACAGGGGTTGGAGTCCCCTAGGGGACGCGAACGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAg > 2:1262054/1‑150 (MQ=18) gAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGt < 2:711286/150‑1 (MQ=255) tGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCgg < 1:714338/150‑1 (MQ=255) gAAAGCAGGCAGTAATGCTAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGCGCACGTCCTTGCCAAGGTCggg < 2:169815/150‑1 (MQ=255) aaGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCGAGGTCgtgct < 2:242908/150‑5 (MQ=255) aaGCAGGCAGTAATGCCAGCAGCGTGTCCCCTGCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGt < 2:830889/150‑1 (MQ=255) caggcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTcgc < 2:1578603/150‑1 (MQ=255) ggcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGa < 1:520556/150‑1 (MQ=255) gcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAg > 2:808343/1‑150 (MQ=255) gcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGCGTCCCCTGCGGGACGGCCATGCGGGCATGGCTCAGCGGGGAGAGCACGCCCTTGCCAAGGGCGGGGTcgcggg > 1:132503/1‑148 (MQ=14) gTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGt > 1:490687/1‑141 (MQ=255) gTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGt < 2:490687/141‑1 (MQ=255) aaTGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGa < 2:1100910/150‑1 (MQ=255) ccAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGtct > 1:1090485/1‑150 (MQ=40) cagcagCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCGCCTAGGGGACGCCAATGCGGGAATAGCTCAGGTGGTAGAGCACGGCCTTGCCAAGGTCGGGGTCGCGAGGTCGGGtcgc > 1:766936/1‑148 (MQ=14) cagcagCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGtctc < 2:1716936/150‑1 (MQ=39) gcagcGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGt > 1:1685390/1‑150 (MQ=38) ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAg > 1:639077/1‑127 (MQ=34) ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAg < 2:639077/127‑1 (MQ=34) ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCa > 1:934849/1‑150 (MQ=33) cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAg > 2:1607986/1‑150 (MQ=33) tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTTCCAAGGTCGGGGTcgc > 2:924582/1‑116 (MQ=21) tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTTCCAAGGTCGGGGTcgc < 1:924582/116‑1 (MQ=21) tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTc > 1:1049892/1‑134 (MQ=33) tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTcc > 1:1125885/1‑150 (MQ=37) tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTcc < 2:1746565/150‑1 (MQ=37) gTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACACCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCgg > 1:547916/1‑150 (MQ=255) gCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCgtg > 1:1134561/1‑104 (MQ=255) gCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGGCAAGGTCgtg < 2:1134561/106‑3 (MQ=255) tAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCCATGCGGCACTCGCTGCGTTGGTGGAGCACGACCTTGCCAAGGTCGGGGTCGCGATGTTGAGTCTCGTTTCCCGCTCCATTTTCTCCGGCACTGc > 1:679761/1‑150 (MQ=14) acacCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAg < 2:934849/150‑1 (MQ=255) acacCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAg > 2:350028/1‑150 (MQ=255) acCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgcg > 2:1656316/1‑150 (MQ=255) cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgcggc < 1:925692/150‑1 (MQ=255) gCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgcggcg > 1:1257819/1‑150 (MQ=255) cccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGcggcgg < 1:1656316/150‑1 (MQ=255) cccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGcggcgg < 2:1090485/150‑1 (MQ=255) tttCACGGCGGTAACAGGGGTTCGAGTGCTCGAGGGGGCGCCAATGAGGGAATAGCTGTGATGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGATCGAGACTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGc > 2:547614/1‑150 (MQ=17) ttCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCa < 2:1257819/150‑1 (MQ=255) ttCACGGCGGTAACAGGGGTTCGAGTACCCTAGGGGCCGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCa < 2:1259473/150‑1 (MQ=255) tCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACTACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAg < 2:1579071/150‑1 (MQ=255) tCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGtctc < 2:81363/106‑1 (MQ=35) tCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGtctc > 1:81363/1‑106 (MQ=35) aCGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAg < 1:1591580/148‑1 (MQ=255) aCGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAg > 2:1591580/1‑148 (MQ=255) aCGGCGATAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGa < 2:1406783/99‑1 (MQ=25) aCGGCGATAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGa > 1:1406783/1‑99 (MQ=25) cggcggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGgaa > 1:893145/1‑150 (MQ=255) gcggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGgaaaa < 1:1607986/150‑1 (MQ=255) gTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGGAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTc > 1:39017/1‑91 (MQ=25) tAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGgaaaagaaa < 1:6080/150‑1 (MQ=255) ggTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTtctc < 2:575093/110‑1 (MQ=38) gAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGaa < 1:808343/150‑1 (MQ=255) gAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGaa > 2:926442/1‑150 (MQ=255) gTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGa < 1:962409/78‑1 (MQ=38) ccTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGa > 1:403525/1‑150 (MQ=255) ccTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGa > 2:1423033/1‑150 (MQ=255) ccTAGGGGACACCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGa < 2:547916/150‑1 (MQ=255) cTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAg < 2:403525/150‑1 (MQ=255) cTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCAGCTCAAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAg < 2:525335/150‑1 (MQ=255) ggggACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTATCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGtt < 1:935697/150‑1 (MQ=255) ggggACGCCAATGCGGGAATAGCTAAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCGCTTTTTCCGCTCTACTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGtt < 2:187431/150‑1 (MQ=25) gggACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTc < 1:926442/150‑1 (MQ=255) gggACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTc < 1:1399719/150‑1 (MQ=255) gACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCa < 2:284357/115‑1 (MQ=255) gACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCa > 1:284357/1‑115 (MQ=255) gCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAg < 2:1086778/141‑1 (MQ=255) gCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAg > 1:1086778/1‑141 (MQ=255) gCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGtt > 1:1190229/1‑150 (MQ=255) gCCAATGCGGGAATAGCTCAGTTGGGAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTGTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGtt > 2:1007099/1‑150 (MQ=255) cAATGCGGGAATAGCTCCGTTGGTAGAGCACGACCTTGCCCAGGTCGGCGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCCGGAAAAGACAACCCCGGCTGAATCGTGAGGTTCGTGTTCt > 1:781794/1‑150 (MQ=21) cAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTc > 2:889272/1‑72 (MQ=31) cAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTc < 1:889272/72‑1 (MQ=31) aaTGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTg < 2:1190229/150‑1 (MQ=255) aaTGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTg < 1:1317825/150‑1 (MQ=255) gAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACt > 1:678364/1‑150 (MQ=255) aaTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTCCTGGt > 2:1847583/1‑144 (MQ=255) aaTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTCCTGGt < 1:1847583/144‑1 (MQ=255) gCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGaaaa < 2:1669521/150‑1 (MQ=255) tCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAgt > 2:903080/1‑150 (MQ=255) tCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAgt > 2:1144179/1‑150 (MQ=255) tGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAAGCGTGAGGTTCATGTTCTGGTGCACTGAAAAGtgttgt < 2:893145/150‑1 (MQ=255) gTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTtgtgt < 1:1144179/150‑1 (MQ=255) gagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgc > 2:533895/1‑76 (MQ=255) gagCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgc < 1:533895/76‑1 (MQ=255) accccGACCTTGGCAAGGTCGTGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTcc > 1:333907/5‑150 (MQ=255) gCACGACCTTGCCAAGGTCGGGGAGACCAGTACGAGGCTGGGTTGCCACAGCGGTTTCGCCGGCGCTGAGTAGCGGGTGGGCGGGGAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTccc > 2:288131/1‑150 (MQ=255) cccGACCTTGGCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgcggcg < 1:1733248/75‑1 (MQ=255) cccGACCTTGGCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAgcggcg > 2:1733248/3‑77 (MQ=255) cGACCTTGGCAAGGTCGTGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCtt > 1:910667/1‑150 (MQ=255) ccTTGGCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGcggcgg > 2:1544771/1‑73 (MQ=255) ccTTGGCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGcggcgg < 1:1544771/73‑1 (MQ=255) cTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGTGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTc > 1:1570565/1‑109 (MQ=255) cTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTc < 2:1570565/109‑1 (MQ=255) ttGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCTTCGTCt > 2:914974/1‑150 (MQ=255) gCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCAc > 2:736102/1‑120 (MQ=255) gCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCAc < 1:736102/120‑1 (MQ=255) gCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCTTCGTCTAg < 2:1119995/150‑1 (MQ=255) ccAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCTTCGTCTAGt < 1:350028/150‑1 (MQ=255) | GGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTCTCCGGCACTGCTTAGCGGCGGGGCAGGAAAAGAAAACCCAGGCTGAATCGTGAGGTTCATGTTCTGGTGCACTGAAAAGTGTTGTGTGTCCCCTTCGTCTAGT > NC_002947/2102650‑2102944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |