| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,109,915 | A→G | 7.7% | W1472R (TGG→CGG) ‡ | PP_1882 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,109,915 | 0 | A | G | 7.7% | 208.5 / 7.1 | 78 | W1472R (TGG→CGG) ‡ | PP_1882 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (41/31); new base G (3/3); total (44/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.46e-02 | |||||||||||
TGGAGCGCCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAGCTATTCAG > NC_002947/2109767‑2110062 | tGGAGCGCCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAg < 1:657178/150‑1 (MQ=255) aGCGCCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCa < 2:365421/150‑1 (MQ=255) gcgcCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAg < 1:1705729/150‑1 (MQ=255) gcgcCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAg < 2:1210973/150‑1 (MQ=255) ccGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCcg > 2:234230/1‑150 (MQ=255) ccGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCcg > 1:1188228/1‑150 (MQ=255) tACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCTGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGa < 2:984929/150‑1 (MQ=255) tACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCGCCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGa < 2:1706593/150‑1 (MQ=255) tgacAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGgcgc > 2:1126161/1‑150 (MQ=255) acAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGgcgccg > 2:924458/1‑148 (MQ=255) acAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAg > 1:203836/1‑150 (MQ=255) cGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATTCTCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTAc < 1:593674/150‑1 (MQ=255) cGTGGCTGTAGCCACAGCGGAATACCAGTTGTTGCTGATTGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCACGCAGCCGCGATTGCCGGCGCAGCTAc < 2:959063/150‑1 (MQ=255) tGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGc > 1:394447/1‑150 (MQ=255) gTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCCCAGCTACGCCACCt < 1:1004976/150‑1 (MQ=255) tAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTg > 1:1103027/1‑150 (MQ=255) ggcagccGCGGCCGCCAATTTGATGCCGACGGCGAGCGAGACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGt < 2:447067/145‑1 (MQ=255) gCCACCGCGGCCGCCACCTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTc < 1:1265734/150‑1 (MQ=255) ccACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTca > 1:950571/1‑150 (MQ=255) ccACCGCGGCCGCCAACTTGATGCCGACGGCGAGCCATACGCTGGCAATTGCCCCGCCACCTGCCCAAAGTGCCGCACCCGCGCCACTGATGCCACCACCCGCCGCACCCCAGCCAGCCGAGATTAACGGCGCAAATACGACATATGTca > 2:871470/1‑150 (MQ=255) aCCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTcacc > 2:482701/1‑150 (MQ=255) ccgccAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCAACAcggcgg > 2:764249/1‑150 (MQ=255) cgccAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGAcggg > 1:1843803/1‑149 (MQ=255) ccAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGAcggcgg > 2:1344446/1‑150 (MQ=255) cTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCAc < 1:1126161/150‑1 (MQ=255) cTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCAACGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCACCTACGCCACCTGTCACCACGACCGCGGCCAc > 2:1365429/1‑150 (MQ=255) ttGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACg > 1:1423228/1‑150 (MQ=255) tGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGACACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAgg > 1:124253/1‑150 (MQ=255) cGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc < 1:1665215/97‑1 (MQ=255) cGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc > 2:1665215/1‑97 (MQ=255) cGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCaa > 1:1113931/1‑150 (MQ=255) gagcgaTACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc > 2:1629850/1‑90 (MQ=255) gagcgaTACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc < 1:1629850/90‑1 (MQ=255) gagcgaTACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTgcggc < 2:1062809/150‑1 (MQ=255) cgaTACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGaa < 1:234230/150‑1 (MQ=255) aTACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAaga > 2:1430652/1‑150 (MQ=255) aCGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCCCGGAGGCAACTGCGGCGAAGAGt < 2:950571/150‑1 (MQ=255) aaTTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAg > 2:1652082/1‑150 (MQ=255) aaTTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAg > 2:1077916/1‑150 (MQ=255) ttGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGc < 2:1423228/150‑1 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAg > 1:859709/1‑65 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAg < 2:859709/65‑1 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATg < 2:1688422/139‑1 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATg > 1:1688422/1‑139 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTAt > 1:336640/1‑150 (MQ=255) cccGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTAt > 1:310995/1‑150 (MQ=255) cGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATcc > 1:1761118/1‑150 (MQ=255) acCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCa > 2:565467/1‑54 (MQ=255) acCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCa < 1:565467/54‑1 (MQ=255) acCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGt > 2:195760/1‑150 (MQ=255) ccTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTc < 2:1103027/150‑1 (MQ=255) tGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCGGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCACCTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCa > 2:851609/1‑150 (MQ=255) gAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc > 2:1321525/1‑56 (MQ=38) gAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCTGGGCAGCcgc < 1:1321525/56‑1 (MQ=38) ctgggCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGc > 2:1085346/5‑150 (MQ=255) cGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCAcc > 2:350924/1‑150 (MQ=255) gCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCt > 1:1073482/1‑150 (MQ=255) cccGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAg < 1:1085346/150‑1 (MQ=255) ccGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGACACGGAGGACACTACGGGGAATAGTAGGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAgg > 1:1870447/1‑150 (MQ=255) cgcCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAACCGATCGCACCTAAGGCCt < 2:1352541/150‑1 (MQ=255) aCTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGcc > 2:1440441/1‑150 (MQ=255) aCTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGcc > 1:1630668/1‑150 (MQ=255) cTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTgcg < 2:116966/93‑1 (MQ=255) cTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTgcg > 1:116966/1‑93 (MQ=255) tGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGcccc < 1:337180/150‑1 (MQ=255) ccgccACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGc < 1:170967/142‑1 (MQ=255) ccgccACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGc > 2:170967/1‑142 (MQ=255) cgccACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGa > 2:480572/1‑150 (MQ=255) gccACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGAt < 2:1761118/150‑1 (MQ=255) cACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGa > 1:1396929/1‑147 (MQ=255) cACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGa < 2:1396929/147‑1 (MQ=255) ccGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTg < 1:481203/150‑1 (MQ=255) ggcggcTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTa < 1:1430652/150‑1 (MQ=255) ggcggcTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTa < 1:1656757/150‑1 (MQ=255) gcggcTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAg > 2:1408412/1‑150 (MQ=255) ggcTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGcc > 1:1252006/1‑111 (MQ=255) ggcTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGcc < 2:1252006/111‑1 (MQ=255) cTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAGCTAt < 2:1073482/150‑1 (MQ=255) ccAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCGCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAGCTATTCAg > 1:1530187/1‑150 (MQ=255) ccAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAGCTATTCAg > 2:77183/1‑150 (MQ=255) | TGGAGCGCCGTACCGGTGACTGACAACGTGGCTGTAGCCACCGCGGCCGCCAACTTGATGCCGACGGCGAGCGATACGCTGGCAATTGCCCCGACACCTGCCGAAAGTGCCGCACCCGCGCCACTGATGCCGCCACCGGCGGCTGCCCAGGCAGCCGCGATTGCCGGCGCAGCTACGCCACCTGTCACCACGACGGCGGCCACGGAGGCAACTGCGGCGAAGAGTATGCCCAGGCCTATCCCCGTCCAGCCGATCGCACCTAAGGCCTTGCCCCGCCAGATGCTGTAGCTATTCAG > NC_002947/2109767‑2110062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |