Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,171,711 G→A 5.6% intergenic (+203/+200) PP_5484 → / ← PP_1924 hypothetical protein/phosphinothricin N‑acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,171,7110GA 5.6% 238.7 / 2.2 82intergenic (+203/+200)PP_5484/PP_1924hypothetical protein/phosphinothricin N‑acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (44/33);  new base A (3/2);  total (47/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTGGGGGTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAG  >  NC_002947/2171562‑2171853
                                                                                                                                                     |                                                                                                                                               
aGTGGGGGTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCACAACTTGGCTACCATCCTCTGTCGACGGCtgg                                                                                                                                                 >  2:1546329/1‑150 (MQ=255)
 gTGGGGGTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCtggt                                                                                                                                                <  1:689572/150‑1 (MQ=255)
  tGGGGGTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCACCAGCTGTCGACAGCtgatg                                                                                                                                               <  1:1828873/150‑1 (MQ=255)
   gggggTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGACACAGCTTGCTAGTCCCACTTGGCTACCATCAGCTGTCGACAGCtggtgg                                                                                                                                              <  1:831735/150‑1 (MQ=255)
       gTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTAcc                                                                                                                                          <  1:1138036/150‑1 (MQ=255)
          gggCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGt                                                                                                                                       <  2:899659/150‑1 (MQ=255)
             cGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGa                                                                                                                                    <  1:1830618/150‑1 (MQ=255)
             cGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGa                                                                                                                                    <  1:391979/150‑1 (MQ=255)
                  tAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTa                                                                                                                               >  1:756611/1‑150 (MQ=255)
                            ccGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTTGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAgg                                                                                                                    >  2:153127/1‑150 (MQ=255)
                            ccGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAgg                                                                                                                    <  1:153127/150‑1 (MQ=255)
                                ttACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGtt                                                                                                                <  2:837270/150‑1 (MQ=255)
                                          tttATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGACGACAGCTGTCGCGCCGAGACGGCTGGCTATCCCCACTTGGGTACGATCAGCTGGCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGGTTGGGGTAAgg                                                                                                      >  2:1683024/1‑150 (MQ=255)
                                              tGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACg                                                                                                  >  1:439274/1‑150 (MQ=255)
                                               gTCAGCAACACCAAGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACCGACGGCTATCCCGCGACATCGTCCATCAGCGGGCGACTGCCGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACgg                                                                                                 <  1:704542/150‑1 (MQ=255)
                                                  aGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGccc                                                                                              >  2:1683780/1‑150 (MQ=255)
                                                   gCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGcccc                                                                                             <  2:1276247/150‑1 (MQ=255)
                                                        acCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGTTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCaa                                                                                        >  2:829293/1‑150 (MQ=255)
                                                          ccGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTaa                                                                                                                              <  1:138799/111‑1 (MQ=255)
                                                          ccGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTaa                                                                                                                              >  2:138799/1‑111 (MQ=255)
                                                          ccGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCCGGCGTTTGCGGTAAGGGACGGCCCCCCCAAAc                                                                                      <  2:1071603/150‑1 (MQ=255)
                                                           cGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAAcc                                                                                     >  1:1118217/1‑150 (MQ=255)
                                                           cGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAAcc                                                                                     >  1:1118195/1‑150 (MQ=255)
                                                                  aGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCa                                                                              <  2:972548/150‑1 (MQ=255)
                                                                   gCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGGAAGGGACGGCCCCCCCAAACCGGCTGCAt                                                                             >  1:946036/1‑150 (MQ=255)
                                                                      tCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACGGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAgc                                                                          <  2:1535188/150‑1 (MQ=255)
                                                                      tCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAgc                                                                          <  2:464347/150‑1 (MQ=255)
                                                                      tCGCCAGGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACCGCCCCCCCAAACCGGCTGCATAgc                                                                          <  2:1283655/150‑1 (MQ=255)
                                                                         ccATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCTCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGATGACGGTGACATGGTGTGTAGATCTGGTAAGGGACGGCCCCCCCAAACCGACTACATAGCGCa                                                                       >  2:49640/1‑150 (MQ=255)
                                                                         ccATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCGATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCa                                                                       >  1:627772/1‑150 (MQ=255)
                                                                           aTGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTaa                                                                                                        >  1:648472/1‑115 (MQ=255)
                                                                           aTGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTaa                                                                                                        <  2:648472/115‑1 (MQ=255)
                                                                              cAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAg                                                                  <  2:381631/150‑1 (MQ=255)
                                                                              cAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTGGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAg                                                                  <  1:530822/150‑1 (MQ=255)
                                                                               aaTAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGTTACAGCCAGTCTGTATTAAACCAGATCCTTGCGGTAAGGGACGGCCCCCCCAAACCAGCTGCATAGCGCGTCCAgg                                                                 >  1:1663696/1‑150 (MQ=255)
                                                                                 tAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGGCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGt                                                               >  2:124219/1‑150 (MQ=255)
                                                                                  aGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGtt                                                              >  1:321673/1‑150 (MQ=255)
                                                                                  aGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGtt                                                              >  1:321139/1‑150 (MQ=255)
                                                                                    ccGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtgg                                                            >  1:664754/1‑150 (MQ=255)
                                                                                     cGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtggt                                                           <  2:1118217/150‑1 (MQ=255)
                                                                                     cGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtggt                                                           <  2:1118195/150‑1 (MQ=255)
                                                                                      gACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGCGAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtggtg                                                          >  1:1550468/1‑150 (MQ=255)
                                                                                             ctcCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAgcc                                                   <  2:956579/150‑1 (MQ=255)
                                                                                              tcCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAATGATCGGCCCCCCCAAACCGGCTGCATGGCGCATCCAGGGTTGGTGGTTAgccc                                                  >  1:214923/1‑149 (MQ=255)
                                                                                              tcCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAgccg                                                  >  1:1722105/1‑150 (MQ=255)
                                                                                                ccgccgAGACGGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCg                                                                                                            <  2:1287160/90‑1 (MQ=255)
                                                                                                ccgccgAGACGGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCg                                                                                                            >  1:1287160/1‑90 (MQ=255)
                                                                                                   ccgAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTggtggt                                                        >  1:1797050/1‑139 (MQ=255)
                                                                                                   ccgAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTggtggt                                                        <  2:1797050/139‑1 (MQ=255)
                                                                                                     gagaCAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCACCCAGGGTTGGTGGTTAGCCGccccccc                                           >  2:144778/1‑150 (MQ=255)
                                                                                                        aCAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATc                                        >  1:367520/1‑150 (MQ=255)
                                                                                                           gCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAgc                                                                          >  2:1403315/1‑113 (MQ=255)
                                                                                                           gCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAgc                                                                          <  1:1403315/113‑1 (MQ=255)
                                                                                                           gCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACg                                     <  2:1722105/150‑1 (MQ=255)
                                                                                                             tGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACggg                                   >  2:718701/1‑150 (MQ=255)
                                                                                                                  aTCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGCCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCt                              >  2:864826/1‑150 (MQ=255)
                                                                                                                    ccccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCttt                            <  1:296526/150‑1 (MQ=255)
                                                                                                                    ccccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCttt                            >  1:507687/1‑150 (MQ=255)
                                                                                                                     cccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAg                                                                                                                     >  1:194835/1‑60 (MQ=255)
                                                                                                                     cccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAg                                                                                                                     <  2:194835/60‑1 (MQ=255)
                                                                                                                     cccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTg                           >  1:315247/1‑150 (MQ=255)
                                                                                                                     cccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTg                           >  1:1407524/1‑150 (MQ=255)
                                                                                                                      ccACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTgg                          >  2:1650015/1‑150 (MQ=255)
                                                                                                                        aCTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGt                        >  1:1548531/1‑150 (MQ=255)
                                                                                                                           tGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGa                     <  1:1163357/150‑1 (MQ=255)
                                                                                                                             gCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGAtt                   >  2:147593/1‑150 (MQ=255)
                                                                                                                             gCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGAtt                   <  2:340353/150‑1 (MQ=255)
                                                                                                                              cTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTgg                          >  1:525508/1‑142 (MQ=255)
                                                                                                                              cTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTgg                          <  2:525508/142‑1 (MQ=255)
                                                                                                                                aCCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCa                >  1:1745727/1‑150 (MQ=255)
                                                                                                                                 ccATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGACGATTGCAg               >  1:1226314/1‑150 (MQ=255)
                                                                                                                                  caccAGCTGTCGACAGCTGATGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAg               >  1:651972/4‑149 (MQ=255)
                                                                                                                                  caccAGCTGTCGACAGCTGATGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAg               <  2:651972/146‑1 (MQ=255)
                                                                                                                                  cATCAGCTGACGACCCCTGACTGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGc              >  2:465089/1‑150 (MQ=255)
                                                                                                                                   aTCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCaaa                                                                                       <  1:737865/76‑1 (MQ=255)
                                                                                                                                   aTCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCaaa                                                                                       >  2:737865/1‑76 (MQ=255)
                                                                                                                                   aTCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGcc             >  1:1286222/1‑150 (MQ=255)
                                                                                                                                   aTCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCATTGGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGcc             >  1:1788005/1‑150 (MQ=255)
                                                                                                                                     cAGCTGTCGACAGCTGATGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTa                                                      <  1:1424328/107‑1 (MQ=255)
                                                                                                                                     cAGCTGTCGACAGCTGATGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTa                                                      >  2:1424328/1‑107 (MQ=255)
                                                                                                                                        cTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtgg                                                            >  2:1270442/1‑98 (MQ=255)
                                                                                                                                        cTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTtgg                                                            <  1:1270442/98‑1 (MQ=255)
                                                                                                                                        cTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCa        >  2:1744371/1‑150 (MQ=255)
                                                                                                                                              aCAGGTGGTGGTACCGGTTGACCGTTACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAg  <  2:946036/150‑1 (MQ=255)
                                                                                                                                              aCAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAg  <  1:718701/150‑1 (MQ=255)
                                                                                                                                              aCAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCCTTGGGTCGATTGCAGCCGGTCACGACAg  >  2:1087737/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
AGTGGGGGTAGGGCGGGGTAACGACGTGCCGGTTACGTGCTCTTTATGTCAGCAACACCCGGATTGAGCGTCGCCATGCAATAGCCGACAGCTCTCCCGCCGAGACAGCTGGCTATCCCCACTTGGCTACCATCAGCTGTCGACAGCTGGTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAG  >  NC_002947/2171562‑2171853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: