| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,209,822 | T→C | 5.6% | V8V (GTT→GTC) | PP_1953 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,209,822 | 0 | T | C | 5.6% | 209.8 / 2.0 | 72 | V8V (GTT→GTC) | PP_1953 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (37/30); new base C (2/2); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.80e-01 | |||||||||||
TAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATCCCTAC > NC_002947/2209673‑2209968 | tAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGtt < 1:590209/150‑1 (MQ=255)tAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGtt < 1:133126/150‑1 (MQ=255)tAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGtt < 1:1521610/150‑1 (MQ=255) aaaCCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTtgt < 2:685732/150‑1 (MQ=255) ttAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTcaca > 1:365846/1‑150 (MQ=255) ttAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTAAACTACCCGAGGCAGGATATACCGAACGCTAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTcaca > 1:1672942/1‑150 (MQ=255) aTAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCa < 2:1130737/150‑1 (MQ=255) cGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCt < 1:1784020/150‑1 (MQ=255) cGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCt < 1:1784452/150‑1 (MQ=255) gAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTg < 1:302202/150‑1 (MQ=255) gTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCg < 2:276683/150‑1 (MQ=255) gTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCg > 2:84005/1‑150 (MQ=255) tAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCgg > 2:16104/1‑150 (MQ=255) tttCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGaca > 1:1194920/1‑150 (MQ=255) taCTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAgct > 1:408913/1‑150 (MQ=255) cTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAgctgc < 2:142476/150‑1 (MQ=255) tGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAgctgct > 2:1884793/1‑150 (MQ=255) gAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAg > 2:1635956/1‑150 (MQ=255) gTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATNCTCGNCCATAAGAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCACCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTg > 1:326725/1‑150 (MQ=255) gTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTTTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTg < 1:591464/150‑1 (MQ=255) aCAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTCGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGa > 2:321145/1‑150 (MQ=255) aGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGc > 2:1833324/1‑150 (MQ=255) tGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAg < 2:365846/150‑1 (MQ=255) gAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGCGAGGTGGTGGCATCTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAgg < 2:1033950/150‑1 (MQ=255) gAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAgg < 1:1884793/150‑1 (MQ=255) cGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGTAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAt < 1:1598167/150‑1 (MQ=255) ggAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTCGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAtg > 1:52839/1‑150 (MQ=255) gAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAtgt < 2:275654/150‑1 (MQ=255) aaTATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGACAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAtgtg > 2:1880340/1‑150 (MQ=255) ataCCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAATCAATCGCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGtt < 1:1060812/150‑1 (MQ=255) cGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCa < 2:136755/150‑1 (MQ=255) cGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCa > 1:275882/1‑150 (MQ=255) cGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACACCTGCTAGTGGAGCAGGGCGCCCAAGTGGTTGCCa > 2:238980/1‑150 (MQ=255) gAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTGGTGCTCACAGCCGTAGCGTCTGTCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCAt > 1:895396/1‑150 (MQ=255) cagcCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTaa < 2:420051/150‑1 (MQ=255) ccAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTg > 1:1335531/1‑80 (MQ=255) ccAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTg < 2:1335531/80‑1 (MQ=255) ccAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGCTCTTAAAAg > 2:779919/1‑150 (MQ=255) aaaTGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTca > 1:573281/1‑63 (MQ=255) aaaTGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTca < 2:573281/63‑1 (MQ=255) aaTGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTCGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGa < 1:321145/150‑1 (MQ=255) tGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACt > 1:21582/1‑150 (MQ=255) tCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTAACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGc > 1:338909/1‑150 (MQ=255) cccATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGAAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTc > 1:872586/1‑150 (MQ=255) cAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCt < 2:274621/61‑1 (MQ=255) cAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCt > 1:274621/1‑61 (MQ=255) aaGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCa > 1:1881691/1‑150 (MQ=255) gagagGAGGTGGAATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCAtt > 2:1419517/1‑150 (MQ=255) agGTGGTGGCATGTCTTTTCAAAACAAAATCGTCGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCgg < 2:52839/150‑1 (MQ=255) tggtggCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAg < 1:551262/150‑1 (MQ=255) tggCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTga > 1:452583/1‑150 (MQ=255) tggCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGGGGAGCAGGGCGCCCATGTGGTTGCCATGGACCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTga > 1:797201/1‑150 (MQ=255) ggCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTgag < 1:368217/150‑1 (MQ=255) gCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTgagg > 2:1355404/1‑150 (MQ=255) gCATGACTTTTATCAATAAAATCGTTGTGCTCACTGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCACATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTgagg < 2:987727/150‑1 (MQ=255) cATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTgagga < 1:1826972/150‑1 (MQ=255) aTGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAtg > 2:1565753/1‑94 (MQ=255) aTGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAtg < 1:1565753/94‑1 (MQ=255) aTGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTgaggag > 1:556046/1‑150 (MQ=255) cTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACg > 1:64052/1‑150 (MQ=255) ttttCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTcaac > 2:119/1‑125 (MQ=255) ttttCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGt > 2:1097297/1‑150 (MQ=255) ttgtCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTcaac < 1:119/122‑1 (MQ=255) tttCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGtt > 1:810285/1‑150 (MQ=255) tCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCt < 2:1881691/150‑1 (MQ=255) aaaacaaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTNtgt < 2:1194920/150‑1 (MQ=255) aaaacaaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGAAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCtgt < 2:130057/150‑1 (MQ=255) aaacaaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCtgtg > 1:321953/1‑150 (MQ=255) aaacaaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCtgtg > 2:487302/1‑150 (MQ=255) aacaaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGc > 1:551499/1‑150 (MQ=255) caaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCAt < 2:21582/150‑1 (MQ=255) aaaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATc > 1:1190034/1‑150 (MQ=255) aaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATcc < 2:895396/150‑1 (MQ=255) aaaTCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATcc > 1:1049711/1‑150 (MQ=255) tCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATCCCTa > 1:339851/1‑150 (MQ=255) cGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATCCCTAc < 2:556046/150‑1 (MQ=255) ttGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAt < 1:1570560/71‑1 (MQ=255) ttGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCAt > 2:1570560/1‑71 (MQ=255) | TAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGAGCAGCCAAATGCTCGCCCATAACAAGAGAGGTGGTGGCATGTCTTTTCAAAACAAAATCGTTGTGCTCACAGGCGCAGCTTCTGGCATCGGCAAAGCGACAGCACAGCTGCTAGTGGAGCAGGGCGCCCATGTGGTTGCCATGGATCTTAAAAGCGACTTGCTTCAACAAGCATTCGGCAGTGAGGAGCACGTTCTGTGCATCCCTAC > NC_002947/2209673‑2209968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |