| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,281,675 | G→C | 5.6% | G152R (GGC→CGC) ‡ | PP_2009 → | 1‑aminocyclopropane‑1‑carboxylate deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,281,675 | 0 | G | C | 5.6% | 278.6 / 7.1 | 89 | G152R (GGC→CGC) ‡ | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
| Reads supporting (aligned to +/- strand): ref base G (37/47); new base C (3/2); total (40/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01 | |||||||||||
TGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATGGC > NC_002947/2281529‑2281821 | tGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCt > 2:1600939/1‑150 (MQ=255) aGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTgcg < 2:733878/150‑1 (MQ=255) aGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTgcg < 1:1397763/150‑1 (MQ=255) gcgcTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCa < 1:1046054/150‑1 (MQ=255) cTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTAGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGCCCTGCGCAccg < 2:1314239/150‑3 (MQ=255) tGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGa < 2:1570406/150‑1 (MQ=255) cATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCAt < 1:153531/150‑1 (MQ=255) aTGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATg < 1:1741207/150‑1 (MQ=255) aTGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGATCATTTGGGCGCAGGGCTGCGCACTGATCATg < 1:527583/150‑1 (MQ=255) tGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgc < 2:976740/150‑1 (MQ=255) aaCTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgcagc < 2:1810324/150‑1 (MQ=255) aaCTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgcagc > 1:1814877/1‑150 (MQ=255) aCTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGTGTGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgcagca > 1:1554971/1‑150 (MQ=255) cTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGcagcag < 2:1526949/150‑1 (MQ=255) tGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCt < 1:203910/129‑1 (MQ=255) tGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCt > 2:203910/1‑129 (MQ=255) gCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgc > 2:95801/1‑150 (MQ=255) gCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgc > 2:702521/1‑150 (MQ=255) aTTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgcgc < 1:141035/150‑1 (MQ=255) aTTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgcgc < 1:743863/150‑1 (MQ=255) aTTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgcgc < 1:1786732/150‑1 (MQ=255) ttGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgcgcg > 1:1729464/1‑150 (MQ=255) taggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGgcgcgcgcgc > 2:524073/1‑150 (MQ=255) aggctaCGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCa < 2:548172/150‑1 (MQ=255) ggcggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATcgcg < 1:1541929/150‑1 (MQ=255) ggcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGa > 1:15838/1‑150 (MQ=255) gcTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGAt < 1:1517762/150‑1 (MQ=255) cTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgca < 1:1886898/123‑1 (MQ=255) cTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgca > 2:1886898/1‑123 (MQ=255) cTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGAtt < 1:1099631/150‑1 (MQ=255) aCCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTgg > 2:335529/1‑150 (MQ=255) aCCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTgg < 2:895527/150‑1 (MQ=255) cGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGc > 1:1913868/1‑150 (MQ=255) aCGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGGTTGGGCTGGtt > 1:75115/1‑149 (MQ=255) gCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCTGGATTGGGCTGGTCAg > 2:900692/1‑150 (MQ=255) cAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGa < 1:415136/150‑1 (MQ=255) cAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGa < 1:1619754/150‑1 (MQ=255) aaCGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGAc < 1:914422/150‑1 (MQ=255) aCCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGa > 2:160559/1‑150 (MQ=255) aCCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGAGGCGGTCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGa > 2:457429/1‑150 (MQ=255) ttCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCtgg < 2:1729464/150‑1 (MQ=255) tGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCtggtgg < 1:156969/150‑1 (MQ=255) gggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggc > 2:1781872/1‑150 (MQ=255) gggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggc < 1:335529/150‑1 (MQ=255) ggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCgg < 2:938761/116‑1 (MQ=255) ggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCgg > 1:938761/1‑116 (MQ=255) ggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGc < 1:103021/124‑1 (MQ=255) ggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGc > 2:103021/1‑124 (MQ=255) ggAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggct < 2:1432461/150‑1 (MQ=255) gAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggctg < 1:83073/150‑1 (MQ=255) aaCCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggctgg < 1:1689172/150‑1 (MQ=255) cTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCt < 2:1348740/72‑1 (MQ=255) cTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCt > 1:1348740/1‑72 (MQ=255) cTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACAATGACGCCTGGTGgctggctg > 1:1036724/1‑150 (MQ=255) ttGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTggctggcttc < 1:1600939/150‑3 (MQ=255) gCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCgg > 2:1772951/1‑150 (MQ=255) aaGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgca < 2:1543299/82‑1 (MQ=255) aaGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATgca > 1:1543299/1‑82 (MQ=255) gcgcTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGt < 2:40563/113‑1 (MQ=255) gcgcTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGt > 1:40563/1‑113 (MQ=255) gcgcTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACggg < 1:702521/150‑1 (MQ=255) gcgcTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACggg < 1:503075/150‑1 (MQ=255) tATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGAc > 2:1108415/1‑114 (MQ=255) tATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGAc < 1:1108415/114‑1 (MQ=255) aTCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTa < 1:67027/150‑1 (MQ=255) aTCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGCGGACTa > 1:623591/1‑150 (MQ=255) tCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGGACGGGGACTAc > 2:773970/1‑150 (MQ=255) aGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCtt > 1:761469/1‑150 (MQ=255) aGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCtt > 2:671940/1‑150 (MQ=255) aGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGAACACAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCtt > 1:1368988/1‑150 (MQ=255) ggCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCtcg > 2:1684121/1‑148 (MQ=255) ggCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTg < 2:15838/150‑1 (MQ=255) aCTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTggccggcc > 2:936727/1‑150 (MQ=255) cTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCt > 2:462472/1‑150 (MQ=255) tGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCtt > 2:1638086/1‑150 (MQ=255) tGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCtt < 1:95801/150‑1 (MQ=255) tCCCCTAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGCCGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTAc < 2:162930/150‑1 (MQ=255) cccGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTg > 2:1083489/1‑150 (MQ=255) cccGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGCCCTGCGCAcc < 1:1885284/44‑2 (MQ=25) cccGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGCCCTGCGCAcc > 2:1885284/1‑43 (MQ=25) ccGAAGGGGGCGGCGGGCTTGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGACGGAACGGGGACTACCTTGGCCGGCCTTGTACTgg < 1:385985/150‑1 (MQ=255) cGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggctgg > 1:1693341/1‑110 (MQ=255) cGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGtggctgg < 2:1693341/110‑1 (MQ=255) gcggcgGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCgg < 1:1708370/150‑1 (MQ=255) ggTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTg > 1:1164313/1‑150 (MQ=255) gTGCGCAGCCCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGc > 2:659295/1‑150 (MQ=255) gTGCGCAGCCCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGc > 2:1466766/1‑150 (MQ=255) cAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATGgc < 1:160559/150‑1 (MQ=255) cAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATGgc < 1:457429/150‑1 (MQ=255) | TGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATCATGCAGCAGGCGCGCGCGCAGATCGCGGGATTGGGCTGGTCAGACCATGACGCCTGGTGGCTGGCTGCCGGAACGGGGACTACCTTGGCCGGCCTTGTACTGGCCGAGGCGGGTGCACATGCCGTGCATGGC > NC_002947/2281529‑2281821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |