| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,412,920 | G→C | 6.2% | intergenic (+141/‑280) | rlmM → / → PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,412,920 | 0 | G | C | 6.2% | 245.4 / 6.4 | 81 | intergenic (+141/‑280) | rlmM/PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Reads supporting (aligned to +/- strand): ref base G (41/35); new base C (2/3); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
CCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACA > NC_002947/2412771‑2413068 | ccACGCTCGGTCCAGCACGTCGGTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATg‑g < 2:105762/150‑1 (MQ=255) cttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaacgctgcgctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAAGGGAGGTGACGGGCATG‑GAt < 2:420954‑M1/31‑1 (MQ=255) aCGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GAt > 1:193107/1‑150 (MQ=255) tGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGccc < 1:1276619/150‑1 (MQ=255) aGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATC‑CATGCCCGt < 2:630794/150‑1 (MQ=255) ggCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATC‑CATGCCCGTc < 1:258600/150‑1 (MQ=255) ccAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATC‑CATGCCCGTCac < 1:825153/150‑2 (MQ=255) ggCACGTCGTTCTGCGTGTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCGGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGGAGGGCGTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAgc < 2:330268/149‑1 (MQ=18) tcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAg < 1:1884843/150‑1 (MQ=255) tcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGATTCTAAAAGCACAAGAGTTCAGGCGGCGGTGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAg > 1:1178824/1‑150 (MQ=18) ctgcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGcccc > 1:166312/1‑150 (MQ=255) tgcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCa > 1:808896/1‑150 (MQ=255) gcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCat > 2:499598/1‑150 (MQ=255) ttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCatgg > 2:821505/1‑150 (MQ=255) tgcgtctgcgtcTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTCCAGCCGGCCCAGACTTCGTGGTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCatggatg < 1:224640/150‑1 (MQ=17) gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCatggatgg < 1:1432805/150‑1 (MQ=255) cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATggg < 1:1497925/150‑1 (MQ=255) tttttgtcaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGcc < 1:1842503‑M1/63‑1 (MQ=255) gtctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATgggg < 1:60247/150‑1 (MQ=255) gtctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTCGCTAAGGGAGGGGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATgggg < 1:706639/150‑1 (MQ=255) tctncgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGc > 2:1193827/1‑150 (MQ=255) ctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGcc > 2:1481045/1‑150 (MQ=255) ctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATCCATGGGGcc < 2:193107/150‑1 (MQ=255) tgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCt < 2:1493230/150‑1 (MQ=255) tgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCt < 1:275846/150‑1 (MQ=255) gtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGAAAGACATG‑CGGTTATTCGCTGAGGCCCCATGGATGGGGCCTGCa > 2:1096767/1‑150 (MQ=14) cttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGcgcg > 1:1371697/1‑150 (MQ=255) tgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGccc > 2:1488082/1‑107 (MQ=255) tgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGccc < 1:1488082/107‑1 (MQ=255) gcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTc > 2:1309780/1‑150 (MQ=255) cttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTcc > 1:1827742/1‑150 (MQ=255) gCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGa < 2:1371697/150‑1 (MQ=39) cTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAg > 2:1598492/1‑150 (MQ=38) tGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCgggcgg > 2:54713/1‑147 (MQ=25) gTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCa > 2:1379991/1‑150 (MQ=37) gTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCa > 2:1379563/1‑150 (MQ=35) ttGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCaa > 2:704578/1‑150 (MQ=35) aaaaaacgctgcgctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAg > 1:420954‑M1/61‑150 (MQ=255) gCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCaa < 2:837670/99‑1 (MQ=39) gCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCaa > 1:837670/1‑99 (MQ=39) cTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGcc < 1:1598492/150‑1 (MQ=38) ttCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGccc > 2:1917681/1‑150 (MQ=38) ttCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGccc > 2:848959/1‑150 (MQ=38) cTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCgg > 2:636246/1‑150 (MQ=38) tAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGc < 2:51777/87‑1 (MQ=38) tAAGCGCGCGATAGTTCAGGCGACGAAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGc > 1:51777/1‑87 (MQ=255) cgctgcgctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGTGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGa > 2:161501‑M1/55‑150 (MQ=255) cgcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGa < 1:1481045/150‑1 (MQ=39) gcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg < 1:656233/150‑1 (MQ=39) gcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAg < 1:607079/150‑1 (MQ=38) gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAggg > 1:81972/1‑150 (MQ=38) aGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAAccc > 2:389200/1‑150 (MQ=38) ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg > 1:1008721/1‑150 (MQ=39) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTa < 1:1777822/150‑1 (MQ=39) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCGTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTa > 2:171730/1‑150 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAgg > 2:117358/1‑79 (MQ=35) gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAgg < 1:117358/79‑1 (MQ=35) ttGGGACTTCACGTGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGGTGGGCATG‑GACGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGACTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAggg < 2:1028789/150‑1 (MQ=11) ttGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGACTTCAGAGTTTTTGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAggg > 2:1591333/1‑150 (MQ=14) ttGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCAGAGACCCCAGGGATGTGTGCTGCAGCGCGTGGTCCCGGGATCATTCCCAGTGCGAGGGTACCCCGGAGCGTCGCCCAggg > 2:1349633/1‑150 (MQ=11) gACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCg > 2:846200/1‑150 (MQ=39) cTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATCCATGGGGCCt < 2:1368504/85‑1 (MQ=255) aggaggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCaa < 1:740415/104‑1 (MQ=33) aggaggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCaa > 2:740415/1‑104 (MQ=33) ggaggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATa > 2:1514932/1‑150 (MQ=40) gCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAg > 1:1042116/1‑150 (MQ=255) gCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAg < 2:843902/150‑1 (MQ=38) cGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGGCGGATGATATTAGCTCAGc < 2:928655/150‑1 (MQ=255) cGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGc > 1:852698/1‑150 (MQ=255) ctggtgAAGGGAGGTGACGGGCAGG‑GATCCCCGTCAAGCGCTGAGGCCCCATGGATAGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt < 1:283057/145‑1 (MQ=255) CTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt > 1:1917681‑M1/1‑150 (MQ=255) TTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTg < 2:1829262‑M1/150‑1 (MQ=255) TGCGAAGGGGGTTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTgg > 1:1514932‑M1/1‑150 (MQ=255) aaGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCACGCCCGGAGCGAGGGAACACCGGAGGGTAGCGCAGGGGCCGGATGATAGGAGCGGAGCGTTTTTTGGTTAc < 2:1010786/150‑1 (MQ=255) gggAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACtt < 1:846200/150‑1 (MQ=40) ttGACGGGCATC‑CATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGt > 1:378054/2‑150 (MQ=255) gggCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAgg > 2:281212/1‑103 (MQ=38) gggCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAgg < 1:281212/103‑1 (MQ=38) gCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt > 2:1037446/1‑150 (MQ=40) gCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt < 1:175978/150‑1 (MQ=40) gCANG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt > 2:1194376/1‑150 (MQ=255) aTG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCAGAGCGTCGTAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa < 1:704578/150‑1 (MQ=255) g‑gATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 1:351411/1‑150 (MQ=40) | CCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATG‑GATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACA > NC_002947/2412771‑2413068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |