| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,434,178 | T→C | 6.9% | intergenic (+78/+30) | uup → / ← PP_2132 | ABC transporter ATP‑binding protein/universal stress protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,434,178 | 0 | T | C | 6.9% | 247.1 / 4.7 | 86 | intergenic (+78/+30) | uup/PP_2132 | ABC transporter ATP‑binding protein/universal stress protein |
| Reads supporting (aligned to +/- strand): ref base T (41/39); new base C (3/3); total (44/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
GGCGCGGATCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGA > NC_002947/2434031‑2434320 | ggCGCGGATCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTgg < 1:184786/150‑1 (MQ=255) aTCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGa > 2:1376260/1‑150 (MQ=255) tCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCCAGCCcgcgcc < 1:730544/150‑3 (MQ=255) tCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCCAGCCcgcgcc < 1:1633523/150‑3 (MQ=255) agaAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGGTTACCATACCCTTGCAGGCGCGGGCTGGCCCGCGAagag > 1:98832/1‑150 (MQ=255) gaAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAgg > 2:81242/1‑150 (MQ=255) aaGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGc < 2:602366/150‑1 (MQ=255) aGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCg < 2:906361/150‑1 (MQ=255) gCTGCAGGGCGAGGTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCACTTCGCGGGTAAAGCCGCACCTGAAGGTATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCgg < 1:879438/150‑1 (MQ=255) gCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCgg < 2:32967/150‑1 (MQ=255) gggCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAg < 1:1465044/150‑1 (MQ=255) cTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATCCCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGt < 2:700476/150‑1 (MQ=255) gATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTaaa > 1:1706396/1‑150 (MQ=255) gtggAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGAGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCttcttc > 2:739762/1‑150 (MQ=255) gtgctggcggtacgcttgctgaagaaggattgactggaccagaacccGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCggg > 2:1811541‑M1/48‑124 (MQ=255) gtgctggcggtacgcttgctgaagaaggattgactggaccagaacccGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCggg < 1:1811541‑M1/77‑1 (MQ=255) gcgcTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAaga < 2:1606111/115‑1 (MQ=255) gcgcTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAaga > 1:1606111/1‑115 (MQ=255) tGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGt > 1:1846434/1‑150 (MQ=255) gCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTACAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTAcc < 1:1481326/150‑1 (MQ=255) gAGCTGGAGGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGcc < 1:1908703/150‑1 (MQ=255) aGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTGGCAGGCGCGGGACACCCTGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCa > 2:258707/1‑150 (MQ=255) gAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACg > 1:1342505/1‑150 (MQ=255) ggCTGTTTGGCGTTAGCCTGTTCCGGCCTCTTCTCGGGTAATGCCGCGCTGGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTca < 2:1342505/150‑1 (MQ=255) tGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGAGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCacac < 1:739762/150‑1 (MQ=255) aTTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCa < 2:530204/107‑1 (MQ=255) aTTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCa > 1:530204/1‑107 (MQ=255) aTTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACgg > 2:36680/1‑150 (MQ=255) gTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCAcc > 1:84288/1‑150 (MQ=255) aGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTAAAATCAGCACGTCACACGGCGCACCGTg < 1:258707/150‑1 (MQ=255) ccTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTgca > 1:1871807/1‑150 (MQ=255) cTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGgcg > 2:696580/1‑140 (MQ=255) cTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGgcg < 1:696580/140‑1 (MQ=255) tGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCCCCGTgccgc > 2:1924013/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATc > 2:1402674/1‑150 (MQ=255) cGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATc > 2:563985/1‑150 (MQ=255) CCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATc < 2:247371‑M1/93‑1 (MQ=255) CCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATc > 1:247371‑M1/1‑93 (MQ=255) CTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTcaca < 1:380705‑M1/125‑1 (MQ=255) CTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTcaca > 2:380705‑M1/1‑125 (MQ=255) CTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCa < 1:1409025‑M1/132‑1 (MQ=255) CTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCa > 2:1409025‑M1/1‑132 (MQ=255) CTCTTCGCGGGTAAAGCCGCACCGGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTg > 2:98832‑M1/1‑150 (MQ=255) TCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTgg > 2:1871807‑M1/1‑150 (MQ=255) CGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGt > 1:1722748‑M1/1‑150 (MQ=255) gcgGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGACACACCAATCCTTCTTCGGCGATCATCTGGCCATCAGATGACACGGCGCACCGTGCAGCACATCGTTGGCCGTg < 1:36680/150‑1 (MQ=255) GCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTc > 1:363332‑M1/1‑82 (MQ=255) GCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTc < 2:363332‑M1/82‑1 (MQ=255) GGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGa < 1:1920912‑M1/150‑1 (MQ=255) GTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGc < 2:1771353‑M1/150‑1 (MQ=255) aGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCcag < 2:1732392/150‑1 (MQ=255) gCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTgca > 1:812640/1‑124 (MQ=255) gCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTgca < 2:812640/124‑1 (MQ=255) gCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCcagc > 1:568976/1‑150 (MQ=255) ccGCACCTGCAGGGATTGCCATCCCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCcagca < 2:1574727/150‑1 (MQ=255) ccGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCAAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCcagca < 1:1771353/150‑1 (MQ=255) cGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCcagcag < 2:1920912/150‑1 (MQ=255) cTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATg > 1:1882849/1‑150 (MQ=255) tGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGc > 2:1884395/1‑129 (MQ=255) tGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGc < 1:1884395/129‑1 (MQ=255) gCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATgtc > 1:1524621/1‑148 (MQ=255) ccATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCa > 1:218647/1‑66 (MQ=255) ccATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCa < 2:218647/66‑1 (MQ=255) ccATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAg > 2:377854/1‑142 (MQ=255) ccATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAg < 1:377854/142‑1 (MQ=255) aTACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACg < 1:104235/91‑1 (MQ=255) aTACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACg > 2:104235/1‑91 (MQ=255) aTACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACgg > 1:276240/1‑150 (MQ=255) cccTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCa < 1:1402674/150‑1 (MQ=255) ccTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCGAAGAGCGTCGTGTCGGGGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCAt > 2:988569/1‑150 (MQ=255) ccTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTg < 1:80365/116‑1 (MQ=255) ccTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTg > 2:80365/1‑116 (MQ=255) ccTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCAt > 1:1396398/1‑150 (MQ=255) cTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGcc > 1:1881354/1‑112 (MQ=255) cTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGcc < 2:1881354/112‑1 (MQ=255) cTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTT‑AGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATgg < 2:1008822/150‑1 (MQ=255) ttGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGt > 2:1202681/1‑113 (MQ=255) ttGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGt < 1:1202681/113‑1 (MQ=255) gcctcttcgcgGGCCAGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATgg > 2:618669/8‑150 (MQ=255) gcctcttcgcgGGCCAGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATgg < 1:618669/143‑1 (MQ=255) aGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGc > 1:748056/1‑150 (MQ=255) aGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGc > 1:103271/1‑150 (MQ=255) ttcgcgGGCCAGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGcc > 2:867557/3‑150 (MQ=255) ggCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGcc < 2:1567499/150‑1 (MQ=255) tcgcgGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAACCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCg > 1:1726338/2‑150 (MQ=255) cgcgGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGa < 2:975484/150‑1 (MQ=255) | GGCGCGGATCGAGAAGCTGCAGGGCGAGCTGGATGTATTGGTGGAGCGCTGGGCTGAGCTGGAAGGCTGATTGGCGTTAGCCTGTTCCGGCCTCTTCGCGGGTAAAGCCGCACCTGCAGGGATTGCCATACCCTTGCAGGCGCGGGCTGGCCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGA > NC_002947/2434031‑2434320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |