| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 202,309 | C→G | 6.4% | V2605V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 202,309 | 0 | C | G | 6.4% | 255.5 / 7.9 | 93 | V2605V (GTC→GTG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (40/47); new base G (2/4); total (42/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
TGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAAC > NC_002947/202165‑202458 | tGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCgc > 1:967824/1‑149 (MQ=25) ccAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGAccaaggg < 2:647916/150‑6 (MQ=255) cAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGCCGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAggg < 1:1616295/150‑2 (MQ=25) cAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGc < 2:461183/150‑1 (MQ=35) cAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGc < 1:1836282/150‑1 (MQ=35) cAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACAACATCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGc > 1:115336/1‑150 (MQ=25) aGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCg < 1:627210/150‑1 (MQ=35) cAGCCTGGGCATCACGTCCGCTGTGGATTTAGACGGTCCCATAATGGGGAAC‑‑GCCATTTGGCATACCGATGTCTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTga < 1:223704/150‑1 (MQ=2) gCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTgaga > 1:731837/1‑150 (MQ=35) ccTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAggggtcg > 2:86542/1‑141 (MQ=255) ccTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAggggtcg < 1:86542/146‑6 (MQ=255) cTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATc < 2:791574/150‑1 (MQ=35) gggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCAc < 1:1246581/150‑1 (MQ=33) ggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGCAGGCGGTCCGATCAcc < 2:967824/150‑1 (MQ=12) aCGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGA‑‑GTGAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACAcc > 1:1078179/1‑150 (MQ=12) cGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCa < 1:1048869/150‑1 (MQ=32) gTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCAt < 2:1305869/150‑1 (MQ=32) cGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCAc > 1:44483/1‑150 (MQ=32) tgtgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTg < 1:1715257/128‑1 (MQ=33) tgtgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTg > 2:1715257/1‑128 (MQ=33) tgtgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCt < 2:731837/150‑1 (MQ=32) gtgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTg > 2:1376393/1‑150 (MQ=32) tgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGa < 1:1307611/150‑1 (MQ=32) ggATGTAGACGGTCACACCTTCGAGAACCTGCCCCCGGCC‑‑GGAAACACCTCGCTACCAGTGACCGACAGCTGCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAc < 2:1653539/150‑1 (MQ=11) ggATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAc < 2:1172518/150‑1 (MQ=32) tGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCCCCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaa < 1:981806/150‑1 (MQ=17) gTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTTGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGaa > 1:426401/1‑114 (MQ=17) gTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGaa < 2:426401/114‑1 (MQ=33) gTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaac < 2:1278225/150‑1 (MQ=32) gACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCACCaaa > 1:787599/1‑150 (MQ=17) aCGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACAGAACGCGGTGACAGCACCTACACCATCACCCTGACcaacacaa > 2:858521/1‑147 (MQ=11) ggccacaCCATAGAGTACCTGCAACTGGGC‑‑GGGAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGAc < 2:1052412/147‑1 (MQ=11) ccacCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc < 2:1867773/149‑1 (MQ=25) acacGTTCGAGATCCTGCCACGGGGC‑‑GGCAACGCTTCGGTTCTAGTGTGCTACACCCTCGACCAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGTCCAACAATGACGGTc < 2:889227/150‑1 (MQ=11) acacCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc > 2:545496/1‑150 (MQ=35) acacCTTCGAGAACATGCAACTGGGC‑‑GGCAACGCTTCGGTACAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCCCCTACACCCTCACCCTGACCAACAAAGACGGTc < 2:116953/150‑1 (MQ=255) acCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg > 1:658143/1‑150 (MQ=35) ccTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAACGCTCTCAGATCACCTACACCAGCACCCTGACCAACAAAGACGGTCTGc < 1:800085/150‑1 (MQ=11) cTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGcc > 2:800085/1‑150 (MQ=35) cTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGAGGTGAGATCACCTACACCACCACCCTGACCAACAAAGACGGTCTGcc > 2:721861/1‑150 (MQ=21) cTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTCGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGcc > 2:1408896/1‑150 (MQ=25) aCCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATcaaca > 1:1740905/1‑150 (MQ=35) ccTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTTTCGGTGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATcaacaa < 1:1772277/150‑1 (MQ=255) ccTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATcaacaa < 2:1740905/150‑1 (MQ=35) cTGGAACTGAGC‑‑GGCAACGTGTCAGTTCAAGTGACCGACTCCCTCGACGAGGTGGTGGCGAAGCTGGCCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACCAAGACGGTCTGCCGATCaacaac < 2:1444594/150‑1 (MQ=11) aaCTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACt > 1:1917005/1‑150 (MQ=35) aaCTGGGC‑‑GGCAACGCTGCGGTTCAAGTGACCGACACCCTCGGCGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGACCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACt < 1:875723/150‑1 (MQ=255) cTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCGGACCAACAAGGACGGTCTGCCGATCAACAACCACTCg < 2:690580/150‑1 (MQ=21) tGGGC‑‑GGCAACGCTTCGGTTGAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCgg > 1:965315/1‑150 (MQ=25) tGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCAcagtg > 1:1575983/1‑146 (MQ=25) ggc‑‑ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAg < 1:32146/150‑1 (MQ=34) ggc‑‑ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAg < 2:186105/150‑1 (MQ=35) gcAACGCATCGGTGCCAGTGAGCAACACCGTCCACGGGGGGGTGGCGAAGCTGACCGCGACCCCTGCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGCCCAACAAAGACGGTCTGCCTATCAACAACCACTCGGAGCTGt < 2:115336/150‑1 (MQ=11) tCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGACGCCCAACCGGAGCTCTGCTTTCACCGAAGGCGGTGATGTCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAg < 1:1376393/150‑1 (MQ=11) gTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAgggg < 2:369758/70‑3 (MQ=255) gTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAgggg > 1:369758/1‑68 (MQ=255) gTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTg > 2:392588/1‑150 (MQ=35) gTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTg > 2:192146/1‑150 (MQ=35) aGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCt < 2:931148/144‑1 (MQ=35) aGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCt > 1:931148/1‑144 (MQ=35) aGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGATGACAGa > 1:393027/1‑150 (MQ=21) tGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACg > 2:124797/1‑150 (MQ=35) acacCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGt > 2:465510/1‑59 (MQ=35) acacCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGt < 1:465510/59‑1 (MQ=35) cacCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAATACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGcaccac < 2:787599/150‑1 (MQ=25) ccTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgt > 1:283258/1‑150 (MQ=38) ccTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTCCCGCTCAACAACCACTCGGAGCTGTACTGCAAGCTGACCGACGGCACCACcgt > 2:1155313/1‑150 (MQ=255) cTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgtc < 1:392588/150‑1 (MQ=38) cTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGCCAAGCCGGTAAACAACCACTCGGGGCTGTACTTCAAGCTGACCGACGGCACCACcgtc > 2:529180/1‑150 (MQ=11) acgaGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgtcgtcg < 1:1119356/150‑1 (MQ=38) aGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTgg < 2:154339/150‑1 (MQ=38) gtggtgGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCa > 2:259586/1‑150 (MQ=39) gtggtgGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCa < 2:658143/150‑1 (MQ=39) tggtggCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAg > 2:604974/1‑150 (MQ=39) gtggCGAAGCTGACCGCGCCCCCTTCGGTCAACGAAGGCGGTGAGATCACTTATACCATCCCGCTGACCAACAAATACGGTCTGCCGATCAACAACCACTCGGCGCTTTACGTCAAGCTGACCGACGGCGCCACCGTCGTCGTGGCAGcc < 2:1805697/150‑1 (MQ=11) ggCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaac < 2:1758342/70‑1 (MQ=37) ggCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaac > 1:1758342/1‑70 (MQ=37) gAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAg > 1:1032694/1‑150 (MQ=39) gAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAg > 2:1181426/1‑150 (MQ=39) aaGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGc < 2:1032694/150‑1 (MQ=38) gCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGcac > 2:360168/1‑150 (MQ=39) ccGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCg < 1:1181426/150‑1 (MQ=37) cgcgACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCgg > 2:1464106/1‑150 (MQ=35) gcgACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCTATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGt > 1:1602117/1‑150 (MQ=25) gcgACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGt > 1:1602340/1‑150 (MQ=34) gACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTc < 2:237064/150‑1 (MQ=33) accgccTTCGGTCACCGAAGGGGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTc > 1:1281560/5‑150 (MQ=17) ccccTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTgg < 1:216375/126‑1 (MQ=33) ccccTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGGACTTCAAGCTGACCGACGGCACCACCGTCGTCGTgg > 2:216375/1‑126 (MQ=18) cccTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGc < 2:44483/150‑1 (MQ=32) ccTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCaacaac < 2:1576147/75‑1 (MQ=35) ccTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCaacaac > 1:1576147/1‑75 (MQ=35) ttCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCAc < 1:259586/150‑1 (MQ=32) cACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAAc < 1:1464106/150‑1 (MQ=11) | TGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGC‑‑GGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAAC > NC_002947/202165‑202458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |