Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,511,719	T→C	7.1%	T19A (ACG→GCG) ‡	copA‑I ←	copper resistance protein A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,511,719	0	T	C	7.1%	238.2 / 6.5	84	T19A (ACG→GCG) ‡	copA‑I	copper resistance protein A
Reads supporting (aligned to +/- strand):  ref base T (38/40);  new base C (2/4);  total (40/44)
Fisher's exact test for biased strand distribution p-value = 6.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.98e-01

ACGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCTTGCTGCTTCGT  >  NC_002947/2511583‑2511868                                                                                                                                          |                                                                                                                                                      aCGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGccc                                                                                                                                          >  1:478039/1‑150 (MQ=255)  cGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCa                                                                                                                                         <  1:481307/150‑1 (MQ=255)  cGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCACGCTggcgggcctgg                                                                                                                                         <  1:1749296/150‑7 (MQ=255)  cGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCACGCTggcgggcctgg                                                                                                                                         <  1:289434/150‑7 (MQ=255)   ggTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAg                                                                                                                                        <  1:1353580/150‑1 (MQ=255)     tCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGCGCCGCCAGCACGCTggcgggc                                                                                                                                             <  2:1068654/144‑3 (MQ=255)     tCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGc                                                                                                                                      <  2:1460718/150‑1 (MQ=255)     tCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCAAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGCGCCGCCAGCACGCTggcgggc                                                                                                                                             >  1:1068654/1‑142 (MQ=255)       aGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCt                                                                                                                                    >  2:1346638/1‑150 (MQ=255)         tGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCAGGCCAGGCGTTGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCttt                                                                                                                                  <  1:1670193/150‑1 (MQ=255)         ggCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGAGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCttt                                                                                                                                  <  2:371093/149‑1 (MQ=255)           cGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGa                                                                                                                                <  1:523465/150‑1 (MQ=255)             gTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACa                                                                                                                              >  1:1799693/1‑150 (MQ=255)              tACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACaa                                                                                                                             <  2:1799693/150‑1 (MQ=255)              tACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACaa                                                                                                                             >  2:1181906/1‑150 (MQ=255)               aCGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACaaa                                                                                                                            <  2:602919/150‑1 (MQ=255)                cgcgGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAAc                                                                                                                           <  1:1544295/150‑1 (MQ=255)                           tgtgATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGGCTTTGACTAACTGAcggcgtgg                                                                                                                >  2:1361586/1‑147 (MQ=255)                               aTGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAgggg                                                                                                            <  1:1346638/150‑1 (MQ=255)                                tGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGt                                                                                                           >  1:1694266/1‑150 (MQ=255)                                tGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCGCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGGCCCAGGC‑CCGCCAGGGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGt                                                                                                           <  2:1224032/150‑1 (MQ=255)                                  ttGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGtt                                                                                                          <  1:1902022/149‑1 (MQ=255)                                  ttGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGtt                                                                                                          >  2:1902022/1‑149 (MQ=255)                                   tGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCAAGGCCATGTTGAGGTTGGAGTAGGGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTgc                                                                                                        <  1:1170388/150‑1 (MQ=255)                                        ggAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAAc                                                                                                   >  2:742781/1‑150 (MQ=255)                                         gAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACa                                                                                                  <  2:434281/150‑1 (MQ=255)                                         gAGTCTGGCCAAAGCACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACa                                                                                                  <  1:856458/150‑1 (MQ=255)                                              tGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTAGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCg                                                                                             >  2:260465/1‑150 (MQ=255)                                                gCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAg                                                                                           >  2:749278/1‑150 (MQ=255)                                                gCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAg                                                                                           >  1:1354169/1‑150 (MQ=255)                                                gCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAg                                                                                           <  2:1405258/150‑1 (MQ=255)                                                gCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAg                                                                                           <  2:673676/150‑1 (MQ=255)                                                gCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAg                                                                                           >  1:1436695/1‑150 (MQ=255)                                                 ccAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAgg                                                                                          >  1:459773/1‑150 (MQ=255)                                                 ccAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAgg                                                                                          >  1:505810/1‑150 (MQ=255)                                                  cAATGAAGAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCTCCAGCGTGCTGGCGGCGCCCATGCCTTTGACAAACGTACGGCGGGAGGGGTTCCGCAACATGGCGAGGc                                                                                         <  2:976798/150‑1 (MQ=255)                                                  cAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGc                                                                                         >  2:1417275/1‑150 (MQ=255)                                                  cAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGc                                                                                         >  1:868946/1‑150 (MQ=255)                                                       caCAGCTCGCACTGCTGGCCGGCCAGGTCTCGGCCTTCAGCGCCCCCGAGCAGCGGGGCCCTTAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTGGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGccgaaa                                                                                    <  2:1652104/149‑5 (MQ=255)                                                         cAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGTGTTGCGCAACATGGCGAGGCCTCATGc                                                                                  <  2:5330/150‑1 (MQ=255)                                                         cAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGc                                                                                  <  1:1417275/150‑1 (MQ=255)                                                           gCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGATGCGCAACATGCGGTGGCCTCATggcg                                                                                >  2:1049004/1‑147 (MQ=255)                                                            cTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGa                                                                               >  2:1801014/1‑150 (MQ=255)                                                             tCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGaa                                                                              >  1:293218/1‑150 (MQ=255)                                                             tCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGaa                                                                              <  2:1361509/150‑1 (MQ=255)                                                               gAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATa                                                                            >  1:163424/1‑150 (MQ=255)                                                                aaaTGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAg                                                                           >  1:1807102/1‑150 (MQ=255)                                                                    gCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCAc                                                                       <  2:1714111/150‑1 (MQ=255)                                                                     cTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGTGAGGCCTCATGCGGAATAGCCACg                                                                      >  1:930506/1‑150 (MQ=255)                                                                       ggccggccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCAGAATAGCCACGAt                                                                    <  2:1694266/150‑1 (MQ=255)                                                                        gccggccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATg                                                                                                >  2:257075/1‑121 (MQ=255)                                                                        gccggccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATg                                                                                                <  1:257075/121‑1 (MQ=255)                                                                           ggccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTc                                                                >  1:170065/1‑150 (MQ=255)                                                                           ggccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTc                                                                <  1:206394/150‑1 (MQ=255)                                                                             ccAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGc                                                              >  1:1026931/1‑150 (MQ=255)                                                                                   ctcGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTgccgc                                                        >  2:1068114/1‑150 (MQ=255)                                                                                    tcGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGtcc                                                                >  1:1380156/1‑139 (MQ=255)                                                                                    tcGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGtcc                                                                <  2:1380156/141‑3 (MQ=255)                                                                                        ccTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCctgct                                                   <  2:568250/150‑1 (MQ=255)                                                                                         cTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCctgctg                                                  >  2:1434947/1‑150 (MQ=255)                                                                                           tCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTc                                                <  2:1026931/150‑1 (MQ=255)                                                                                                 gCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAg                                          >  1:123112/1‑150 (MQ=255)                                                                                                   cTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTGAGGTAGCt                                        >  1:681769/1‑150 (MQ=255)                                                                                                      gACCAGCGGGCGCCACAGACCCAGGC‑CCTCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAg                                     >  1:1791927/1‑150 (MQ=255)                                                                                                         cAGCGGGCGCGACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTCGCGCAACATGGCGAGGCCTCATGCCGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCCGGTCGCCGGGGTg                                  >  2:547967/1‑150 (MQ=255)                                                                                                           gCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTc                                                                <  2:1444719/118‑1 (MQ=255)                                                                                                           gCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTc                                                                >  1:1444719/1‑118 (MQ=255)                                                                                                                  ccACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACa                         <  1:1068114/150‑1 (MQ=255)                                                                                                                   cacaGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAg                        >  1:1044030/1‑150 (MQ=255)                                                                                                                    acaGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCTAGGCCTCATGCGGAATAGCCAAGATGTTTGCAGCCGCCTGCTGTCATGTAGCTGAGGTGCACATTACAgt                       >  1:1866709/1‑150 (MQ=255)                                                                                                                    acaGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAgt                       <  2:887709/150‑1 (MQ=255)                                                                                                                     caGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAgtg                      <  2:478039/150‑1 (MQ=255)                                                                                                                     caGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAgtg                      >  1:210230/1‑150 (MQ=255)                                                                                                                        aCCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGtgttg                   <  1:749278/150‑1 (MQ=255)                                                                                                                          ccAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTgcgc                                                                                                      <  1:1526810/65‑1 (MQ=255)                                                                                                                          ccAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTgcgc                                                                                                      >  2:1526810/1‑65 (MQ=255)                                                                                                                             ggC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGc              <  2:1807102/150‑1 (MQ=255)                                                                                                                               c‑ccGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCtc            <  2:505810/150‑2 (MQ=255)                                                                                                                                gccGCCAGCACGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCctgct                                                   <  1:1834130/110‑1 (MQ=255)                                                                                                                                gccGCCAGCACGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCctgct                                                   >  2:1834130/2‑111 (MQ=255)                                                                                                                                  cGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCTtgc          <  2:459773/150‑1 (MQ=255)                                                                                                                                      aGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGc                                                                                  <  2:446252/74‑1 (MQ=255)                                                                                                                                      aGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGc                                                                                  >  1:446252/1‑74 (MQ=255)                                                                                                                                        cGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCTTGCTGCTtc    <  2:1436695/150‑1 (MQ=255)                                                                                                                                          tGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCTTGCTGCTtcgt  >  1:1457367/1‑150 (MQ=255)                                                                                                                                          |                                                                                                                                                      ACGGTCAGTGCGGTACGCGGTCGGCCTGTGATGTTGACCGGAGTCTGGCCAATGAACAGCTCGAAATGCTGGCCGGCCAGGTCTCGGCCTTCAGCGGCCTGGACCAGCGGGCGCCACAGACCCAGGC‑CCGCCAGCGTGCTGGCGGCGCCCAGGCCTTTGACAAACGTACGGCGGGAGGGGTTGCGCAACATGGCGAGGCCTCATGCGGAATAGCCACGATGTTCGCTGCCGCCTGCTGTCAGGTAGCTGAGGTGCACATTACAGTGTTGTCAGCTTGCTGCTTCGT  >  NC_002947/2511583‑2511868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑