Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,513,644 G→C 5.1% G109A (GGC→GCC)  PP_2207 → membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,513,6440GC 5.1% 247.3 / 4.3 79G109A (GGC→GCC) PP_2207membrane protein
Reads supporting (aligned to +/- strand):  ref base G (33/41);  new base C (2/2);  total (35/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.70e-01

CCTTGCCGCGGCCACGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCAGCTTTGGCCAGGGCACAT  >  NC_002947/2513495‑2513793
                                                                                                                                                      |                                                                                                                                                      
ccTTGCCGCGGCCACGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑Cgg                                                                                                                                                        >  1:88337/1‑150 (MQ=255)
   tGCCGCGGCCACGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCaa                                                                                                                                                     <  1:1891846/150‑1 (MQ=255)
            cACGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCt                                                                                                                                            >  1:296857/1‑150 (MQ=255)
             aCGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTc                                                                                                                                           >  2:321667/1‑150 (MQ=255)
               gTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTcc‑c                                                                                                                                        <  2:88337/150‑1 (MQ=255)
                  cACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGc                                                                                                                                     >  1:465292/1‑150 (MQ=255)
                   aCGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCCGAGTCCTTCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGAGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCa                                                                                                                                    >  1:1482867/1‑150 (MQ=255)
                     gCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCAtt                                                                                                                                  >  2:1298779/1‑150 (MQ=255)
                        ggTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGc                                                                                                                               <  1:1065895/150‑1 (MQ=255)
                           gtgCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCa                                                                                                                            <  1:321667/150‑1 (MQ=255)
                             gCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGc                                                                                                                          >  1:1566266/1‑150 (MQ=255)
                             gCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCGGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGc                                                                                                                          <  2:911755/150‑1 (MQ=255)
                               cTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGt                                                                                                                        >  1:1721351/1‑150 (MQ=255)
                                tGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCa                                                                                                                            <  2:351352/145‑1 (MQ=255)
                                tGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCa                                                                                                                            >  1:351352/1‑145 (MQ=255)
                                   ttGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGc                                                                                                                    >  1:1832648/1‑150 (MQ=255)
                                     gtgGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTg                                                                                                                  <  2:97672/150‑1 (MQ=255)
                                        gCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTggg                                                                                                                     <  2:1118951/144‑1 (MQ=255)
                                        gCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTggg                                                                                                                     >  1:1118951/1‑144 (MQ=255)
                                            tCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGacaaca                                                                                                           <  1:1849429/150‑1 (MQ=255)
                                             ccTGCCGGTGATCATCATCAGCGCTCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAgat                                                                                                          <  1:544006/150‑1 (MQ=255)
                                             ccTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcat                                                                                                          <  2:1421960/150‑1 (MQ=255)
                                             ccTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATAGAAAGAGGGCGGCCCGACATTGCCGTGTACTTCGAGCT‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcat                                                                                                          <  1:1671443/150‑1 (MQ=255)
                                              cTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatg                                                                                                         >  2:825442/1‑150 (MQ=255)
                                                gCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGCGGGCTGGACAAcatggg                                                                                                       <  2:1566266/150‑1 (MQ=255)
                                                 ccGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatnggc                                                                                                      <  2:1202277/150‑1 (MQ=255)
                                                 ccGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGCTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCGCACCGTGGGCTGGACAAcatgggc                                                                                                      >  2:963426/1‑150 (MQ=255)
                                                     tGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  >  1:1175440/1‑150 (MQ=255)
                                                        tcatcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGCCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  >  2:922365/1‑147 (MQ=255)
                                                        tcatcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGCCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  >  2:922288/1‑147 (MQ=255)
                                                        tcatcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGCCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  <  1:922365/147‑1 (MQ=255)
                                                        tcatcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGCCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  <  1:922288/147‑1 (MQ=255)
                                                          atcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAAc                                                                                             >  1:1808140/1‑150 (MQ=255)
                                                           tcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑Cg                                                                                                                                       <  2:1359084/107‑1 (MQ=255)
                                                           tcatcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑Cg                                                                                                                                       >  1:1359084/1‑107 (MQ=255)
                                                              tcaGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGATTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTg                                                                                         >  1:1158423/1‑150 (MQ=255)
                                                                aGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGAc                                                                                       >  2:1570867/1‑150 (MQ=255)
                                                                 gcgcCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACg                                                                                      >  2:1403078/1‑150 (MQ=255)
                                                                    cccTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTAAATCAGGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGt                                                                                   <  1:601721/150‑1 (MQ=255)
                                                                     ccTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgg                                                                                                        <  2:492477/128‑1 (MQ=255)
                                                                     ccTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgg                                                                                                        >  1:492477/1‑128 (MQ=255)
                                                                     ccTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGtt                                                                                  >  2:1712388/1‑150 (MQ=255)
                                                                      ctgctgGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTg                                                                                 <  1:228173/150‑1 (MQ=255)
                                                                         ctgGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGt                                                                              <  1:1498150/150‑1 (MQ=255)
                                                                              gCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACaa                                                                         <  2:1832648/150‑1 (MQ=255)
                                                                               cAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAg                                                                        <  1:78407/150‑1 (MQ=255)
                                                                                     ggCGCCACGCTGTACGAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTGGACGGGTTGCGTGACAAGATCAcc                                                                  >  2:372706/1‑150 (MQ=255)
                                                                                     ggCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGGGTGACAAGATCAcc                                                                  <  1:42471/150‑1 (MQ=255)
                                                                                         ccACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGGGCGTCGTCATCG‑‑TTGGTCCGCGGCATTCGCCCATCGTGGGCTGGACACCATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGt                                                              <  1:1875848/150‑1 (MQ=255)
                                                                                          cACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTaa                                                                                              <  2:885118/117‑1 (MQ=255)
                                                                                          cACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTaa                                                                                              >  1:885118/1‑117 (MQ=255)
                                                                                          cACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGAc                                                                                       <  1:792699/124‑1 (MQ=255)
                                                                                          cACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGAc                                                                                       >  2:792699/1‑124 (MQ=255)
                                                                                          cACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTg                                                             <  2:1808140/150‑1 (MQ=255)
                                                                                           aCGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTgg                                                            <  1:1354999/150‑1 (MQ=255)
                                                                                           aCGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTgg                                                            <  1:825442/150‑1 (MQ=255)
                                                                                             gCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGc                                                          >  1:1181185/1‑150 (MQ=255)
                                                                                             gCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGc                                                          >  2:278014/1‑150 (MQ=255)
                                                                                                gTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑GGGCAAGGACATGCCCC‑CGGCATCCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGCGACAACATCACCAAGTGGGCAAc                                                       >  2:128654/1‑150 (MQ=255)
                                                                                                    cAGCGCATCGAAAGCGGGCCGCTGTACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCTTGGGCTGTACAACATGTGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAg                                                   <  1:1533159/150‑1 (MQ=255)
                                                                                                    cAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAg                                                   >  2:1438977/1‑150 (MQ=255)
                                                                                                    cAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAg                                                   <  1:1403078/150‑1 (MQ=255)
                                                                                                     aGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAgg                                                  >  2:289871/1‑150 (MQ=255)
                                                                                                      gcgcATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATTGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAggg                                                 <  2:1238326/150‑1 (MQ=255)
                                                                                                               aaGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGGTCACCAAGTGGGCAACCCAGGGTAGCCAGGt                                        <  2:1444748/150‑1 (MQ=255)
                                                                                                                 gCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTAt                                      <  1:289871/150‑1 (MQ=255)
                                                                                                                   gggCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCacaagcag                                    <  2:1721351/150‑8 (MQ=255)
                                                                                                                       aGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCTGTGTGGCGGGGGATTGgcca                                <  2:465292/150‑1 (MQ=255)
                                                                                                                           ggACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGgcca                                >  2:1304724/1‑146 (MQ=255)
                                                                                                                           ggACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGgcca                                <  1:1304724/146‑1 (MQ=255)
                                                                                                                                ttGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  <  2:515999/75‑1 (MQ=255)
                                                                                                                                ttGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAAcatgggcatgg                                                                                                  >  1:515999/1‑75 (MQ=255)
                                                                                                                                ttGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGt                       <  2:1676266/150‑1 (MQ=255)
                                                                                                                                   ccGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCa                    <  1:1319493/150‑1 (MQ=255)
                                                                                                                                    cGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGc                                             >  2:172916/1‑124 (MQ=255)
                                                                                                                                    cGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGc                                             <  1:172916/124‑1 (MQ=255)
                                                                                                                                         aCGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATc                                                                     >  2:52512/1‑95 (MQ=255)
                                                                                                                                         aCGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATc                                                                     <  1:52512/95‑1 (MQ=255)
                                                                                                                                         aCGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCAGCTTTg              <  2:1175440/150‑1 (MQ=255)
                                                                                                                                           gTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCAGCTTTGGc            >  2:1000786/1‑150 (MQ=255)
                                                                                                                                                      gCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCAGCTTTGGCCAGGGCACAt  <  1:1325647/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CCTTGCCGCGGCCACGTCCACGCTGGTGTGCCTGCTTGTGGCGATCCTGCCGGTGATCATCATCAGCGCCCTGCTGGTGCAAGAGGGCGCCACGCTGTACCAGCGCATCGAAAGCGGGCAGCTGGACATTGCCGGTTACGTCGAGCG‑CGGCAAGGACATGCTCC‑CGGCATTCGCCCAGCGTGGGCTGGACAACATGGGCATGGGTAACCTTGACGGGTTGCGTGACAAGATCACCAAGTGGGCAACCCAGGGTAGCCAGGTATTGGCCAGCCAGGCGTTCAGCTTTGGCCAGGGCACAT  >  NC_002947/2513495‑2513793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑