| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 220,562 | C→G | 7.1% | intergenic (+19/‑109) | PP_0168 → / → PP_5431 | putative surface adhesion protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 220,562 | 0 | C | G | 7.1% | 245.5 / 7.8 | 81 | intergenic (+19/‑109) | PP_0168/PP_5431 | putative surface adhesion protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base G (2/4); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
GCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220415‑220710 | gCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGcacaa < 2:752273/150‑2 (MQ=255) ccGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCCTCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGc < 2:1493795/150‑1 (MQ=255) ccGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGc < 2:1498810/150‑1 (MQ=255) gAAGGTGGTATCGCCAACGCCGACGTGACCAGCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATAACCGGAATCCATCCTACCCTCATCATCCACAACAAGGACAGCTGACAGACGACCGGGGCCGCACAGCgg > 2:58114/1‑150 (MQ=255) gtggtATCGCCAACCCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGcccc < 2:224675/150‑1 (MQ=255) ggtCTCGCCCACGTCCACTTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAAACA‑CTGAACAAGCATATTTAACAGCGGCGACGATCGGACCATCATCCTCCCCAATAAGGTCAGCTGTCAGACCACCGGGGCCGCTGTGCGGCCCCgg < 1:1383404/150‑1 (MQ=255) gCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCttt > 2:542216/1‑150 (MQ=255) ccAACGCGGACGTGACCATCGAGCTGGAAGGCGTCAACGGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTc < 2:388596/150‑1 (MQ=255) ccAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTc < 1:1630925/150‑1 (MQ=255) cGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGc < 2:1082455/150‑1 (MQ=255) cGACGTGACCATCAAGCTGGAAGGCGATTGCTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTAc > 1:529485/1‑150 (MQ=255) ccATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAAc > 2:1461646/1‑150 (MQ=255) cATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCgg > 1:616118/1‑127 (MQ=255) cATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCgg < 2:616118/127‑1 (MQ=255) cATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTTTTTACTGCTACCCGCCAACa > 2:1544367/1‑150 (MQ=255) cATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGAGCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGGCAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACa > 2:457035/1‑150 (MQ=255) aTCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAg > 1:294589/1‑150 (MQ=255) ctaGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCAAACCAAGGACAGCTGACAGACCACCGGGGTTGTACATCTGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcg < 1:1382423/148‑1 (MQ=255) cAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcg < 1:1496309/150‑1 (MQ=255) gCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCag > 2:1382423/1‑149 (MQ=255) aGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCATCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg < 1:1450944/150‑1 (MQ=255) gCGGCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGgc < 2:294589/150‑1 (MQ=255) tCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGcc < 1:542216/150‑1 (MQ=255) aaCTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCgg < 1:1904456/150‑1 (MQ=255) tCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgc < 2:346342/150‑1 (MQ=255) ccTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGCACAACGCTCTTCAGATCTAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgc < 2:529485/149‑1 (MQ=255) aaCCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGGCTgcgcg > 2:1126598/1‑150 (MQ=255) aCCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTcc < 1:365077/106‑1 (MQ=255) aCCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTcc > 2:365077/1‑106 (MQ=255) ccAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGcc > 2:460964/1‑150 (MQ=255) aGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCg > 1:1890382/1‑150 (MQ=255) gATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCGCCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGa > 1:1368796/1‑150 (MQ=255) gATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGa > 2:986714/1‑150 (MQ=255) a‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt < 1:986714/150‑1 (MQ=255) tCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACGACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc < 2:1107436/150‑1 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggt < 1:1836738/83‑2 (MQ=38) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggt > 2:1836738/1‑82 (MQ=38) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 1:694993/1‑150 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActct < 2:1604501/111‑1 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActct > 1:1604501/1‑111 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGccc < 2:40645/131‑1 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGccc > 1:40645/1‑131 (MQ=255) cgatctcgcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgctg < 1:447011/144‑1 (MQ=255) cggcgCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt > 1:906288/1‑137 (MQ=255) cggcgCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt < 2:906288/137‑1 (MQ=255) gcCGATCCGAGGATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCAGCCCCGGCTCTTTCCTGCTACCCGCCGACAGAGCGTACATTGGCGCCGGGCCTGCGCGCCCGGCGATCGTTGCCTAtgctgcagatcg > 2:447011/1‑144 (MQ=255) gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgctg > 2:1594794/1‑143 (MQ=255) gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgctg < 1:1594794/143‑1 (MQ=255) gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTc > 2:686043/1‑148 (MQ=255) gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTc < 1:686043/148‑1 (MQ=255) ccGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTAc > 2:1743852/1‑150 (MQ=255) cGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTAcc < 2:1476194/150‑1 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg > 2:674869/1‑88 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTg < 1:674869/88‑1 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 1:217485/1‑105 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc < 2:217485/105‑1 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaac > 1:1621086/1‑150 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGACCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 1:1509403/1‑121 (MQ=255) tcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGACCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt < 2:1509403/121‑1 (MQ=255) catcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACg > 1:1471235/1‑150 (MQ=255) atcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGACTGTGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGt < 1:527359/150‑1 (MQ=255) tcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTg > 1:684738/1‑150 (MQ=255) ccACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGa < 1:637433/150‑1 (MQ=255) aacaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAg > 1:708701/1‑150 (MQ=255) aacaaGGACAGCTGACAGAAAACCGGGGCCGCATCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAg < 2:16755/150‑1 (MQ=255) acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg < 1:1461646/150‑1 (MQ=255) acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg < 2:1471235/150‑1 (MQ=255) acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGCCTGGCAACAAGGAAACAACGTGACGAgg < 1:1698249/150‑1 (MQ=255) caaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGt > 1:1258197/1‑121 (MQ=255) caaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGt < 2:1258197/121‑1 (MQ=255) cTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCa > 1:1778674/1‑150 (MQ=255) cTGACAGACCACCGGGGCCGCACAGCGGAAAAGCATATCGACTTCAACCGGCCAACAGCGCATACTCTGGCGCTGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCa < 1:1374529/150‑1 (MQ=255) gACAGACCCCCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGTCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACCAGGAAACAACGTGACGAGGGACATCGCCATg < 1:434725/150‑1 (MQ=255) gACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaac > 1:1592597/1‑129 (MQ=255) gACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaac < 2:1592597/129‑1 (MQ=255) gACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATg > 2:1329495/1‑150 (MQ=255) aGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCAt < 1:1638171/146‑1 (MQ=255) aGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCAt > 2:1638171/1‑146 (MQ=255) cccaccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTa < 1:376190/149‑1 (MQ=255) ggCCGCACAGCGGCCCCGGCTCTTGCCTGCTACCCGCCCACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaac < 1:1827798/150‑1 (MQ=255) gCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa > 2:1668515/1‑150 (MQ=255) gCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa > 2:1230910/1‑150 (MQ=255) cacaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaac > 2:1775239/1‑150 (MQ=255) acaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGcaacgcaacg < 2:708701/150‑1 (MQ=255) | GCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAA‑CTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220415‑220710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |