| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,951,384 | A→C | 17.8% | intergenic (‑120/+41) | oguA ← / ← PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,951,384 | 0 | A | C | 17.8% | 149.9 / 35.0 | 79 | intergenic (‑120/+41) | oguA/PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (37/28); new base C (8/6); total (45/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.40e-01 | |||||||||||
GCAGGGTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAGTTCTGGAAGCA > NC_002947/2951245‑2951532 | gCAGGGTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGaa < 2:1443788/150‑1 (MQ=255) cAGGGTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAag > 1:1925274/1‑150 (MQ=255) aGGGTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGTGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAaga > 1:1019550/1‑150 (MQ=255) gggTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAagag > 2:697830/1‑150 (MQ=255) gggTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAagag > 1:1727630/1‑150 (MQ=255) gggTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAagag < 1:1183573/150‑1 (MQ=255) gggTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAagag < 2:554845/150‑1 (MQ=39) ttttGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTTGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGc < 1:506043/149‑1 (MQ=255) gATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGATTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACg > 1:507290/1‑150 (MQ=255) aTGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCcgc > 1:876036/1‑129 (MQ=255) aTGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCcgc < 2:876036/129‑1 (MQ=255) cAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGTGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGACGAGG‑GAACTTGGTGCAGCCAt < 2:1019550/150‑1 (MQ=255) aaGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAaga < 1:723265/127‑1 (MQ=38) aaGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAaga > 2:723265/1‑127 (MQ=39) ccTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGaaa < 1:1547347/150‑1 (MQ=255) tGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑a > 1:13371/1‑150 (MQ=255) tACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGaaa < 2:327645/141‑1 (MQ=255) tACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGaaa > 1:327645/1‑141 (MQ=255) gCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACgg > 2:120334/1‑117 (MQ=255) gCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACgg < 1:120334/117‑1 (MQ=255) cGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAAGAGGc < 2:560597/101‑1 (MQ=37) cGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCCGCCAAGAGGc > 1:560597/1‑101 (MQ=37) aTGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCacac > 2:160658/1‑150 (MQ=255) aTGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCacac > 1:218950/1‑150 (MQ=255) aTAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTcc > 1:1115486/1‑150 (MQ=255) ggCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGCACAGCGCAGCGGCCGAGCAACTGAT‑CAGCTAGGAATG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGc < 1:1470241/150‑1 (MQ=255) tATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCa > 1:1825378/1‑150 (MQ=255) ttGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCcgc < 1:1730689/72‑1 (MQ=25) ttGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTCGCGGCTCTAGCcgc > 2:1730689/1‑72 (MQ=25) aagcaagcTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCa < 1:1217004/81‑1 (MQ=255) aagcaagcTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCa > 2:1217004/1‑81 (MQ=255) cTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGt < 1:160658/150‑1 (MQ=255) tGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCTGCGAGAGCCGCGACGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGttt > 2:463722/1‑150 (MQ=255) tGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCacac < 2:1512926/92‑1 (MQ=255) tGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCacac > 1:1512926/1‑92 (MQ=255) aTTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAg < 2:27489/117‑1 (MQ=255) aTTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAg > 1:27489/1‑117 (MQ=255) ttGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCa > 1:75126/1‑115 (MQ=255) ttGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCa < 2:75126/115‑1 (MQ=255) ttGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTc > 1:1154583/1‑150 (MQ=255) tataCAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAAc < 2:507290/150‑1 (MQ=255) tataCAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAAc < 2:218950/150‑1 (MQ=255) aCAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCGATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCCGCACCCGTGCAAACCCCAGCGGGTTAGCGTTTTTCAACGCa > 2:1095747/1‑150 (MQ=255) cAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGaaa > 1:1904665/1‑74 (MQ=255) cAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGaaa < 2:1904665/74‑1 (MQ=255) aGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATc < 2:1925274/150‑1 (MQ=255) gCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATcc < 1:1495476/150‑1 (MQ=255) cTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTcgcg > 1:1433247/1‑88 (MQ=255) cTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTcgcg < 2:1433247/88‑1 (MQ=255) cTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCggg > 1:999232/1‑114 (MQ=255) cTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCggg < 2:999232/114‑1 (MQ=255) cTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCg < 2:13371/150‑1 (MQ=255) tCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCgg > 1:829770/1‑150 (MQ=255) tCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCgg > 2:1830031/1‑150 (MQ=255) tCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCgg > 2:906432/1‑150 (MQ=255) gAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATcac > 2:1761231/1‑74 (MQ=255) gAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATcac < 1:1761231/74‑1 (MQ=255) gTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGCGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGt > 2:1072210/1‑117 (MQ=255) gTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGt < 1:1072210/117‑1 (MQ=255) cttccgatctTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAGAGGGTCAATCTCCAGAGGGTTAGCTTTTTTCAACGCATCCGGCAGCAGTGCGTCa < 1:239578/143‑1 (MQ=255) cGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAgg < 2:1154583/150‑1 (MQ=255) cGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAgg > 2:1396646/1‑150 (MQ=255) ggCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCA‑CCATTAGTGTAACAGGAGTCCAGACGTGTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAggg < 1:697830/150‑1 (MQ=255) gCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGt > 2:1264773/1‑150 (MQ=255) gCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGt > 2:823301/1‑150 (MQ=255) gCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGt > 1:618363/1‑150 (MQ=255) gCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑ACACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGt > 2:47243/1‑150 (MQ=255) gCCTCTTCGCGGCTCTAGCCGCCAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAgggg > 1:1358161/1‑149 (MQ=39) ccTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTa < 2:1219298/150‑1 (MQ=255) ctctTGGCGGCTAGAGCCGCGAAGCCATTG‑GCGCGGGTTGCAGCCATGAAAG‑ATCACACCGACTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAg > 1:347784/1‑150 (MQ=255) tctTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCgg > 2:229760/1‑92 (MQ=255) tctTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCgg < 1:229760/92‑1 (MQ=255) tctTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTaat > 2:669153/1‑148 (MQ=255) tctTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGAATCCGGCAGCAGTGCGTCAGGGTAGt > 2:1391830/1‑150 (MQ=255) tctTCGCGGCTCTAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAGt > 1:1380396/1‑150 (MQ=255) tctTCGCGGCTCTAGCCGCCAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGGGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAGt > 1:785742/1‑150 (MQ=39) ctTCGCGGCTCTAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGgcag > 1:82692/1‑132 (MQ=255) gcTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAGTTCTGGAAg < 1:823301/150‑1 (MQ=255) tAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGGAGCAGTGCGTCAGGGTAGTTCTGGAAGcc > 1:203706/1‑149 (MQ=255) | GCAGGGTTTGTAGATGACATGGTGCAAGCCTGCGCAATACGCATCGGCGATTACCGATGTCATAGGCGCTCGGTATTGTAAGCAAGCTTTTTACTGATTGTATACAGCTCGAAGTGCCCGTGCCGGCCTCTTGGCGGCTAGAGCCGCGAAGAGGCCG‑GCACGGGTTGCAGCCATGAAAG‑ATCACACCGCCTCGCGGCTGCTCACACCCTCCAGCAACCGGGCAATCCCCAGCGGGTTAGCGTTTTTCAACGCATCCGGCAGCAGTGCGTCAGGGTAGTTCTGGAAGCA > NC_002947/2951245‑2951532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |