| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 225,545 | A→T | 5.9% | L39Q (CTG→CAG) | PP_0173 ← | transcriptional factor‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 225,545 | 0 | A | T | 5.9% | 307.5 / 7.5 | 101 | L39Q (CTG→CAG) | PP_0173 | transcriptional factor‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (44/51); new base T (3/3); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGAAGTCGCATTTGGTT > NC_002947/225398‑225693 | tCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCagcagc > 1:812208/1‑150 (MQ=255) aTTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAgcgc > 2:341798/1‑150 (MQ=255) aTTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGATGCGCGTCAGCCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAgcgc < 2:152824/150‑1 (MQ=255) ttGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGcc < 1:1422328/150‑1 (MQ=255) cAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCg < 2:812208/150‑1 (MQ=255) ggAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGa < 2:1692439/150‑1 (MQ=255) gAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCTCAGCAGCGCCCACTGTCGGCTGAg < 2:375403/150‑1 (MQ=255) tatCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGt < 1:1718289/150‑1 (MQ=255) tCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTgg > 2:118869/1‑150 (MQ=255) tCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTgg > 1:1414545/1‑150 (MQ=255) tCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTgg > 1:1650760/1‑150 (MQ=255) tCAGAGAAAGTTCGTCGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTgg > 2:1662472/1‑150 (MQ=255) aGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGgcg > 2:1774061/1‑150 (MQ=255) gCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGCCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGgcgc > 2:359026/1‑150 (MQ=255) gAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGGACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGa > 1:763815/1‑150 (MQ=255) caaggCTCGGGGAGGTCAGGGTAGACAGAGAGTTTGGTCACCGTGACGCCAGCGTCACGTAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGTTCACTGTCGGCTGAGGGTGGCGCGa < 2:781791/146‑1 (MQ=255) aGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtg > 1:1329569/1‑150 (MQ=255) gCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGTCCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtgg < 1:1442583/150‑1 (MQ=255) gCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtgg > 1:181263/1‑150 (MQ=255) tCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCTGCTGCGccag < 2:1683688/122‑3 (MQ=255) tCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCTGCTGCGccag > 1:1683688/1‑120 (MQ=255) tCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtggtg < 2:1593966/150‑1 (MQ=255) cGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGtggtgg < 1:564640/150‑1 (MQ=255) cGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGtggtgg < 1:1577871/150‑1 (MQ=255) gTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGc > 1:333803/1‑150 (MQ=255) gTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCATATGGCGGCGGAGGGTGGCGCGAGTGGTGGc > 1:478647/1‑150 (MQ=255) aGGTCACGCTCGACAGTGTGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAAc < 1:1735341/150‑1 (MQ=255) ggTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACg < 2:181263/150‑1 (MQ=255) tCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGc > 2:360401/1‑150 (MQ=255) tCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGc > 1:1699191/1‑150 (MQ=255) aCGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCaa > 2:477386/1‑150 (MQ=255) gCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtg < 2:786542/134‑1 (MQ=255) gCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAgtg > 1:786542/1‑134 (MQ=255) gACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATa < 2:896795/150‑1 (MQ=255) aCAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATaa < 2:567531/150‑1 (MQ=255) cAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAAc > 2:1777278/1‑150 (MQ=255) gTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGACCGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGt > 2:819053/1‑150 (MQ=255) gCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTcc < 1:477386/150‑1 (MQ=255) gtctGCCGACCGTGCCGCAAACGTCACGCAGGCGACAGACCAGCCCGGCGCTGGTTATGCCTGGGGAACGGCTGGCCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCtt < 2:1534794/147‑1 (MQ=255) gTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCtt < 2:609466/150‑1 (MQ=255) gTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCtt > 1:1591994/1‑150 (MQ=255) ttGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGt < 1:1487486/150‑1 (MQ=255) cTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGAGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTa < 2:691702/150‑1 (MQ=255) tGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGt > 1:827805/1‑146 (MQ=255) tGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGt < 2:827805/146‑1 (MQ=255) gACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAgg < 1:180068/150‑1 (MQ=255) gTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCttt > 1:916032/1‑149 (MQ=255) gTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTg > 2:1176806/1‑150 (MQ=255) tGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGc < 2:1591994/150‑1 (MQ=255) gCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCa > 2:435312/1‑150 (MQ=255) ccAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAg > 1:1115721/1‑92 (MQ=255) ccAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAg < 2:1115721/92‑1 (MQ=255) ccAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCaa > 1:1072752/1‑150 (MQ=255) cGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAgg < 1:1662472/150‑1 (MQ=255) gcgcCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCAt < 1:1677312/150‑1 (MQ=255) gcCAGACCAGCTCGGCGCTGGTTATGCCTGGGGTCAGGCTACCCAGCACGTTACGCAGCGTGCACTGCCGTTTTTTGGAGGAGAGAGTGAAACCGAGCAACATAAGATATCGTCCTTATCTAGGCTTGCCGCAATAGGATGGCGGCATGc > 1:975629/1‑150 (MQ=255) gcCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGc > 1:1472614/1‑150 (MQ=255) cAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGt < 2:261628/150‑1 (MQ=255) gACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCAt < 1:1648453/144‑1 (MQ=255) gACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCAt > 2:1648453/1‑144 (MQ=255) gACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCAt > 2:1650068/1‑144 (MQ=255) gACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCAt < 1:1650068/144‑1 (MQ=255) gACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTgg < 1:1599754/150‑1 (MQ=255) aCCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTggg < 2:333803/150‑1 (MQ=255) cAGATCGGCGCTGTTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGc > 2:177069/1‑150 (MQ=255) cTCGGCGCTGGTTATGCCTGGTTATCGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGACGTGTGCTCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATg < 1:1553900/150‑1 (MQ=255) cGGCGCTGGTTATGCCTGGGGGACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGc > 1:241966/1‑150 (MQ=255) ggCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCa > 2:613379/1‑150 (MQ=255) gcTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAAtt < 1:63744/150‑1 (MQ=255) ggTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGc < 2:763815/150‑1 (MQ=255) ggTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGc < 1:341798/150‑1 (MQ=255) ttATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTACGCTTGCCGCAATAGGCTGGCGGCATGCGTGGGGCATGGCACTTGGccc > 2:667953/1‑149 (MQ=255) aTGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATCGCGGCATGCGTGGGGCATGGCAATTGGCcaca < 2:1072020/150‑1 (MQ=255) gCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAg > 2:1824670/1‑98 (MQ=255) gCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAg < 1:1824670/98‑1 (MQ=255) cTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCt > 1:1450604/1‑150 (MQ=255) cTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCt > 2:102160/1‑150 (MQ=255) cTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCt > 1:1327354/1‑150 (MQ=255) ggggAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGc < 1:118869/150‑1 (MQ=255) gggAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCt < 2:1472614/150‑1 (MQ=255) tGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGcc > 1:779999/1‑91 (MQ=255) tGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGcc < 2:779999/91‑1 (MQ=255) ggCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATg > 1:26775/1‑119 (MQ=255) ggCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATg < 2:26775/119‑1 (MQ=255) gCAATTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGaa > 1:21330/1‑150 (MQ=255) gCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGaa > 1:687248/1‑150 (MQ=255) gCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGaa < 1:819053/150‑1 (MQ=255) aCTTGCGCAGCAGCGCCTATTGTCGGCTGAGGGTGGCGCCAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTCGCGCAGTAGGATTGCGGCATGCGTGGGGCATGGCAATTGGCCACAGTCTGCTCAGATTAAGGAAGTc < 2:478647/150‑1 (MQ=255) aCTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGAAGTc < 2:315586/150‑1 (MQ=255) aCTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGAAGTc < 2:1450604/150‑1 (MQ=255) tgggCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATg > 1:1907282/3‑95 (MQ=255) tgggCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATg < 2:1907282/93‑1 (MQ=255) ggCGCTGCTGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTg > 2:526848/1‑130 (MQ=255) ggCGCTGCTGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTg > 2:526708/1‑130 (MQ=255) ggCGCTGCTGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTg < 1:526848/130‑1 (MQ=255) ggCGCTGCTGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTg < 1:526708/130‑1 (MQ=255) ggCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAAtt < 2:1254770/118‑1 (MQ=255) ggCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAAtt > 1:1254770/1‑118 (MQ=255) cagcGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACGGCCTGCTCAGATCAAGGAAGTCGCATTTGGtt < 2:1072752/150‑1 (MQ=255) cagcGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGAAGTCGCATTTGGtt < 2:1650760/150‑1 (MQ=255) | TCATTGCGTTCCAGCGGGAATATCAGCGAAAGCTCGTTGAGGTCACGCTCGACAGTGCGTTTGCTGACCGTGAAGCCAACGTCACGCAGGCGCCAGACCAGCTCGGCGCTGGTTATGCCTGGGGAACGGCTGGGCAACTGGCGCAGCAGCGCCCACTGTCGGCTGAGGGTGGCGCGAGTGGTGGCGAACGGCAAAAGATAACGTCCTTGTCTAGGCTTGCCGCAATAGGATGGCGGCATGCGTGGGGCATGGCAATTGGCCACAGCCTGCTCAGATCAAGGAAGTCGCATTTGGTT > NC_002947/225398‑225693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |