| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,053,266 | T→C | 6.0% | intergenic (+24/+22) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,053,266 | 0 | T | C | 6.0% | 185.4 / 2.1 | 66 | intergenic (+24/+22) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base T (35/27); new base C (2/2); total (37/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.82e-01 | |||||||||||
TCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTCC > NC_002947/3053118‑3053414 | tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc > 2:1494761/1‑150 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 2:1333776/150‑1 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCAAGTACGAACGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGcc > 1:1672635/1‑150 (MQ=255) cGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCg < 2:356004/150‑1 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGaa < 1:1890403/150‑1 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACa > 1:639434/1‑150 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc > 1:200391/1‑130 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc < 2:200391/130‑1 (MQ=255) tCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGgcgc > 1:1506011/1‑150 (MQ=255) tCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCCCGAAGCGGCCGGAACAGCTCAACGgcgc < 2:994154/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑a > 1:845742/1‑150 (MQ=255) gAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATa > 1:713155/1‑150 (MQ=255) ggggTCACACGCGGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCa < 1:485378/149‑1 (MQ=255) gTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑CCTATCAGCa > 1:1020681/1‑150 (MQ=255) tCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCaa > 2:737239/1‑150 (MQ=255) cGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCg < 2:1099026/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGa < 1:737239/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 2:1240961/111‑1 (MQ=39) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg > 1:1240961/1‑111 (MQ=38) acaAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCa > 1:810915/1‑150 (MQ=255) acaAGCCCGTAAGACCGATGAAACTCAAGACGGAGATGAGACCTCGGCAGGCCATCGGCGGGGCATAGCGGTTGGCCGCCTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGAGATCGCCa > 1:1180856/1‑150 (MQ=255) gCCCGTAAGACCGATGAAACTCAAGCCGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCAc > 1:1204413/1‑150 (MQ=255) gCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGAGGCCGGAACAGCCCCACGGCGCAG‑ATAAGCAACAAAAGCGATATCGCCAGCAc > 2:1854133/1‑150 (MQ=255) cccGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACt < 2:1506011/150‑1 (MQ=255) ccGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTg > 1:494038/1‑150 (MQ=255) cGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGa < 1:1494761/150‑1 (MQ=255) aaGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGa < 1:1822816/150‑1 (MQ=255) gACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCTGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCAGGAGCTCTGAGGATg > 1:856104/1‑150 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:1854133/150‑1 (MQ=255) aTGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTg > 1:1540138/1‑150 (MQ=255) tGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGTGAAGCGGCCGGAACAGCTCAACGGAACCGTGTAAT‑AGCGAAATCGATAGCGCCAGCACTGAGGATGGCTTGt > 1:1562146/1‑150 (MQ=255) aaCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTAcc > 2:1392606/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg < 1:1821535/150‑1 (MQ=255) tCAAGACGGCGAAGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg > 2:1715816/1‑150 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCATTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTAccc < 1:1840901/146‑1 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTAccc > 2:1840901/1‑146 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCAGTGGCCTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGtt > 1:1589502/1‑150 (MQ=255) gcgcTGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ACAATTAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGcac < 2:1505149/150‑1 (MQ=255) gATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACAt > 1:401355/1‑150 (MQ=255) tGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTg > 2:908106/1‑150 (MQ=255) gCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGt < 2:639434/150‑1 (MQ=255) gCCAGCGGCTGGCCAGTGGGTTGGCATGGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGt < 2:669651/150‑1 (MQ=255) ccATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGtt > 1:1837517/1‑150 (MQ=255) cATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGttt < 2:1114523/150‑1 (MQ=255) cATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGttt < 1:1392606/150‑1 (MQ=255) aTCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTg > 2:159171/1‑150 (MQ=255) tgGCCAATGGCTTGGCATAGCGGTTGGACGCTTCGCGAGTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCCG‑ATAATCAGCAAAATCGATATCGCCAGCCCTCACGATGGCTTGTACCCGGTTGTGCACCTTGGGTTTGCGCaaa > 2:386856/1‑150 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:1540138/150‑1 (MQ=255) gCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTGGTGCACATTGAGTTTGCGCAAAATCGCCGaa > 2:992399/1‑150 (MQ=255) tAGCGGTTGGCCGCTTCGCGGGTTGATCCGGGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAGATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACGTTGAGGGTGCGCAAAATCGCGGAAACGTGGGc > 1:1201122/1‑150 (MQ=255) tAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGc < 2:1672635/150‑1 (MQ=255) gTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGa < 2:810915/150‑1 (MQ=255) gTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGa > 2:521576/1‑150 (MQ=255) cggCCGCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGAc < 2:558017/148‑1 (MQ=255) cggCCGCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGAc > 1:558017/2‑149 (MQ=255) gCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTggg > 1:1485520/1‑140 (MQ=255) gCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTggg < 2:1485520/140‑1 (MQ=255) ccGCTGCGCGGGGTGATCCGCGAAGCGGCCGGGACAGCTCAACGGCGCAG‑ATAATCAGCAAAATAGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGACTTGACggtg > 1:1826103/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATc < 2:294136/54‑1 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATc > 1:294136/1‑54 (MQ=255) cgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 1:908106/150‑1 (MQ=255) cgGGTTGATCCAAGAAGCGGCCGGAATATGTCAACGGCGCAC‑ATAATCAGCAAAATCGCTGTCGCACGTCATCCTGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 1:1772627/150‑1 (MQ=255) ggTTGATCCGCGGAGCTGCCGGAACCGATCCACTGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGa < 2:713155/150‑1 (MQ=255) ggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGa > 2:1882176/1‑150 (MQ=255) aTCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTcc > 2:721274/1‑150 (MQ=255) aTCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTcc > 2:1822630/1‑150 (MQ=255) tCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg < 1:1623942/83‑1 (MQ=255) tCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg > 2:1623942/1‑83 (MQ=255) | TCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAG‑ATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTCC > NC_002947/3053118‑3053414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |