Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,080,456 C→T 5.7% L129L (CTG→CTA PP_2690 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,080,4560CT 5.7% 202.6 / 2.5 71L129L (CTG→CTAPP_2690hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (36/30);  new base T (2/2);  total (39/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.71e-01

CCTGCTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACGCTCTGGC  >  NC_002947/3080307‑3080604
                                                                                                                                                     |                                                                                                                                                      
ccTGCTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGc                                                                                                                                                        >  2:1180116/1‑150 (MQ=255)
ccTGCTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGc                                                                                                                                                        >  2:1179825/1‑150 (MQ=255)
   gCTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGc                                                                                                                                                     <  2:189885/150‑1 (MQ=255)
    cTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGcc                                                                                                                                                    >  2:690807/1‑150 (MQ=255)
     tCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGccc                                                                                                                                                   <  2:323301/150‑1 (MQ=255)
          tGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGcc                                                                                                                                              >  2:1240501/1‑149 (MQ=255)
               aGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGGATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCGTCCCCTGCACAGCt                                                                                                                                         >  1:1340937/1‑150 (MQ=255)
                 cACCATTACGTCTTGCGCGGCCGCTTCAATGGCTTGTGGCCGGGTTTCACTGCTCAGTTCCGGGGGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGc                                                                                                                                       <  1:773387/150‑1 (MQ=255)
                   ccATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGccc                                                                                                                                     <  1:518230/150‑1 (MQ=255)
                     aTTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGTCCGGGGTTCACTGCGCAGTTCCGGGCGCGGCACGCCGGCGGTAAAATCGGCCCAGTGGGCTCGGCGGGCGTCCTCCGCGCGGGCTTGCCCGTGGCCCCCCTGCACCGCTGCCCgg                                                                                                                                   >  2:665656/1‑150 (MQ=255)
                             ttGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACCGCTGCCGGGCtgccgtg                                                                                                                           >  2:1543288/1‑144 (MQ=255)
                             ttGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTa                                                                                                                           >  2:1430097/1‑150 (MQ=255)
                               gcgcgcCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGc                                                                                                                         <  1:1460455/150‑1 (MQ=255)
                                     ccGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGTAGCCCCTGCACAGCt                                                                                                                                         <  2:1112072/128‑1 (MQ=255)
                                     ccGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGTAGCCCCTGCACAGCt                                                                                                                                         <  2:1110095/128‑1 (MQ=255)
                                     ccGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGTAGCCCCTGCACAGCt                                                                                                                                         >  1:1112072/1‑128 (MQ=255)
                                     ccGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGTAGCCCCTGCACAGCt                                                                                                                                         >  1:1110095/1‑128 (MQ=255)
                                     ccGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCTCGCACAGCTGCCCGGCTCAGGTAGCCcagca                                                                                                                   >  2:992705/1‑150 (MQ=255)
                                        cTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCcagcaaca                                                                                                                <  1:1283057/150‑1 (MQ=255)
                                             aTGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCCACCGCaaa                                                                                                           >  1:753980/1‑150 (MQ=255)
                                             aTGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCaaa                                                                                                           <  1:23420/150‑1 (MQ=255)
                                             aTGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCaaa                                                                                                           <  1:850290/150‑1 (MQ=255)
                                                    ggggCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGTCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTtgt                                                                                                    <  1:1564617/150‑1 (MQ=255)
                                                     gggCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCCGCAACAGCAAACGGTtgtg                                                                                                   >  2:239649/1‑150 (MQ=255)
                                                     gggCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTtgtg                                                                                                   <  1:879162/150‑1 (MQ=255)
                                                     gggCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCATCGCGTCGTGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTtgtg                                                                                                   >  1:1176101/1‑150 (MQ=255)
                                                        ccGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCa                                                                                                >  1:215051/1‑150 (MQ=255)
                                                        ccGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCa                                                                                                >  2:599469/1‑150 (MQ=255)
                                                            gTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTgg                                                                                            >  2:1228894/1‑150 (MQ=255)
                                                             tttCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAACTCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGc                                                                                           <  1:1444800/150‑1 (MQ=255)
                                                             tttCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGc                                                                                           >  2:1303925/1‑150 (MQ=255)
                                                                 aCTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCg                                                                                          <  1:377938/147‑1 (MQ=255)
                                                                 aCTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCg                                                                                          >  2:377938/1‑147 (MQ=255)
                                                                  cTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCgg                                                                                                                                   <  2:965108/105‑1 (MQ=255)
                                                                  cTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCgg                                                                                                                                   >  1:965108/1‑105 (MQ=255)
                                                                   tGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCaaa                                                                                                           <  1:1606927/128‑1 (MQ=255)
                                                                   tGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCaaa                                                                                                           >  2:1606927/1‑128 (MQ=255)
                                                                   tGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATgc                                                                                     >  1:139648/1‑150 (MQ=255)
                                                                             cGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGc                                                                          >  1:1109871/1‑150 (MQ=255)
                                                                             cGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGc                                                                          >  1:744442/1‑150 (MQ=255)
                                                                             cGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGc                                                                          <  1:268818/150‑1 (MQ=255)
                                                                             cGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGAGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGc                                                                          >  2:1402353/1‑150 (MQ=255)
                                                                                  gcgGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGTGTAGTTCAGCCTGaa                                                                     >  2:902311/1‑149 (MQ=255)
                                                                                  gcgGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGAc                                                                    <  1:1430097/150‑1 (MQ=255)
                                                                                      cATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACcaca                                                                >  1:1320820/1‑150 (MQ=255)
                                                                                          ccGGCGGTAAAATCGGCCCAGTGGTATCAGCTGGCGCCCTACCAGAGGGCCTGCACTTGCAACCCCGGCACAGCTGCCCTTCTCTGGTAGCCCAACAACAGCAAACAGTTGTTGCAGTGCGGCATGCGCAGGTCGACCTTCCCACAgcgc                                                            >  2:690300/1‑150 (MQ=255)
                                                                                           cggcggTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCa                                                           <  1:690807/150‑1 (MQ=255)
                                                                                                  aaaaTCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTTAGGTAGCCCAGCAACAGCAAACGGTTGTTTCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCtt                                                    <  1:1179825/150‑1 (MQ=255)
                                                                                                  aaaaTCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAAATGCAAACGGCTGTGTCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCtt                                                    <  1:1180116/150‑1 (MQ=255)
                                                                                                   aaaTCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTg                                                   <  1:1605232/150‑1 (MQ=255)
                                                                                                   aaaGCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGGGCATGGCCTTg                                                   <  1:1000373/150‑1 (MQ=255)
                                                                                                      tCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAAATAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCt                                                >  1:704710/1‑150 (MQ=255)
                                                                                                          cccAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTgccg                                            >  1:1621390/1‑150 (MQ=255)
                                                                                                              gTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAg                                        >  1:938206/1‑150 (MQ=255)
                                                                                                                 gTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTc                                     <  1:1228894/150‑1 (MQ=255)
                                                                                                                  tATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTcc                                    <  1:902311/150‑1 (MQ=255)
                                                                                                                  tATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTcc                                    >  1:1838745/1‑150 (MQ=255)
                                                                                                                       gcgggcgTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACTGTTGTGGCAGTGGAGCCTCCACCCGTTC‑‑CTGGAGCCACAGCGCATGGCCTTGGCTGCCGCCAGTTCcaccac                               >  1:424941/1‑150 (MQ=255)
                                                                                                                         gggcgTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCg                             >  1:1656353/1‑150 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGc                                                                                           <  1:1164251/82‑1 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGc                                                                                           >  2:1164251/1‑82 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGAc                                                                    >  1:456127/1‑103 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGAc                                                                    <  2:456127/103‑1 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTgccgc                                           >  2:1582348/1‑128 (MQ=255)
                                                                                                                                 tccCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTgccgc                                           <  1:1582348/128‑1 (MQ=255)
                                                                                                                                  cccAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGgcgc                    <  1:1394545/150‑1 (MQ=255)
                                                                                                                                     aGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGgcgcagc                 <  1:876555/150‑1 (MQ=255)
                                                                                                                                             tGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACg         <  1:599469/150‑1 (MQ=255)
                                                                                                                                                aCGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACGctc      >  1:1764326/1‑150 (MQ=255)
                                                                                                                                                  gTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTtgtg                                                                                                   <  2:1771655/57‑1 (MQ=255)
                                                                                                                                                  gTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTtgtg                                                                                                   >  1:1771655/1‑57 (MQ=255)
                                                                                                                                                    gCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACGCTCTGGc  >  2:1720423/1‑150 (MQ=255)
                                                                                                                                                    gCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACGCTCTGGc  >  1:1751669/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CCTGCTCGGGTGAACAGCACCATTACGTCTTGCGCGGCCGCTTCAATGGCCTGGGGCCGGGTTTCACTGCTCAGTTCCGGGCGCGGCATGCCGGCGGTAAAATCGGCCCAGTGGTATCGGCGGGCGTCCTCCCAGCGGGCTTGCACGTGCAGCCCCTGCACAGCTGCCCGGCTCAGGTAGCCCAGCAACAGCAAACGGTTGTGGCAGTGGCGTATGCGCAGTTCAGCCTGACCACAGCGCATGGCCTTGGCTGCCGCCAGTTCCACCACCGTGGCGGCGCAGCGCAACACGCTCTGGC  >  NC_002947/3080307‑3080604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: